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IPR035966

Description

IPR035966 is a Phosphofructokinase superfamily.

<p>The enzyme-catalysed transfer of a phosphoryl group from ATP is an important reaction in a wide variety of biological processes [[cite:PUB00004002]]. One enzyme that utilises this reaction is phosphofructokinase (PFK), which catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-bisphosphate, a key regulatory step in the glycolytic pathway [[cite:PUB00014238], [cite:PUB00000020]]. PFK exists as a homotetramer in bacteria and mammals (where each monomer possesses 2 similar domains), and as an octomer in yeast (where there are 4 alpha- (PFK1) and 4 beta-chains (PFK2), the latter, like the mammalian monomers, possessing 2 similar domains [[cite:PUB00000020]]). PFK is ~300 amino acids in length, and structural studies of the bacterial enzyme have shown it comprises two similar (α/β) lobes: one involved in ATP binding and the other housing both the substrate-binding site and the allosteric site (a regulatory binding site distinct from the active site, but that affects enzyme activity). The identical tetramer subunits adopt 2 different conformations: in a 'closed' state, the bound magnesium ion bridges the phosphoryl groups of the enzyme products (ADP and fructose-1,6-bisphosphate); and in an 'open' state, the magnesium ion binds only the ADP [[cite:PUB00003237]], as the 2 products are now further apart. These conformations are thought to be successive stages of a reaction pathway that requires subunit closure to bring the 2 molecules sufficiently close to react [[cite:PUB00003237]].</p> <p>Deficiency in PFK leads to glycogenosis type VII (Tarui's disease), an autosomal recessive disorder characterised by severe nausea, vomiting, muscle cramps and myoglobinuria in response to bursts of intense or vigorous exercise [[cite:PUB00000020]]. Sufferers are usually able to lead a reasonably ordinary life by learning to adjust activity levels [[cite:PUB00000020]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function 6-phosphofructokinase activity Catalysis of the reaction: ATP + D-fructose-6-phosphate = ADP + D-fructose 1,6-bisphosphate.
Biological process Glycolytic process The chemical reactions and pathways resulting in the breakdown of a carbohydrate into pyruvate, with the concomitant production of a small amount of ATP and the reduction of NAD(P) to NAD(P)H. Glycolysis begins with the metabolism of a carbohydrate to generate products that can enter the pathway and ends with the production of pyruvate. Pyruvate may be converted to acetyl-coenzyme A, ethanol, lactate, or other small molecules.

Associated Lotus transcripts 24

Transcript Name Description Predicted domains Domain count
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|A0A151TST4|A0A151TST4_CAJCA ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi1g1v0409800 14
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; TAIR: AT1G76550.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; TrEMBL-Plants: tr|A0A0L9UUG2|A0A0L9UUG2_PHAAN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; Found in the gene: LotjaGi2g1v0011400 13
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; TAIR: AT1G76550.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41140|PFPA_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; TrEMBL-Plants: tr|A0A0L9UUG2|A0A0L9UUG2_PHAAN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha; Found in the gene: LotjaGi2g1v0011400 9
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 13
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 13
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|V7C472|V7C472_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0227800 12
ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1J525|I1J525_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 12
ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1J525|I1J525_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 12
ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|I1N1M0|I1N1M0_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi2g1v0326200 7
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|I1M5F6|I1M5F6_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi3g1v0022100 12
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|I1MCW0|I1MCW0_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi3g1v0022100 13
ATP-dependent 6-phosphofructokinase; TAIR: AT5G47810.1 phosphofructokinase 2; Swiss-Prot: sp|Q9FIK0|PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2; TrEMBL-Plants: tr|V7CAY4|V7CAY4_PHAVU ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0004400 12
ATP-dependent 6-phosphofructokinase; TAIR: AT5G47810.1 phosphofructokinase 2; Swiss-Prot: sp|Q9FIK0|PFKA2_ARATH ATP-dependent 6-phosphofructokinase 2; TrEMBL-Plants: tr|G7ZZU2|G7ZZU2_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0004400 9
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A151SU15|A0A151SU15_CAJCA Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 15
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A151SU15|A0A151SU15_CAJCA Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 15
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A151SU15|A0A151SU15_CAJCA Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 15
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|G7JKF2|G7JKF2_MEDTR Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi4g1v0010600 6
ATP-dependent 6-phosphofructokinase; TAIR: AT2G22480.1 phosphofructokinase 5; Swiss-Prot: sp|Q8VYN6|PFKA5_ARATH ATP-dependent 6-phosphofructokinase 5, chloroplastic; TrEMBL-Plants: tr|G7LJ94|G7LJ94_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0160800 11
ATP-dependent 6-phosphofructokinase; TAIR: AT4G26270.1 phosphofructokinase 3; Swiss-Prot: sp|Q94AA4|PFKA3_ARATH ATP-dependent 6-phosphofructokinase 3; TrEMBL-Plants: tr|G7L7C4|G7L7C4_MEDTR ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi4g1v0443300 13
ATP-dependent 6-phosphofructokinase; TAIR: AT5G61580.1 phosphofructokinase 4; Swiss-Prot: sp|Q9FKG3|PFKA4_ARATH ATP-dependent 6-phosphofructokinase 4, chloroplastic; TrEMBL-Plants: tr|I1LCJ1|I1LCJ1_SOYBN ATP-dependent 6-phosphofructokinase; Found in the gene: LotjaGi5g1v0257100 12
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|I1KZW7|I1KZW7_SOYBN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 15
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|I1KZW7|I1KZW7_SOYBN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 15
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q8W4M5|PFPB1_ARATH Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta 1; TrEMBL-Plants: tr|I1KZW7|I1KZW7_SOYBN Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 15
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TAIR: AT1G12000.1 Phosphofructokinase family protein; Swiss-Prot: sp|Q41141|PFPB_RICCO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; TrEMBL-Plants: tr|A0A0B2S9A2|A0A0B2S9A2_GLYSO Pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta; Found in the gene: LotjaGi6g1v0289400 6

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
SSF53784 SUPERFAMILY 1 4.17