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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0039500 |
| Transcript ID | LotjaGi4g1v0039500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-ureidopropionase; TAIR: AT5G64370.1 beta-ureidopropionase; Swiss-Prot: sp|Q8H183|BUP1_ARATH Beta-ureidopropionase; TrEMBL-Plants: tr|I3SXB3|I3SXB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0039500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4706080..4709437) extracted from Lotus japonicus Gifu genome v1.2.
CTTCACAACGTTATATTGTCAACGACTGCTTGAATTTTTATCACCCTAAAAAAATGAAAAAAAAAATTATAAGGAAATTT AGAAAACTCTAAGCATGGATCTGAGAAAGTGAAAAAAAGAAGAAAGAATGTAAAACAACATTTGCATCAAGTAGAACCAT ATATCTCTATAGTATATGATTGAGATTCTTAAAACTTGGAATAGACCAAAGCTGACTGATTCTTGCTATGAGTTTCACAT CCTTTCCAAATCTGACGCTTTTGATATTTTCACACTAAGAAGCTATTGAGTTAGCTGTTTTTTGAAAAATCAAGTTGTAG AGAATAACCAAAAAAAAAAATAAACTGGTGAAAGAAAATTTGTTAGCTAACTTTTTTTTGCACTACCTTAATGACCCGTG ACTCATTCACGTTACATATTGGGCATGTTTAAAGAAATAGCAAAGTCAAAATTGAGTTTGCTCTATTAATTTTTTCCAGA ATTAAATATGTAACGTAATAGTTATTTCTTTTTTTTAAGTATATATTGATTATCTTGCGTATTCCAATCAGCAATCAGCA ATCAGCAATCAGCAATCACTCTGTTCGATCGACGGAAGAAGGTGGAAGATGGAGAAGAGCACCCAAAACGGAGCAGTGAA AGAAGAACAACCCAAGTCCTCCGGCGACGCTTCTGTCTGTGGCTACGACTCTCTTCACCATCTTCTCAAGGATAATCTCA AACCCCATCACTATCAGGTGCTTGCTTGCTTTCAATTTCAATTTCAAATCAATTGAATTCATTCATGTTCTATTAATTTA GGTTGATATGGGATTGTATATGTATATGTTCATTCTAAAATTGGCTTAATGCATTCATTGGTGCAGGAAGTCAACCGCTT GCTTACTGGGCTTAATTGTGGAAAACCACTTGACACAATTGTTCTCCCAGAATCTGCTACAGATCTGTCTGTGCAACATG GTTTTGACCTCCAGGTGAAATACAATTTACTTTTCCATGTATGAAGATGATTCTCTTTTTTCTGAAACAAATATTGCATT ATTAACTTGTTAGATCTTTCTTTTCTTCTTGTCTGGCTGTTGTCTGTTAAATCATTGTTGGAATCTATTAGCTCTTATTA GTTAAATGAGATGGCTTTACTTTAGTCCTTTAGTTAACCATGGCTTCTTTCTCCAAGATAGAAACTCTACCAGTTAGTTA TTTATGCAGTTTCTGATTGATAATGATTTTAAGTTGATTCCTTTCAGGCTTATTCCTTTCATGCTGAAAAAGAGCTATTA AGAGAACCTCGAATTGTGAGGGTTGGTTTGATTCAAAACTCTATTGCCCTTCCAACAACTGCTCACTTTGCTGACCAGAA AAAGGCTCTATTTGAGAAAGTAAAGCCAATCATTGATGCTGCTGGTTCTTCAGGGGTCAACATATTATGCTTGCAAGTAG GTGGTTACATAAGTATCAACATTTATTTATCTATTGATTTCAGACTTTGGTATGAAAATATTAAATGTTTTCATATAATG GCATTGTGTAGGAAGCATGGATGATGCCATTTGCCTTTTGTACAAGAGAGAAGAGATGGTGTGAATTTGCAGAACCTGTT GATGGGGAATCAACACAATTTTTGCAAAGCTTTGCTCTTAAATATAACATGGTGATCATAAGTCCAATACTCGAGAGGGA CATGAACCATGGAGAGGTTATCTGGAACACTGTTGTTGTAATTGGAAATCATGGCAATATAATTGGAAAGCACAGGAAGG TAAATTCCCTTAGCTTTGCTGCATCTATTTTTAACTTACAGCTTCTCTTTCAGTTATCTTATGAACACAAAACATTTGAC AGAACCATATACCAAGAGTTGGGGACTTCAATGAGAGTACATATTATATAGAAGGAAATACTGGCCATCCTGTATTTGAA ACGCAATTTGGAAAGATTGGCATTAATATATGCTATGGCAGGCACCATCCTTTAAATTGGTTAGCCTTCGGCTTGAATGG TGCAGAGATTGTCTTCAACCCTTCTGCCACAGTGGGTGAACTTAGCGAACCAATGTGGTCAATAGAGGTTAGTTATTTTA TAATGATTAAAGACACTAGACTCTCTTCAACTAATTCTTGTTTCTGGTGCTTAGATTGAACATGGATCTTTTTTGATGGG TTTAGGTTGCTATTGAATATAGTTATGATTTGATGCTAATGCTTATAGGTTGATATTTAGCATGAAATTTGTCATGAATC AACTATTCCAAAAGCTAAAGTTGTTGGATGAAGGCACATTAATGATTTTATATAATGTTTCTAATACATCCCTATGCATG ATCATATATTACGTTTTAAAAAAGTGTTATTTTATTTCAGGCGCGTAACGGTGCAATAGCAAATAGTTACTTTGTTGCTG CAATCAATCGCGTTGGGACTGAGACATTCCCCAATGCATTTACTTCTGGGGATGGAAAGCCAGCACATGCAGATTTTGGG CACTTTTATGGATCCAGTTATGTTGCAGCACCAGATGCATCGTGCACACCATCTTTGTCTCGAAATCGGGATGGCTTGTT AGTAACAGATATGGATCTTAACTTATGTAGGCAGGTGAAAGACAAGTGGGGTTTCAGAATGACTGCGCGATACGAGTTAT ATGAAGAGACACTCGCCAACTATATGAAACCAGACTTTGAGCCCCAAATCATCGGTGACCCCTTATTGCACAAGAAGTCT TCATAAGTCGCCACTTGTATGCTGATGGATTGATGCTCCTAAGTCCTAACTTTACTCAAGTCCCTTTATATTGTAATTGT GACCACTTCCAAGAATGAAAATTACTCTTCACATTCACCAAACCCGCTGGATGCCTCACACGTTTCTTTTTAATTTTTAT AAATACTATACAACACTTTTAATTTAAAAATATAAGGTTTTATCATTCTTTCACTTCCCATTTAAAATCCCCAATCTAAG TTGAAGTCAATGGAATAGGCCAAAGGACTGATTTAGAATTAGAATTTGAAAAAAAAAATACAGGATGAAAACATGCTTTG TGCAACATCTCAATACCCTAAACCCTAATTTCCCCTCGTGATGCCATAAAAAGTGCATTTATACCACAAAACTTACAAAT GCAAGATATCAATCTTGCAACATCTCAAAATTAGTCATTTCTCCATTTCTATATGAGGAGGGTAAGAGAAAAGGAGTGAC AATATTTATCAGTGCTACTTTTTTGTGTCATAGGCAGCTATATTCTGGGGCTCACGTTTAGGACTAAACAAACGAACCCG CAAAGCTGTGCTTGAGCTCATAGTTACAGCTCCACACGCTGCCCAACGAAGACTCCTAGGAATTGTAATCCGATGACC
CDS sequence (LotjaGi4g1v0039500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGAGCACCCAAAACGGAGCAGTGAAAGAAGAACAACCCAAGTCCTCCGGCGACGCTTCTGTCTGTGGCTACGA CTCTCTTCACCATCTTCTCAAGGATAATCTCAAACCCCATCACTATCAGGAAGTCAACCGCTTGCTTACTGGGCTTAATT GTGGAAAACCACTTGACACAATTGTTCTCCCAGAATCTGCTACAGATCTGTCTGTGCAACATGGTTTTGACCTCCAGGCT TATTCCTTTCATGCTGAAAAAGAGCTATTAAGAGAACCTCGAATTGTGAGGGTTGGTTTGATTCAAAACTCTATTGCCCT TCCAACAACTGCTCACTTTGCTGACCAGAAAAAGGCTCTATTTGAGAAAGTAAAGCCAATCATTGATGCTGCTGGTTCTT CAGGGGTCAACATATTATGCTTGCAAGAAGCATGGATGATGCCATTTGCCTTTTGTACAAGAGAGAAGAGATGGTGTGAA TTTGCAGAACCTGTTGATGGGGAATCAACACAATTTTTGCAAAGCTTTGCTCTTAAATATAACATGGTGATCATAAGTCC AATACTCGAGAGGGACATGAACCATGGAGAGGTTATCTGGAACACTGTTGTTGTAATTGGAAATCATGGCAATATAATTG GAAAGCACAGGAAGAACCATATACCAAGAGTTGGGGACTTCAATGAGAGTACATATTATATAGAAGGAAATACTGGCCAT CCTGTATTTGAAACGCAATTTGGAAAGATTGGCATTAATATATGCTATGGCAGGCACCATCCTTTAAATTGGTTAGCCTT CGGCTTGAATGGTGCAGAGATTGTCTTCAACCCTTCTGCCACAGTGGGTGAACTTAGCGAACCAATGTGGTCAATAGAGG CGCGTAACGGTGCAATAGCAAATAGTTACTTTGTTGCTGCAATCAATCGCGTTGGGACTGAGACATTCCCCAATGCATTT ACTTCTGGGGATGGAAAGCCAGCACATGCAGATTTTGGGCACTTTTATGGATCCAGTTATGTTGCAGCACCAGATGCATC GTGCACACCATCTTTGTCTCGAAATCGGGATGGCTTGTTAGTAACAGATATGGATCTTAACTTATGTAGGCAGGTGAAAG ACAAGTGGGGTTTCAGAATGACTGCGCGATACGAGTTATATGAAGAGACACTCGCCAACTATATGAAACCAGACTTTGAG CCCCAAATCATCGGTGACCCCTTATTGCACAAGAAGTCTTCATAA
Protein sequence (LotjaGi4g1v0039500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKSTQNGAVKEEQPKSSGDASVCGYDSLHHLLKDNLKPHHYQEVNRLLTGLNCGKPLDTIVLPESATDLSVQHGFDLQA YSFHAEKELLREPRIVRVGLIQNSIALPTTAHFADQKKALFEKVKPIIDAAGSSGVNILCLQEAWMMPFAFCTREKRWCE FAEPVDGESTQFLQSFALKYNMVIISPILERDMNHGEVIWNTVVVIGNHGNIIGKHRKNHIPRVGDFNESTYYIEGNTGH PVFETQFGKIGINICYGRHHPLNWLAFGLNGAEIVFNPSATVGELSEPMWSIEARNGAIANSYFVAAINRVGTETFPNAF TSGDGKPAHADFGHFYGSSYVAAPDASCTPSLSRNRDGLLVTDMDLNLCRQVKDKWGFRMTARYELYEETLANYMKPDFE PQIIGDPLLHKKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 22 | 22 | - | – | |
| Gene3D | 22 | 407 | 386 | 3.8E-160 | ||
| PANTHER | 25 | 406 | 382 | 1.8E-214 | – | |
| PANTHER | 25 | 406 | 382 | 1.8E-214 | – | |
| SUPERFAMILY | 92 | 382 | 291 | 2.75E-65 | ||
| ProSiteProfiles | 96 | 366 | 271 | 52.197 | ||
| Pfam | 98 | 373 | 276 | 3.0E-57 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. |
Expression pattern of LotjaGi4g1v0039500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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