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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0039500 |
| Transcript ID | LotjaGi4g1v0039500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-ureidopropionase; TAIR: AT5G64370.1 beta-ureidopropionase; Swiss-Prot: sp|Q8H183|BUP1_ARATH Beta-ureidopropionase; TrEMBL-Plants: tr|I3SXB3|I3SXB3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0039500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:4707048..4708805) extracted from Lotus japonicus Gifu genome v1.2.
CTCCAGGTGAAATACAATTTACTTTTCCATGTATGAAGATGATTCTCTTTTTTCTGAAACAAATATTGCATTATTAACTT GTTAGATCTTTCTTTTCTTCTTGTCTGGCTGTTGTCTGTTAAATCATTGTTGGAATCTATTAGCTCTTATTAGTTAAATG AGATGGCTTTACTTTAGTCCTTTAGTTAACCATGGCTTCTTTCTCCAAGATAGAAACTCTACCAGTTAGTTATTTATGCA GTTTCTGATTGATAATGATTTTAAGTTGATTCCTTTCAGGCTTATTCCTTTCATGCTGAAAAAGAGCTATTAAGAGAACC TCGAATTGTGAGGGTTGGTTTGATTCAAAACTCTATTGCCCTTCCAACAACTGCTCACTTTGCTGACCAGAAAAAGGCTC TATTTGAGAAAGTAAAGCCAATCATTGATGCTGCTGGTTCTTCAGGGGTCAACATATTATGCTTGCAAGTAGGTGGTTAC ATAAGTATCAACATTTATTTATCTATTGATTTCAGACTTTGGTATGAAAATATTAAATGTTTTCATATAATGGCATTGTG TAGGAAGCATGGATGATGCCATTTGCCTTTTGTACAAGAGAGAAGAGATGGTGTGAATTTGCAGAACCTGTTGATGGGGA ATCAACACAATTTTTGCAAAGCTTTGCTCTTAAATATAACATGGTGATCATAAGTCCAATACTCGAGAGGGACATGAACC ATGGAGAGGTTATCTGGAACACTGTTGTTGTAATTGGAAATCATGGCAATATAATTGGAAAGCACAGGAAGGTAAATTCC CTTAGCTTTGCTGCATCTATTTTTAACTTACAGCTTCTCTTTCAGTTATCTTATGAACACAAAACATTTGACAGAACCAT ATACCAAGAGTTGGGGACTTCAATGAGAGTACATATTATATAGAAGGAAATACTGGCCATCCTGTATTTGAAACGCAATT TGGAAAGATTGGCATTAATATATGCTATGGCAGGCACCATCCTTTAAATTGGTTAGCCTTCGGCTTGAATGGTGCAGAGA TTGTCTTCAACCCTTCTGCCACAGTGGGTGAACTTAGCGAACCAATGTGGTCAATAGAGGTTAGTTATTTTATAATGATT AAAGACACTAGACTCTCTTCAACTAATTCTTGTTTCTGGTGCTTAGATTGAACATGGATCTTTTTTGATGGGTTTAGGTT GCTATTGAATATAGTTATGATTTGATGCTAATGCTTATAGGTTGATATTTAGCATGAAATTTGTCATGAATCAACTATTC CAAAAGCTAAAGTTGTTGGATGAAGGCACATTAATGATTTTATATAATGTTTCTAATACATCCCTATGCATGATCATATA TTACGTTTTAAAAAAGTGTTATTTTATTTCAGGCGCGTAACGGTGCAATAGCAAATAGTTACTTTGTTGCTGCAATCAAT CGCGTTGGGACTGAGACATTCCCCAATGCATTTACTTCTGGGGATGGAAAGCCAGCACATGCAGATTTTGGGCACTTTTA TGGATCCAGTTATGTTGCAGCACCAGATGCATCGTGCACACCATCTTTGTCTCGAAATCGGGATGGCTTGTTAGTAACAG ATATGGATCTTAACTTATGTAGGCAGGTGAAAGACAAGTGGGGTTTCAGAATGACTGCGCGATACGAGTTATATGAAGAG ACACTCGCCAACTATATGAAACCAGACTTTGAGCCCCAAATCATCGGTGACCCCTTATTGCACAAGAAGTCTTCATAA
CDS sequence (LotjaGi4g1v0039500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCCATTTGCCTTTTGTACAAGAGAGAAGAGATGGTGTGAATTTGCAGAACCTGTTGATGGGGAATCAACACAATT TTTGCAAAGCTTTGCTCTTAAATATAACATGGTGATCATAAGTCCAATACTCGAGAGGGACATGAACCATGGAGAGGTTA TCTGGAACACTGTTGTTGTAATTGGAAATCATGGCAATATAATTGGAAAGCACAGGAAGAACCATATACCAAGAGTTGGG GACTTCAATGAGAGTACATATTATATAGAAGGAAATACTGGCCATCCTGTATTTGAAACGCAATTTGGAAAGATTGGCAT TAATATATGCTATGGCAGGCACCATCCTTTAAATTGGTTAGCCTTCGGCTTGAATGGTGCAGAGATTGTCTTCAACCCTT CTGCCACAGTGGGTGAACTTAGCGAACCAATGTGGTCAATAGAGGCGCGTAACGGTGCAATAGCAAATAGTTACTTTGTT GCTGCAATCAATCGCGTTGGGACTGAGACATTCCCCAATGCATTTACTTCTGGGGATGGAAAGCCAGCACATGCAGATTT TGGGCACTTTTATGGATCCAGTTATGTTGCAGCACCAGATGCATCGTGCACACCATCTTTGTCTCGAAATCGGGATGGCT TGTTAGTAACAGATATGGATCTTAACTTATGTAGGCAGGTGAAAGACAAGTGGGGTTTCAGAATGACTGCGCGATACGAG TTATATGAAGAGACACTCGCCAACTATATGAAACCAGACTTTGAGCCCCAAATCATCGGTGACCCCTTATTGCACAAGAA GTCTTCATAA
Protein sequence (LotjaGi4g1v0039500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMPFAFCTREKRWCEFAEPVDGESTQFLQSFALKYNMVIISPILERDMNHGEVIWNTVVVIGNHGNIIGKHRKNHIPRVG DFNESTYYIEGNTGHPVFETQFGKIGINICYGRHHPLNWLAFGLNGAEIVFNPSATVGELSEPMWSIEARNGAIANSYFV AAINRVGTETFPNAFTSGDGKPAHADFGHFYGSSYVAAPDASCTPSLSRNRDGLLVTDMDLNLCRQVKDKWGFRMTARYE LYEETLANYMKPDFEPQIIGDPLLHKKSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 261 | 261 | 7.5E-165 | – | |
| PANTHER | 1 | 261 | 261 | 7.5E-165 | – | |
| ProSiteProfiles | 1 | 221 | 221 | 44.193 | ||
| Gene3D | 1 | 262 | 262 | 1.2E-116 | ||
| SUPERFAMILY | 7 | 245 | 239 | 3.4E-57 | ||
| Pfam | 9 | 228 | 220 | 5.8E-51 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Nitrogen compound metabolic process | The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen. |
Expression pattern of LotjaGi4g1v0039500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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