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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0068300 |
| Transcript ID | LotjaGi4g1v0068300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT3G59690.1 IQ-domain 13; Swiss-Prot: sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14; TrEMBL-Plants: tr|G7JNM9|G7JNM9_MEDTR IQ calmodulin-binding motif protein; Found in the gene: LotjaGi4g1v0068300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:8585922..8589818) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAAAGAAGGGGAGTTGGTTTGCTGCAATCAAGAGGGTGTTCACACATCACTCCAAGGGGAAGGTAGGTAGTTAATG CAAATTTCTTCCTTCCTGTAAAGAGAAATGTGAAATTCTTGTTATGTTGTTGTTTTTGGTTATGTTTTTCATTTGGCATC CTCATCAAATGTCAAACCCGTTTAATAGCCTGTTTGGATGCTTGTTGTGAATGTCATAATTCATTCTTCATTTTCAAAAT CAACATTTTAGTGTTTGGATATTTTCTTTGACAATGAATTCTAGCTCGAAAATCAATTTTTGGATGAAACTACCAAACCT TAGCTTCTGCAATGGATAATAATCAATTGTAGGAGTAGTAGGATTTCACAACCTTACCTTAGGAAAATCATTTTCATTGT AATTGTATTATGTATCTGAAAATCACTTTCATTGTAATATACTACTTCATTTTCAACTCACTTTATCACATCAATTGTAA CAAAATCAATTATCACAATACTGATCCAAAATGCAAAGAGGATAAAGTCACAGTGAATAATTTTGTTGAAAATTTAGTGA TAGTGAACTGTTATGGACAGATCTGTGGAAGAATTAAAAAATTCATTCTTCTGGTTGACAAGCATTATAGATGTATGATA ATGTTTCACATCTTACAACATACCTGTAAAATATAAATTAGGTTCCTTCATAAATAGTAATAGATTATTTGAAATATTGC AAAGTTATCTAGGAGGTTACTTGCCATTCATCCAAACACTCTGACATTATATTGCTTTCTGCATTAGTTTTAAGTTATTT TGCCCTTTTTCTCTGAACTTTGAATCAGGAAGCAACTTCTACATGATGATGATTATTTTATGTGGAAGCCAGTGTTTGCA TGACTCTTACTTTAAAGTTACAGCAAGTTTTGCTACCAGTTTGAACTTGTTTGAGTTTCTACTCATCTGATATATCTAAT CATTTTTATCAATATAGCAGGATTCAGATAGTAAAAACTCAAAAGAGAAGAAGAAAGGTGTAGGAAAACAAAGGCATGGA GAGACCAATTCTTTCATCCCCATCTTCAGGGAGCCAAGTAGCATTGAGAAAATATTTGGGGACTTCGAAAGAGAGCAACA ACAGATACTCACGATTAGGCCTCCCACGCCTCCTGAGCAACCCAAAACGCCACCTTTTGTCCCGCCTCGAGCTGCTTCTC CCAGGGCTCCTTCTCCAAAGGCTCCATCTCCAAGGGCTGCGTCTCCCAGGTCTCCTTCTCCGCGAGTTACATCTCCCAAA GCTGCTTCTTCCCGTATCGTTCATCACCACAAGGAGGTTGGCTACAGACCAGAACCAACTCTAAAGAACCAACAGGCCTC AGCTACTAAGATCCAGGCTGTTTATAGAGGTTATATGGTAAGTTTTTATGTTTTTCTTGTGAATGCCTTGTTTTCTCAAT TTAGGCCTTTTAAGCAGTGCCCGTAGAGACATGTTACGAAACTAGATTAGAAACCATACAATGTAAAGAAGTATTTAATA TCTTAAAAATCTACATAGCATTGCTCCATTTGGAAGTGCTTATGCAAGTGTTTGAGAGAGCCTATGTAAATAGCTTATAT CTACCTATAAACTGTTTTCAGCTTACTTCCATAAGCTGCTCAGACTAGCTTATGAATAAGCACTTATACATCCCTAAAAC CTAGTTTGAGCACATTTCAAAAAGCTTGTCGAGATAGCTTATGAATAAGCGCTTATGGCCTTATTTCCATAAGCGCTTAA TTAATTTTTTTACCCAAACACGGATCATTGTAAGCAGTACTTTTTTCAATCATGAAAATTAAGAGCCTGAATAGGCTGAT TATTGTGCCATTTACCTTGAAAACATGAATGGGTCGGTATTTGCATGCAGGATTCCTCCTTAATCCATTAATTTTAGCTT ATTTTCATTGATATGAAACAAAATTCACCTTCTGTTATGTGGTGCTTGCATTACAGGCTAGGAGGAGTTTTAGAGCTCTA AAGGGTCTGGTTAGACTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCAGACAGTTAATGCTATGAAACACATGCA GCTTTTGGTGCGAGTTCAATCTCAGATCCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCCGAGT TCAAGAATGATAAGGATGCTGCAAGTACCTTTGGCAAACGCACTTTAGGACATGGTGTAAGCCCTCTAAACTAAGAAAAT TGTTGTGAACATGGGGAAATGAATATATGTATGTAACATGTCACTTGTGTTGATAGCAGAAAGTTCAACTGCCTGCAGCC ATGTAAGCAGGAACTAACTAACTAACTATGGATTTGGTGTCTATTAACTACTTGTTGCTAGCTTAAGCACTTCAAAATCA AAGGATTAAATACCTTTGTCTTTCTGCTGTTGCCTTATTGGGAAAGGTCTGTTTTTTTATACTTTATAATCCAGAGATTG TGCAAACACAACATGATCTATTCTACGATAGATGATCATGCTCTTTCTTTATGATGTCCATCATAAAGTGAGTAACTTTG TGTTATGTTAATCAGTAACTTGAAAAACCATTGTAGATTCTAATAAAATCCACTATGTGCATGCATGTATGTATGCCCAA CTTCCTTTATCTTCATGAAAATTCAAAGCGAGTGATATTGACAATTTGGAATTTTGGTGCAGTCTGAGGCAGGTAACAAT GAAGAGTGGGATGATAGCATACTGAAAAAAGAGGAAGTAGATGCAAGGTTGCAGAGGAAAGTGGAAGCAATGATCAAAAG GGAAAGAGCAATGGCATTTGCATATTCACATCAGGTACTCACCAACACAGCCCTCACTTTTCAGACATGCTTTACCTTTT ATACAACAAAATTCATCATCAAAGAGAAAAAGGAAACTTCCTACATATTGGTTTCTTTTCCCCCTTTTGAATTGGAACAT GAGCATGTGTTTTATGCCCTCTTCTTGCTTCATTCTTTTAAATTACATATTTGATTTCAAATTTCCATTGGAAATTTGGA ATGTTAAATCTCTATTTGCTGTAACTTTATTCACTCTGCCATCAGTTGTGGAAAGCCACCCCAAAATCAACACAGACACC GGTGACCGATACGCGATCCGGCGGATTTCCGTGGTGGTGGAACTGGTTAGAAAGACAACTACCTGCAGCAAATCCACAAG AAAAACAAATCCTGAAGAATTTCCAACTCACACCTTCAAGACCATATTCAGAACAGAAAACTAGTCCAAGGCCTGGATCA AGCACTCCAAGACAGCACAATTTCGCCTTTGATAACATGGACACTCCCACTCCAAAATCCACAAAATCAACCATTCTTAC ATCTTCAAAACCTGCTAGAACTCCTCCATATAGAACTCCTCAAGCAAAACATCCAAGGTCAAGGGCTCTGGGAGCCAAGT CACCTTTCGACGTGCCGCTGAGGGATGATGACAGCCTCACAAGCTGCCCGCCGTTTTCAGTGCCGAGCTATATGGCTCCG ACTGTTTCTGCACAGGCCAAAGTACGCGCTAATAGTAATCCCAGAGAAAGGTTTGGTGGAAGCGTTGGTGGTGGTACTCC TAGCAGTGATTCAAAAAGGAGACTTTCATTCCCTTTGTCCCAAGGAATTGGATCTTTTAAATGGACTAAAGGGTCCTTGT TCTCTAGCAAGGTTCCTAACTCTCAAAGGACACCAGACAATAATAAGTTTCAGACACTTGAATCAATAGGAAACGTGAGT GTGGATTCAACATTATCTTTGCCTGCAAGGGTGGGAAGAAAGCCATTTACAAGATTTGTGTGATTCTGTTTTTTCTTTTT TTATAATTTTTAACCATTTTGTTTTGTTCATGTTGGTGGTGGTGTTATCAGTTATGA
CDS sequence (LotjaGi4g1v0068300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAGAAGGGGAGTTGGTTTGCTGCAATCAAGAGGGTGTTCACACATCACTCCAAGGGGAAGGATTCAGATAGTAA AAACTCAAAAGAGAAGAAGAAAGGTGTAGGAAAACAAAGGCATGGAGAGACCAATTCTTTCATCCCCATCTTCAGGGAGC CAAGTAGCATTGAGAAAATATTTGGGGACTTCGAAAGAGAGCAACAACAGATACTCACGATTAGGCCTCCCACGCCTCCT GAGCAACCCAAAACGCCACCTTTTGTCCCGCCTCGAGCTGCTTCTCCCAGGGCTCCTTCTCCAAAGGCTCCATCTCCAAG GGCTGCGTCTCCCAGGTCTCCTTCTCCGCGAGTTACATCTCCCAAAGCTGCTTCTTCCCGTATCGTTCATCACCACAAGG AGGTTGGCTACAGACCAGAACCAACTCTAAAGAACCAACAGGCCTCAGCTACTAAGATCCAGGCTGTTTATAGAGGTTAT ATGGCTAGGAGGAGTTTTAGAGCTCTAAAGGGTCTGGTTAGACTTCAAGGAGTGGTAAGAGGACAGAATGTGAAGAGGCA GACAGTTAATGCTATGAAACACATGCAGCTTTTGGTGCGAGTTCAATCTCAGATCCAGTCTCGAAGGATCCAGATGTTGG AAAACCAGGCACGATATCAAGCCGAGTTCAAGAATGATAAGGATGCTGCAAGTACCTTTGGCAAACGCACTTTAGGACAT GGTTCTGAGGCAGGTAACAATGAAGAGTGGGATGATAGCATACTGAAAAAAGAGGAAGTAGATGCAAGGTTGCAGAGGAA AGTGGAAGCAATGATCAAAAGGGAAAGAGCAATGGCATTTGCATATTCACATCAGTTGTGGAAAGCCACCCCAAAATCAA CACAGACACCGGTGACCGATACGCGATCCGGCGGATTTCCGTGGTGGTGGAACTGGTTAGAAAGACAACTACCTGCAGCA AATCCACAAGAAAAACAAATCCTGAAGAATTTCCAACTCACACCTTCAAGACCATATTCAGAACAGAAAACTAGTCCAAG GCCTGGATCAAGCACTCCAAGACAGCACAATTTCGCCTTTGATAACATGGACACTCCCACTCCAAAATCCACAAAATCAA CCATTCTTACATCTTCAAAACCTGCTAGAACTCCTCCATATAGAACTCCTCAAGCAAAACATCCAAGGTCAAGGGCTCTG GGAGCCAAGTCACCTTTCGACGTGCCGCTGAGGGATGATGACAGCCTCACAAGCTGCCCGCCGTTTTCAGTGCCGAGCTA TATGGCTCCGACTGTTTCTGCACAGGCCAAAGTACGCGCTAATAGTAATCCCAGAGAAAGGTTTGGTGGAAGCGTTGGTG GTGGTACTCCTAGCAGTGATTCAAAAAGGAGACTTTCATTCCCTTTGTCCCAAGGAATTGGATCTTTTAAATGGACTAAA GGGTCCTTGTTCTCTAGCAAGGTTCCTAACTCTCAAAGGACACCAGACAATAATAAGTTTCAGACACTTGAATCAATAGG AAACGTGAGTGTGGATTCAACATTATCTTTGCCTGCAAGGGTGGGAAGAAAGCCATTTACAAGATTTTTATGA
Protein sequence (LotjaGi4g1v0068300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKKGSWFAAIKRVFTHHSKGKDSDSKNSKEKKKGVGKQRHGETNSFIPIFREPSSIEKIFGDFEREQQQILTIRPPTPP EQPKTPPFVPPRAASPRAPSPKAPSPRAASPRSPSPRVTSPKAASSRIVHHHKEVGYRPEPTLKNQQASATKIQAVYRGY MARRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKDAASTFGKRTLGH GSEAGNNEEWDDSILKKEEVDARLQRKVEAMIKRERAMAFAYSHQLWKATPKSTQTPVTDTRSGGFPWWWNWLERQLPAA NPQEKQILKNFQLTPSRPYSEQKTSPRPGSSTPRQHNFAFDNMDTPTPKSTKSTILTSSKPARTPPYRTPQAKHPRSRAL GAKSPFDVPLRDDDSLTSCPPFSVPSYMAPTVSAQAKVRANSNPRERFGGSVGGGTPSSDSKRRLSFPLSQGIGSFKWTK GSLFSSKVPNSQRTPDNNKFQTLESIGNVSVDSTLSLPARVGRKPFTRFL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 130 | 130 | - | – | |
| PANTHER | 3 | 527 | 525 | 3.4E-208 | – | |
| PANTHER | 3 | 527 | 525 | 3.4E-208 | – | |
| MobiDBLite | 16 | 40 | 25 | - | – | |
| MobiDBLite | 76 | 111 | 36 | - | – | |
| Gene3D | 131 | 166 | 36 | 3.4E-6 | – | |
| SMART | 145 | 167 | 23 | 2.4E-5 | ||
| ProSiteProfiles | 146 | 174 | 29 | 10.969 | ||
| Pfam | 148 | 167 | 20 | 3.6E-6 | ||
| MobiDBLite | 331 | 406 | 76 | - | – | |
| MobiDBLite | 331 | 385 | 55 | - | – | |
| Pfam | 376 | 472 | 97 | 7.2E-8 | ||
| MobiDBLite | 440 | 463 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0068300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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