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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0073200 |
| Transcript ID | LotjaGi4g1v0073200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | PP2A regulatory subunit TAP46; TAIR: AT5G53000.1 2A phosphatase associated protein of 46 kD; Swiss-Prot: sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46; TrEMBL-Plants: tr|A0A151RZR7|A0A151RZR7_CAJCA PP2A regulatory subunit TAP46; Found in the gene: LotjaGi4g1v0073200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:9335911..9343536) extracted from Lotus japonicus Gifu genome v1.2.
CCAGGATGTGTTGGTTAGCGTATTGGTAGTTCTAAAAAGGAGCGGCAAAGAGTTGGTATAAGAATCTCAAAGAGTTTTCC TCTTCCCTGGATCAGTCTCGCATCTTTGGAGTCTTTGTCCTTGCCACTAATATGGGTCATTTGTTCTATTTTTAGTTGAG TTGAATATAGAGTGCTGCCTCATCCTTACGTTCTTTTGCCAAAAATAGGTGCAGGAGAAGAATATCATTAGGATCTTAGG ACAGAATAGATAGCTTTGACATTTCACTTGAAAAGCATAAGGGAGATGTACGTCTTCCATATAGGTGCTTAACTGCTTAT GGTAATGGGATTAAGTCTCTGCTATATTAATATAGTTTCTTTTTTGTTTAATTGTTTGGTTTCATTGTAATATATTCCTG TGTCTTTCTCTTTACAGTATGCTCTATGAAAATTGTACCATGAAAGTTCATTGCAATTGCACAGACCAGGTGTACAACAT ATTGCCACTCTTTTATAACCGTGGCAATAGGGTCCGCAACTTGACCGTGGCAATAGAGGTCACATATTGCCACGGTTACA CGCTTGACCGTGGCCATATGTGGACTCTATTGCCACGGTTAAGTGTGTAACCGTGGCAATATGCGGACTTTATTGCCACG GTTACCCTTTACAAACTGTGGTAATAGGCGAATCAATTGCCACGGTTCGCCCTTGAACCGTGGCAATAGAGCAATTGCCA CGCACGCTATCGCCACGGTTTAACCGTGGCTAAAGGGCGTGCGGAACCGTGGCGAAAAGCCTTTTCTGTAGTAGTGAATT TAGTCACTATTGCAAATGATATTAGTAACGATTTATAATTTTGTCACTATTGCAGATAGTATTAGTGGCGATAAATAATT TGGTCACTCTTACGAATAGTACTAGTGACGATTTATAATTTGGTCACTTTCGCGAATAGTACTAGTGACGATTTATAATT TGGTCATTATTGCAGAGAGCATTAGTGACGATTAATACTTTAGCCACTATTGCGAATAACATTAGTGACGATTTATAATT ATGTCACTATTGCGAATAGTATTAGTGGTGATTTATAATTTGGTCACTATTATGAATGGTATTAGTGACGATTTATAATT TGGTCACAGTTACAAACAGTTTTAGTGACGAAATTGAAAATAGCCACAAATAATATACATTTAGTGACAAAATTAATAAT CGTCACTTATATTATGTCACTAAAAACATTATTTCTTATAGTGACTGGCGCTCCTGGGCGAGGGACCCTGGGGTCTCGCC CAGTCCAATCTCTAATTGTAAAAATTCATTCAAAGCAAACTAAGCTTATTTACAACAACAATTTGCTTCCTTAATTAGGG GCTAACCAAAGCTTGTACAACAACTTATATCATTTCTCATCACACTCTAAGTCATCATCCTCATGGAAATCACCACTCCT TTAAGTTTTCCAAGCCTATTTACAACAATCCTAAGATCACAAAACTAGACATGCTTGGTGCAACTAAACTTTCATTCGAA ATTCATATACCCAACCTCTAAAATTATGTTTTTCATGTAATAAGTCATTAATCTAAGCTTAGAAATGAATTATGGAAGGT TAGGTACCTTTGAAACGCAATTCTGAAACTTTTTCTGAATAGAGCTGCCAGAGAAGATGAAGACTTAGTGGTGGACTTCA TCGGCGATGAACAAGTGGTTGTACAACAATCTACTCACTTCTAGAAGAACAACAGTGGGCAAATCGTTATGATCAGAGTC TAGAAGTTATGGCTGCCTTCAAGAATATAAAACCAAAATCCTTCAAAAGGCACTCAGGATCTTTCCAAAATCTTCAAATT CACTCCACTCACTTCCAGAAACACGTTTCAATAAGAAATTTTGAGAGGAAATTTTGAAGGACAGGAAGGACAATTTAAGA GCAAGGTTGGGTTTGTAGAGACTTCTCTCTCTAAACTAGTGGCTGCATAACTTGAAAATAAAGTGTGGTGATGTTGTAGA ACAGAATGTATATCTTAAGGGAGTTGAGGAAGAGAAGGGTGACACATGTGTATTGTTTTGCCTCTTCGGCCACATGACAA GTGCAAAACATAGTCACCTCTTGGTGGTGATCTTAACTCTGCCCTCTAATCCATCATTAGAAGCTGATTAACCTCAATTA ATCAAGAAATACTCATTCTCTTCTCTTAATTTTTTTTATGATAATAATTTTCTATCGCATAAAATAATAGTCATTACTAA TGATTTGTTAATTTCATATCGCATAAAATAATAACTTTCGATGAAGACTTACCTCTCATCTTCTTGATTAATTTAATTTT ATAATTACTTTTAAAAGTAAGGTTTACATTCAAACGTTCATTTATTTATGAACATTTTATTCAAACAATCACATACACAC TAACACCAAATAAAAATAAAAATAAAAATAATAATAATAATATTAGAAAACAATCATCGATGTTTATTCCATGAGTACAA TCATATTTGAACAAGTCTAAATTAAAGGATCTATTCTAGACCATTCATTAAAAAACAAATTTATGTAACGGTGGTGCATT TTTGAACCACTACCTATTCGGTAGTTCGCCTTAGACGCAACCGACTGGTGGTGGTTTGCCCGTGCACCATCCATCTGGTG CTCCATATTAGAACCGACCCGAAGGGTTTGATTTTTTTTTTTTCACAGCATAATATATAAAAACAATCTCCGTTCAGTCG CACACACCAGCACCCTGACACACACTGTTGAACCCACTTTCTTCTTCCTTCCTTCGTCCGTTCGCCGGCCACCGCCGTCA CGCCGTTCGTCTTCAAATAATCCTGGCTCCGCCTCTGTCTCCGGGTGCTGTTGATTTCATTCAGCGATGGGCGATACTAC CAGAGTGGAGGAGTTGCCGTTACCGGCGCTGTTTGAGCAAGCCCGGGAGATCCACGCCACCGCCACGGAATCCGGTGCCG ATCAGGTACTTCTTCCTTCCGCTCCATGTTGTTGTTTTTTTGGATTTTCTGTTCTTTGACCATGCTTTTGAGTCTCTTTG TTCGATTTGTTCAGGAGCTTGTGAAGAAGGGTTACGAGACGTTACAGAAATGTGAGGACATGGTTAATAAGCTCGGTTTG TTCTCTGCTAATGAAACCAAAGAGGATATCAGCACCGGCAACCTTAAGTACATTCTGGTACTTGTTCTTTCTTGTCAAAT TGTTTTTATTTTTTATTTTTATTTTTGCTGAATTTTTTATTGATCGTTGTTTGCGTTATTGGTGTGACAATTCTTAGATA TATGTCTTCATTTTTAGATTAGTGTATGTTTGGAAACCTAAGTAAGTTTGCACATTTGGGGAAGAAGTGATTCTGGGAGG ATTGGAAGTTGTCTCAAACATTCTGTGCAATGAATTTATGTGCTGAAGAGAAATGAATAGTATGTGGGTTATAGTGGATT TGTTAGGGCCATGAGCCATCTGTTTGATAGTGTTTCGGCTGATCGAATCGGCTTGATGGGATGGGAGGGGTCCAAATCCC TCTCCCCCATGGAATTGGAGAAGTTTATGTACTTTAACAGTAATATACCAGCACATCAAAACATAACTTGTAAGACAATA ATTTAATTTGTGAAGTTAGATTAACTTTATAATGCTTTATAGTAAAAGCTTGGCCATTAAGCATACATTTTACATGAGAA TTTCTTCTAAGGAGCTATAGTAATTAATTCGTGCAGTTAGATTAACTTTATATTATCCAAACCATGTAGAGAATAGTCTC TATTCCGTTCAACTCTATGATGTTCCACCTTACAAACTGATCCTAATATAGGTTAAATATTTTTGTGCGTTTAACCACAA CAGGTTCACCGTTCATGCTGCGAGTCTGTTATCAACAAAACCAAATTTAAGGACAATTAATTTTAGAAGATTATTTCAGT CCCGTACTTGAAACTTCTTCTACCTCTAGTTATATCAAAACTGAACATGGAAGGCGCTATGACCCAGTAAACTGCGAATC ATGTTCTAATTCTATTTAAATTTGCTGTTCGGAGTTCGGACTGTTTATAATTGTATTGCATTCTACTAGAAAAGATAGAT ACAGGTTGTTTGGTGTCCTGCTTCAGTTTAGTAACTTATGATGCTATTTGTCCCTGGAAGGAATATATTGGCTGATATGG GTATATGGCTCTATTTTGAGCTTCCTTTGAAGGTGAAGTGAAATATATATTGGTTAGCCAAAGTACCCACTTGTCATGCT CACCCACAATTCAGTTTCCTAGTAGATTTAGTGGTGGATATTCTAATGGAATAAGTTCATCAGAAATGGTGTTTACATTA CTTGAAGGGAAAGTGAAAAGTTTGTACTGTGAAGTTAGTATTTATAAATAAATTATAGCATCAATATCCATTTACCCCTA CTTATTTCATCTAAGTATGAGGATGTCATGGATGCCTATAAATGTAGAAAGCTGGACATATGCTCCTCCTGTGCAATGCT TTCATTCGTTTTGACTTTTAACTACTGATGATTGAGGATAACTGAACATTTCTTTTTTTGGTGGGTTGGATAACTGAGCA ATTAATATTGATATCCTTTTACTATTTTATTAATTTTACATAAAAATTCCCTCAGGTGCCGTTTTATCTTGCTGAGTTGA CTGAACAAATAGCACAGGATGACAGGATACAGATTGTAAAGGCTTCGCAGGCAAAACTAAAGGTGAGAGCTAATGTGTGG AAAGGAACCCCCTCCCCTAACAGTCGATGCAAATAAAATGCACTTTTCCTCTTAAATTTGTGAACATTCTTTATAATTAA TCCCCTTTGATTGAAGCTTACCAAAACAGTACCTTTTGTAGGAATTTATCTCATTTTGTGAAGCTATGGAGCTTGTCCCA AAAGAGGAGTTGGAATCTTATACGCAAGGGGCACCAAAATCTGTTGCTGATCAGAGGGCCCGAAAGGTGTTTTTTTCCGT ATATATTTATTGAAAGTATATGCCTTGATTTTTTTAATAGAATCTAGCAAATTTTAACTCTTTTTTCCCTTCATTACATT GAAATGAAAATTGGAAAAGAAACTTTTAAGGATGAGTATCATAATTGATTGGTACCAGCTATGACCAAAGAGAAGTACTG AATTTTATTGAAAGAATGACATGAAAACTACACAAATCGCTGGTATTTGAGAGACCAGGACTCTCCCTAATTTTCCTTAC AGCAAACAAGATACCCCCAAAAGCAGTATCATCTCTTATTTATATTACTCCAACTAACTATCCCCACTTGTAACTACTAA CTAACCCCCACAGACAGTTTATCTGTGAATAATGCTCACAAATTAGTGAATATTTTGTATGTTGTTGTGCAGATTGCTAG ATTTAAACGTAAAAAAGCTGCTGAATCTAAGCTGTTGGAAATAAAAGAGCGAAAGGAACGGCGTGGGCGTTCTACTAAAG CAGCTGCCTTGTCCACCCCTGTTGAGGCAGGAGAGGAAGAAGAATTGGATGATGATGGAGAAGAAGAAAGAGAGGTTTGT GTCTTAATATGTTGTACTTATTTTAGCGTAATGTGGCTATATTCTGTTACTGATGCTTTATTTTGTGAGCTTATTCTATA TGACTGTATCCCTGAAAATTTGTTATTTCCTGATTGATTAACCTTCCATTAGATAAGCTTAAATTCAGCTTAAATCTCTA CATATTACTCTGACTGTATCACATCCTCAAAAGCATTTATTTATGCAGCTTTTGTTTCAATGTTGTGCGTATGTGAGTTG CATAATTCTGATTTCTGTAAACAGGAACAGCATCTGATCATTGTTCCATTTATTTATTTTCTTTTCCTTTTCTTTCAGGC TTGGAATACTACCATATCTTTGGCGATATGTAAGGTTGGTTCAGATTTATGCAACAATTTCTCTTTCCATTATTGAAACT TCTATCTTTTTTCTCTATATTGTTAAAGCTTCTATTTCCATTCTACTTATCTATATCGCAATGTTCAGGCATTGGATCTG CTGGAAATGTTAAAGAAAGAGGAAGAGATGCTTCTTGCGGTAAAGGATAGACAATCCAAGGTAGGAAACTGCTTGGTGTG TGATACTTCATGAAACACTATATTACCTTGGCTGTTGGCTGTGGACCTGTTGCCACTATCTCATAGTGATGTTAAACATT TACACTGAAAATCTTCAGTACTTTATCTAATGTTGATGAGTTGAAAGTTATAATGTAGCAGAAATTAATACTTTGGTAGG ACATGGTAGCACACTTTACAAGCTAATTCTGGATTATTACGCTTTCTAGCACATATAATAGAACATATTGGACATTTTCT GTTTAGAAGAGGAATGGGAAACTGTACATTTTTGTAGGCTCAAATTTGATTTTATTCATTGCTTCTTGTGGTTTTGCCAT GTTTTAGGAGGGGGATAAGGAGTTCTCGAAGGAAGTTCTTGACGAACGTGCCATGAAAGCAGAGGCATGGCATCGTGATT CTGCGGTTCGTGCACAGTACACTAAGCCATCACAACCAATCACTTGTGCCACTTTTGCTCAAGATGTCCTAGAAGGAAGA GCAAAAGCTTCACAGGCCCATGATCACAAACACCAACCACTAATATTTGGACCAGCCAGCCTTATCAATGGACGTTTCGT AACGGAGAGAGAAAGAGTGGCTGCTCAGGTCTTCCAACCCAGTCATAGGTACATTATTATCCCATCTATCAATCAAATGC ACATTTAGTGTAGTTAATAATAATTTGGAATGGGGAAACATAAAAGATTCCTTGAATAGAGTATGCCTGAGAGGAAATAA AGTTTTTTTCCTTGTAGTTTTGTTCTATTGCCCATGAATGATAGAGGATGAGTAAGAACAGGACACCATTCGCTGCCAAT GATTGATGCTAATAGTTGCCTAAGAGTTTTGTTTATAGAAAATCCTTGGGAACATTGTTTAGGCCAAGGAAGAACTTTAT ACTCTGATTACATTTTTTGATATGCTAAGTAAAATATTTTATGAAGGATGCCAACTATGAGCATTGAGGAAGCCGGGCTT AAAGAAATGGAAATAATGAATAAATGGCAAGAGAACAATGTCAGACTCATGGAAGAAGCCAATTCATCTTGGTACAAGGA GAAGAAGTCAAAGCCAGGGGAAGACGATGATGAGGATGAGGATGATGATGATGCACAGGAGAGAGCAAGAGCTTTGGATG ATTGGAAGGATGAGAATCCGCGGGGTGCAGGAAACTCGAAACTTACTCCTTGTGGGTAATTGAGTCTATTCTTCTGTGGC TTAAGAATATAGGGTTGGGATAAATCTCTTATTGTAGCAAAATCTCTTTATTTTTGGTTGATTTGCTTCTTGTCTGTATT AGATTATTATATGTCTACAAGGATCTTCATCCCATCATGTGTATATTTTTGGAGTGCACCCAGGTGCTACTGCTACCTCA CTTCGCCCCTTTTCATTTCTGTTTCCCATCTCTATCACAGAATTTTGTGTAAGAAGTTTGTTTTGCTACTAGTAGCAAAC CTGTGTGTCTATTTTTCATTGATATAACACCAGTTTTATTTACTGTATTCCATTATCATTTCTTATTTGACACCAGCATG ATATATCATCATGGTATCAATTTGCT
CDS sequence (LotjaGi4g1v0073200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCGATACTACCAGAGTGGAGGAGTTGCCGTTACCGGCGCTGTTTGAGCAAGCCCGGGAGATCCACGCCACCGCCAC GGAATCCGGTGCCGATCAGGAGCTTGTGAAGAAGGGTTACGAGACGTTACAGAAATGTGAGGACATGGTTAATAAGCTCG GTTTGTTCTCTGCTAATGAAACCAAAGAGGATATCAGCACCGGCAACCTTAAGTACATTCTGGTGCCGTTTTATCTTGCT GAGTTGACTGAACAAATAGCACAGGATGACAGGATACAGATTGTAAAGGCTTCGCAGGCAAAACTAAAGGAATTTATCTC ATTTTGTGAAGCTATGGAGCTTGTCCCAAAAGAGGAGTTGGAATCTTATACGCAAGGGGCACCAAAATCTGTTGCTGATC AGAGGGCCCGAAAGATTGCTAGATTTAAACGTAAAAAAGCTGCTGAATCTAAGCTGTTGGAAATAAAAGAGCGAAAGGAA CGGCGTGGGCGTTCTACTAAAGCAGCTGCCTTGTCCACCCCTGTTGAGGCAGGAGAGGAAGAAGAATTGGATGATGATGG AGAAGAAGAAAGAGAGGCTTGGAATACTACCATATCTTTGGCGATATGTAAGGCATTGGATCTGCTGGAAATGTTAAAGA AAGAGGAAGAGATGCTTCTTGCGGTAAAGGATAGACAATCCAAGGAGGGGGATAAGGAGTTCTCGAAGGAAGTTCTTGAC GAACGTGCCATGAAAGCAGAGGCATGGCATCGTGATTCTGCGGTTCGTGCACAGTACACTAAGCCATCACAACCAATCAC TTGTGCCACTTTTGCTCAAGATGTCCTAGAAGGAAGAGCAAAAGCTTCACAGGCCCATGATCACAAACACCAACCACTAA TATTTGGACCAGCCAGCCTTATCAATGGACGTTTCGTAACGGAGAGAGAAAGAGTGGCTGCTCAGGTCTTCCAACCCAGT CATAGGATGCCAACTATGAGCATTGAGGAAGCCGGGCTTAAAGAAATGGAAATAATGAATAAATGGCAAGAGAACAATGT CAGACTCATGGAAGAAGCCAATTCATCTTGGTACAAGGAGAAGAAGTCAAAGCCAGGGGAAGACGATGATGAGGATGAGG ATGATGATGATGCACAGGAGAGAGCAAGAGCTTTGGATGATTGGAAGGATGAGAATCCGCGGGGTGCAGGAAACTCGAAA CTTACTCCTTGTGGGTAA
Protein sequence (LotjaGi4g1v0073200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGDTTRVEELPLPALFEQAREIHATATESGADQELVKKGYETLQKCEDMVNKLGLFSANETKEDISTGNLKYILVPFYLA ELTEQIAQDDRIQIVKASQAKLKEFISFCEAMELVPKEELESYTQGAPKSVADQRARKIARFKRKKAAESKLLEIKERKE RRGRSTKAAALSTPVEAGEEEELDDDGEEEREAWNTTISLAICKALDLLEMLKKEEEMLLAVKDRQSKEGDKEFSKEVLD ERAMKAEAWHRDSAVRAQYTKPSQPITCATFAQDVLEGRAKASQAHDHKHQPLIFGPASLINGRFVTERERVAAQVFQPS HRMPTMSIEEAGLKEMEIMNKWQENNVRLMEEANSSWYKEKKSKPGEDDDEDEDDDDAQERARALDDWKDENPRGAGNSK LTPCG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 402 | 394 | 1.6E-113 | – | |
| PANTHER | 9 | 402 | 394 | 1.6E-113 | ||
| Pfam | 12 | 393 | 382 | 2.3E-82 | ||
| Gene3D | 12 | 223 | 212 | 8.1E-52 | ||
| MobiDBLite | 160 | 191 | 32 | - | – | |
| MobiDBLite | 177 | 191 | 15 | - | – | |
| MobiDBLite | 353 | 405 | 53 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Regulation of signal transduction | Any process that modulates the frequency, rate or extent of signal transduction. |
Expression pattern of LotjaGi4g1v0073200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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