Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0087800 |
Transcript ID | LotjaGi4g1v0087800.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | 14-3-3 protein, putative; TAIR: AT1G26480.1 general regulatory factor 12; Swiss-Prot: sp|Q9C5W6|14312_ARATH 14-3-3-like protein GF14 iota; TrEMBL-Plants: tr|I3S2S9|I3S2S9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0087800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:11650307..11655579) extracted from Lotus japonicus Gifu genome v1.2.
ATTGACCCTACCTAACCTAAGATTAACTAAGCATTGCAATTCTTCCGATTTGGGCGCTTCCCCTTTCAAAATCTCTCATC CAACGGTCCAGATTCGGTCTTACCATCTCCCCCCCAATTGTTGCTCCACCTTTATAACAATTCCACCCTACCTTCCCTTC TTCCTCGCTCGTTCGCATTCTTCTTCTTCTTCTCCACATCGCAAAAATTTCCAACGAGTTTGCTGATTTTTCCTCTGATT CAACAATGGCCGCGGAGAAGGAGAGAGAGACGCAGGTTTACATGGCCAAGCTTTCTGAGCAGGCTGAAAGATATGAAGGT TCCTTTTTCCCTTTATTATTGCAATGCACACCTTGATCCATGGTTAGATTTAGGGTTTTGAATCGCTGTCGCGGTTGTGG TTGCGTTACGAAATTACAGTCAAATGCAGGTTGAAGCGACCGCAAAATCGGTTGCGATGCAGCCAAAATTGCGGTTACCG ACCGCAATTTAGAACCCTGGTTAGATTGATAATGATATGTTGCGTTACGGAATTACAGTCAAATGCAGGTTGAAGGGACC GCAAAATTGGCTGTGATGCAGCCAAAATTGCGGTTGCGGACTGCAATTTAGAACCCTGGTTAGATTGATAATGATATTGA TATGTTGCGTTTGGGTGCAATCCCAAGGTGTGGATATATTACAAACTGCAAAAAATGAATAATGTAACAAAGGAATGATA CCAACAGAAAAGTCAGCACAAAAAAACAATGTGTTAATTTTTTTTAAAATAGATTTATGATATAGAGCATATTGGAAAAA ATGTCAGAAATGTGTGTTGGTACGTGGTGGCATTTAATTTCTCTTAGGTTAGCTTGTGTTTGTTTTGATGTTCCCTGAAT TAACCTTCATATATATTATGCAGAAATGGTTGAGTGCATGAAGGCTGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAG AGAGGAACCTCCTCTCAGTGGGATATAAAAATGTGATTGGTGCAAGGAGAGCCTCGTGGCGCATTATGTCTTCGATTGAA CAGAAGGAAGAGTCAAAGGGAAATGAGAGCAATGTGAAACTGATCAAGGGTTACTGCCACAAAGTAGAGGAGGAACTGTC TAAGATTTGCATTGACATTCTGACAATTATCGACCAGCATCTGATTCCTTCTTCCGCTTCAGGAGAAGCCACCGTTTTCT ACTATAAGATGTGAGTCATGTTGTAATTAGTACTCTTATGGCATTTTCTTTGTTAATTCAATTTATCTGCTTTATTGAAT AGTTGCTTCCTTTGGATAGATATTTTCCCCATTTTGAATATAATATGAAAGATGCATGCTATGAGAGATAAAAGATAATG CAAAAATATATTGTGGGTTTGTTCTATTTTAATTTATTGATTATTAAGAAACAAAAGGTAGCAGAACATTCTACTTATTC GTAATAGCATGATATATATATATATATATATATATATATATATATATATATTGGTTGTTTGAAAATCTTCCGTGCAGAAA TAATGAGAACAAAAGGAAAATTTAAGACTGCAGAAGGCTATAACTACTGAGCAATAGAGCATCTTATTAATAAGACAAAG GGTTGAATTGCACACAAAAAAAAATGCAACTTGATATTAGACAAGTGCTTAAGAAATCAAATTAATTCTACAATCAGAAG CTACTCACCTTCTTCCCAGAATTGATTTTTAACTTCAGAGTCAATTGATGAAGGATTTCCAAACATGTTACTCTGACTTT TATTTTCCTAAAATACAACAAAAAGAAACTGACTACAATTTTAGTAGCTTTCCCATCAGCAATATCTCTTGCTAGTTTTC ACATGCTTTGATTCTCTGTTTGATTTCCTTCAGCTTCATTTTGATCCAGGAAAGGTGATTATTATCGTTATCTTGCTGAG TTCAAGACCGACCAAGAGAGGAAGGAGGCAGCTGAGCAGTCACTAAAGGCATATGAGGTTAGTGCCTGGCCTCTCTCATT TCAACACTGAATTGATTCACATGGGAATATATGATATCTTGTGTTCATCTTTAGTATATGGTGCTCTTGCTTGATGTACA AAACAATTTCTGTTAACAGGCTGCTTCAGCCACTGCAAACACAGATCTTCCTTCAACACATCCAATCCGTCTTGGACTTG CACTCAACTTCTCAGTCTTCTATTATGAGATAATGAACTCACCTGAAAGGTAACTCTCTATTCTGGCACTTTGGCCAAAC TCAAATGTACAGGATTTGGAGGAGTACTTGGCTTAGCGTGACTGTTACTTTTTCAACAAAAAGTGCATCAGATGGATTAA TATCCCACTTTCATACTTTCTAATGATTAACCAAACAGACTCTAAGGCTTACCATGACTTAGGAGTTTATTTTAACGTCT CCGTTTTCCACTCATAACACCAAAATTTGCTTTATGAAATTATTTTATAGTAATAATTGTATTTGAAAAATTAAATGCCG GTACGAAGGGTGGTGAGAGTAGAAAAAGGTATGTTAAAAGAAATGTCCTAAGTCATGCCAAGCCTTAGTCCATGGAACTG CTTTTTGCACATCGTTTTTAGTTTTGCTATTTTTGCCTACTCCAATCTTATTTTTATTTTTTAACTTAAGGAGATTGGGA CATGCAAATAGTAAAAAAGGGTGTGTCTTGGTCAATCCAATTTTATAACCCATCATTCTTTTAAAATGTAGGATTTTCTC ACTTACACATCACACTCACATGTGCTTAAAAGAATTCTTTTTGTTTGCATTGGTCCAATCAAATTGCTTTTGTTGTTAGC TCTGGTTTTAATGTTAATACTGAAACATGCAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCGATTGCTGAGTT AGACACCTTGAGTGAAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTTACTCTCTGGACCT CTGATTTACCTGAGGATGGAGGTACGCTCATGATTGACACTTGATATAAGGTTCATTGTGGTTGTGCCCTGCTAAATACC TATAACATTTTTCTGGATAAATATTAATGTTCAAGACCAATAGAAGAAGACAAGTATACTTCTCTTCTACCTACACAGTA TTTTTCATTCTTTCCTATCCTTGAAAGAAAATCAAATTAGGACAAATAGCAGTATAAAAAAAACTGTGTTAGCCCAAGAT TTTAATTTCTTGTGGAGCTACTAGTTCTTGCAAAATTTGGGTTCTTGTTATTTTTCTTGCTATATGAATTGCAATTAGAA CTGCTCAATAGTGGTGCTCAGAATATAACTGGTCTCATGCAGGTGATGAAATCAAAACAGAAGAAACAAAACCTGCTGAA CAGGAGGTATGTGTATGGTAATTTTGCCTGAATTTGCATGATTTTCATTTTTTTTAGAAAGAAAAATTATATTGATGAGG AAAATGTCATTGATATACACCCTTCCTCAAACTGGATCAAAAGCCAGCAGCATCGAAGGCAAAAACCCCAAAAAGAACAG TAACCAACCCATAAAAGCACCTGAGAAGAACCTGTAAGGCTTTAACCCCCAAAGTCAAAGACAAAAACCAAAAACACGAG CCAGCAGCCCTCAAAGCCCCTAAAACCAAATCAACACCCAAAACCCCAAATTTGCATGATTTTCATGAGTGTTTGTTTTT TGTATGCATATAAAATTTGCAAACAAATAAGGACCGACTCTGGCACGGACACCCGACATGACATAAAATGGACACCACAT TCAAAATAAATTAAGTTTTATAATTTTCTTATCATGATATGTCTCATAAAAAACACTAAGTCATATTTTCACAATGAACA CTTTATCTCTTTGCAAAGAAAATCCTAAAGAGAGAATTATTTATATTCCTTAGAAGTTAAAACAACTTAATAGATTTAAA ATGGAATTTTAGAATCTAAAACATATAATTAAGTTGGCTTTTATGACAATTTTAAAAATTAATATTGCGTTTTATGATAT CAGTGTTCTAAAGATGTTGGTTCGGTCTCGTAAGCTTTGCTAAACAGTGTCTTGAGTCAGAAAACATTTTTTTTAGTTCG GACACTGTAACGGGATGTCTAACGAACTGAAATCCTCTGTTTTCCTTTAGTGTTTCATTTGAGATTATACCTGCCATACC CATGTCTTTATTAATTAACTTGTCACAATTTTATCATTGGGACAGAGAATAGGACACGAAATGGGAATAGAGGATCTTAA TCCATTTCTAACATGTGTTGAACCGGTGTGTCACCAATGCCGAACACCCTTACACTTCCCTGTTTAGATGTGGCTGTAAT TCTTAGGTTATAAGAATCTAAAAGTAAGCTAATGATGTAAAACTGAGGTGTGGAATTTTTTTTTGTTTTCCTCTTCTCAA TGCTAAAAGGGGCTGACATTTAGTTGAGAGAGGTTTATGCTGGATGTTCACTTGGTCAATGTTTCAATCAATCCTAGTAA TTTCCTTTTGGTGACAAGAACTTATTTCTCTTCATCTTCCACATGCTTATAGTGACAGAAAATTAAGCACAAACAACATT TCCCTTGACATTTTTTCTTTTCACTTACAGCACTAACATGGCAAATTTCACCCTGGACGCAGTAATCAGACTTCAACGAC GTAATTTTTCAGCATTTAATCTAGCAGTTCGTTTTGGACTGAACTCCATTATTACTGTGCTCTTGTTACAACCAACTGAT GCTAGAAAGTGCAATCTACAGCTCTTTTCTTCTTTTTTTTCTTTTAATTAGCAAAGCTTTACTTTCTACAGCTTTGATAT ATTTCAAGTGAAATGGTCAATTTCAGTAATGGATGATTTACATGTATAACCAAAAGCACATCTTTTCCTTGTTGGTTACT TTTTAATTGATTCTGTCCAAAATGTTTGTTTCCTCTGCACTTTTAGGCGCCAAAAAATTGTTTAGCAGGGTTGTTTAACG CAAATTTAGTGATGAGTGTAGTCCATTATAGTGATTACAGCTCTAGTTTATGATTCGTTTGTATGTTAATTGTTAAGATA TCCGATGATCTTGTTCTATTGGATGGTTATGAAGTCTAAACAATAAGCATAGATCAGAAATAGAAAACATCAAACTTTTA AGGAGATGCACTTCGGCTAAGATAGAAAAATTAGAGGTGCATTCCCTTTTAACATCTTTTTGGAGTGTTACTGCTACTTC TACATTTTTACCAGCTCTTACTATTGTGCTGGAAAATAATGGACACAAATAGTAAAAACAGTAGTGTCTATAT
CDS sequence (LotjaGi4g1v0087800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCGCGGAGAAGGAGAGAGAGACGCAGGTTTACATGGCCAAGCTTTCTGAGCAGGCTGAAAGATATGAAGAAATGGT TGAGTGCATGAAGGCTGTAGCAAAACTTGATCTTGAGCTAACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAAAA ATGTGATTGGTGCAAGGAGAGCCTCGTGGCGCATTATGTCTTCGATTGAACAGAAGGAAGAGTCAAAGGGAAATGAGAGC AATGTGAAACTGATCAAGGGTTACTGCCACAAAGTAGAGGAGGAACTGTCTAAGATTTGCATTGACATTCTGACAATTAT CGACCAGCATCTGATTCCTTCTTCCGCTTCAGGAGAAGCCACCGTTTTCTACTATAAGATGAAAGGTGATTATTATCGTT ATCTTGCTGAGTTCAAGACCGACCAAGAGAGGAAGGAGGCAGCTGAGCAGTCACTAAAGGCATATGAGGCTGCTTCAGCC ACTGCAAACACAGATCTTCCTTCAACACATCCAATCCGTCTTGGACTTGCACTCAACTTCTCAGTCTTCTATTATGAGAT AATGAACTCACCTGAAAGGGCCTGTCATTTGGCTAAACAAGCTTTCGATGAGGCGATTGCTGAGTTAGACACCTTGAGTG AAGAGTCATACAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTTACTCTCTGGACCTCTGATTTACCTGAG GATGGAGGTGATGAAATCAAAACAGAAGAAACAAAACCTGCTGAACAGGAGCACTAA
Protein sequence (LotjaGi4g1v0087800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAEKERETQVYMAKLSEQAERYEEMVECMKAVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNES NVKLIKGYCHKVEEELSKICIDILTIIDQHLIPSSASGEATVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKAYEAASA TANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPE DGGDEIKTEETKPAEQEH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 246 | 246 | 7.7E-124 | ||
PIRSF | 1 | 247 | 247 | 2.2E-120 | ||
PANTHER | 3 | 249 | 247 | 1.0E-160 | – | |
PANTHER | 3 | 249 | 247 | 1.0E-160 | ||
SUPERFAMILY | 6 | 237 | 232 | 2.49E-104 | ||
SMART | 7 | 248 | 242 | 1.2E-174 | ||
Pfam | 13 | 235 | 223 | 2.5E-105 | ||
Coils | 13 | 33 | 21 | - | – | |
PRINTS | 39 | 68 | 30 | 2.3E-81 | ||
ProSitePatterns | 45 | 55 | 11 | - | ||
PRINTS | 88 | 112 | 25 | 2.3E-81 | ||
PRINTS | 119 | 141 | 23 | 2.3E-81 | ||
Coils | 138 | 165 | 28 | - | – | |
PRINTS | 154 | 180 | 27 | 2.3E-81 | ||
PRINTS | 181 | 207 | 27 | 2.3E-81 | ||
Coils | 195 | 215 | 21 | - | – | |
PRINTS | 208 | 237 | 30 | 2.3E-81 | ||
ProSitePatterns | 217 | 236 | 20 | - | ||
MobiDBLite | 238 | 258 | 21 | - | – | |
MobiDBLite | 240 | 258 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0087800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…