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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0117800 |
| Transcript ID | LotjaGi4g1v0117800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha/beta fold hydrolase; TAIR: AT2G18360.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|O05235|YUGF_BACSU Uncharacterized hydrolase YugF; TrEMBL-Plants: tr|A0A151SEP8|A0A151SEP8_CAJCA Epoxide hydrolase 4; Found in the gene: LotjaGi4g1v0117800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17063093..17064540) extracted from Lotus japonicus Gifu genome v1.2.
TTCCTTGAGAAATTGCAGGTAATGTTCACGAATAGGAAGGAGCGAGGTGAGTTATTGGAGGGCTTGGTAATAAGCAACAA AGACGTCAACATCCCAAATTTTCCGCAGGTAAACAATTTACCCCTCTCTGGATTTTGAACTCATGTTATCCATTCTAATT GACCTTCATGCTTTCATTATATAATATAGTTACTCATTAATGTCCCTTTAATTTGCAGAGGATACATCTTCTCTGGGGTG AGACTGATCAAATTTTCAAGGTGGAGCTTGCCCAAAATATGAAAGAGTATGTCTAGACTATCTAAAATAAATTAAGTGTA CATATCAAACTAACATATACTCCCTCCCTCCATTCCTATTTATCTGTCCACTTTGAGAAAAATAATTTATTCATATTTAA CTGTCCATTTAGCGTTTCAAGAGAGTATTAAATGATGTTTTGACAACTAATACCTTTATCAGAACAATAAATGAAGAAAG ATAAAATGCAATCTAAAGGGTAAAAATGAAAAACAAATAGTACTACTTTTATGAAAACCAACAAAATTAATTGCACTCCT TAATATGTGTGTTTCTTCTCTTCCCGGACAGTTAAGAGCATCTCCAATGCTAGTTCTTAATTCTTAGTTCTTAGCATTAT TCATGTGGGTCCGTACTGCCACATGTGCTTAAGCAACTCTTTGCAGATTTCGCTCCAACCATGAATTCTTAGTTCTTAGT TCTTATCATTATTTATCCGGTCCTACAATACCATTATTTTCATTTTTTTATTTCCATATAATTTTGATTTAAATTTAAAT GCTAATTTAATACTTAAATTAAATGAATGAGAGAGAAAAAATTAACTTTTTATGCTAAGAACTCAAAAGTAAAACATCTT ATATAAGAACCTAGTTCTTATTTTTAAGAACTTTGAACTCCACGTCATCCCCTCCAATGGTTAAAAACTCAGTTCTTAGT TCTTAACTCAAAAATAAGAACTAAGAACCTTGTATTGAAGATGCTCTTAAATAGGAACGGAGGGAGTATAATTGATTCAT TGTTGGGATTGGTTAATTTTTGCATTCTACAAAAAGTTGGTGAACTAACCGTTCATTAATATACACTTACACCTAGGGGT GTCATTAAATTGAATTGACATGATGAACAAGATAATTCAAATCAATATGATGGGTTAGTAATGATTTAGATGGTTGGTTC ACTTTTTTCCCAATCTAAATTAAACCAATTGGGGTTAGTCGATTAACAATTTTTTTAATCAGCTTGATCTATTGTAACAT ATGCATGATCTAATTAATGACTGCAGGGAACTAGGAGATGCTGCATCATTTCAAGGCATAAAGAAAGCTGGTCACCTAGT TCACTTGGAGAGACCATGTGTCTACAATAGATATCTCAAGCAGTTTATTGCTTCCTTCTTGGCGTCAATTAATGAAGACA AAATATAA
CDS sequence (LotjaGi4g1v0117800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCACGAATAGGAAGGAGCGAGGTGAGTTATTGGAGGGCTTGGTAATAAGCAACAAAGACGTCAACATCCCAAATTT TCCGCAGAGGATACATCTTCTCTGGGGTGAGACTGATCAAATTTTCAAGGTGGAGCTTGCCCAAAATATGAAAGAGGAAC TAGGAGATGCTGCATCATTTCAAGGCATAAAGAAAGCTGGTCACCTAGTTCACTTGGAGAGACCATGTGTCTACAATAGA TATCTCAAGCAGTTTATTGCTTCCTTCTTGGCGTCAATTAATGAAGACAAAATATAA
Protein sequence (LotjaGi4g1v0117800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFTNRKERGELLEGLVISNKDVNIPNFPQRIHLLWGETDQIFKVELAQNMKEELGDAASFQGIKKAGHLVHLERPCVYNR YLKQFIASFLASINEDKI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 92 | 92 | 2.0E-39 | – | |
| PANTHER | 1 | 92 | 92 | 2.0E-39 | – | |
| Gene3D | 1 | 91 | 91 | 6.6E-12 | ||
| SUPERFAMILY | 24 | 87 | 64 | 8.84E-11 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0117800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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