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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0117800 |
| Transcript ID | LotjaGi4g1v0117800.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pimeloyl-[acyl]-carrier protein] methyl ester esterase; TAIR: AT2G18360.1 alpha/beta-Hydrolases superfamily protein; Swiss-Prot: sp|Q8IUS5|EPHX4_HUMAN Epoxide hydrolase 4; TrEMBL-Plants: tr|I1JCP7|I1JCP7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0117800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:17060044..17063397) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGAACCTTGTTGCAGCACAGAGGCCATTGATGCATGGGCTAATGAAGATGGCAGGAATCAGGCCATACACGGTGGA GATAGACTCAGGGACAGTGATGAGTTTTTGGGTGCCTTCAGAAACCATCTCAAAGCCCAAGAAAAAAGATGAAAAGCCTG AAATCGTAGCAAAGCCCACAAAGCCCACCGTGGTCCTGGTCCACGGTTTCGCAGCCGAGGGCATAGTGACATGGCAGTTT CAAGTGGGCGCGTTAACCAAGAAGTACGCGGTTTATGTTCCGGACCTTCTCTTCTTTGGTGGTTCCACCACTGACAAGGA GGACAGGTCACCGGGGTTTCAAGCGGAGTGTTTGGCAGTGGCACTGAGGAAGCTTGGGGTGGAGAAGTGTGTTGTGGTTG GGTTTAGCTATGGTGGGATGGTGGCGTTTAAGATGGCAGAGATGTACCCTGAGCTGGTTCAGGCCATGGTTATTTCTGGG TCCATTTTGGCTATGACTGATTCTATTAGTGAGAGCTCGCTACAAGAGCTTGGGTTCTCTTCTTCGAAGGAGTTATTGTT GCCTGATTCTGTGAAAGGTCTTAAGGCTCTTTTATCTGTTGCTGCTCATAAGAAACTTTGGTTCCCGAATCGGTTGCATA AAGACTTTCTTGAGGTATGTATGTATGCCCTTTGTTTTGTTGTCTTCATTTTGCACCGATTTTTTTTTTATAGACAACAA GAATTATATTAAATGGAAGTATAAGGGGTACTTCAACTCAATACAAAAATGAAGAAGAAGAGACAAAAAAAGAGCAAACT AAACTAAGAACTAGCAAGTTCAAAAAAACAAAGGTCCAAAAAAGACGCAACTCATTTTGCACCCATTTTTTTTTTTAGAA TCAAACAAAAATATATATATTAATAGAAATTAAAGGGGAGGGTAAAACCACCCAGTACAACACGCGGTCTATTATGATAT ATGAAGTGTGAACACGTTTCATATTAAAAGAAAATAAGAGTGTGTACTAGTTTAAAATGTAAGAATCAATATACGTTATA TTTTAGGGTTTTTTTTGGAAGAAAAATGTACTAATATTCAATACATTTTAATATGCTCTTTACATTTATGTGGATAGCCA TGTAGTAATAATGTAATATCTATCTTACGTACACTAATTAATATATCATCCTTGCTGCGGTACCTTAAGCTAGATTAAGA CGTGATACCTAAAATGATCTAGTTCAATAATAAAGACTTTGTGTATTGATTAAAATTTTGATTTTGTTCTATCATATATA GTAATACAATGTTCCATTCTTAGGAACGTGAGATATACGAGTTGTGTTTTCTGAGCTTTATTCATTCATCAACCATGATA ATTTTACGCGCATCTCCATTATCATCATTCGTTTCCACCACTCGTCCATTTTCATTAAAAAATGAATGTCATGAGATAAA GTTAATTGACAAGTGAAGTAAAATATAAAAATGTAGTATTTACCTTGAATAACATGATAATAATATATTAAATTACTTAG TGCGGATACCACACCCAAAAAAGATTCAGGGTACCATAGAATTTACCTTAATGTATATAGGCAGTTGTTGCTCACCACAT GGAGCATTTATTAAAGAATATAAAAATAGTAATTACTTGTAAAAAAAATTATTTCATGTTGTCATTATTTTAAGCTCAAG TAAACAAATAAATTAAATATCATATTAATTAATTTAATTACCAATGATGATGGTGAGATTGCTCTTATATGCCTACGAAT GGTTATTTCAAGAGTGTACCCTCCACTCATATAAAATCTTGAATTCAAATCCAATGAATAAAAAATATCTTCACTGAAAG AGCAATAAGTTTTTATTTACACTTTAAATCACACTTCACAAAAAGAAAGAAAAAAGAGATATAATAAATGATGTGATAGG AGTAAAAATGAGATATGGGAAAAATTGTTTATAAAATAGAGAGAAAATGAGGTGTAAATAAATAAAAACCAAATTTAATA AAGAGTCATTCACATTTAAAACACACTCACACTAAAAGAGATAAAAGAAGAGAAGAAAAAAATAAATAATATGATAAATG TTGTGATTAAAAAATGACCACATATTACTTAGAAGAGTTGGTGAAACAATTATGTGTAACAATTTTTTTTTTTAATATTC GAGAATGTTTTGAGGTTACATGACTGAAGAACACGTTGCATATATGCCATTACATTAGTGAGTACTGAGTAGGTAGGTCT TACACTAAAGCACAACTTTCTAGCCGGGATGAGTTAATTGCAATTTTTCATTGATATCCTTTTCATTTTCGATTGTTATA TCTTTTCTCTGACAATGACTGAAAAACATAGTTTATGTTTTTCATGGAATAAGTTTTTCTATTGTTGAGTAATCGAATAT AATAACAAATGGTGCTTGCTGTGGTACCTTAATCCAGATTAAGGCGTGGTACCCTAAAATGATATAGAGCAATAAAAATC ATACAATTCAAACTTAGAGGAAGAGGATGGCGGAAGATTTAAAGGTTTAATATGGGTGGAGCATGAAGGAAGAAGATCCT AACATGAAAGGAATTTAGATGATCTATCTGAATTGCGAGTTGAATTAAAAACTGTAATTTTCATATTGTGTATTATATAA CATAAACAAACTTAAAAAGTCTATGTTATTAATTCATTAAGTCGATTATTAACCTTTTTAAAATTGCAATAGTAAATTTT TTCGCCTTTTTTCAATAAAATTATAACTTAAAATATCACATGGGGTACCACACCCAAAAAAATTTCTGGTTACCACAGAA TTTACCGTAACAAATTATATGTACATCCTCCTTACGTATTAATTTACCACAAAGAAATAGAGAAAGAAGAAAGGGAGGAA TGTGGTAGCTCAACTAAATTGACCTAATAATATAGGATAAGGGTTGAAGATAAGGATTTTAATGGTCAACAACAAATCTA TTGGCTCGATGAAATAATGACTCTAATAATATATAAAACTAAGTTTCGATTCAAAAGTAAGTTTTATAGTAATTTTGCGA ATTATGGGTTTCCTTGAGAAATTGCAGGTAATGTTCACGAATAGGAAGGAGCGAGGTGAGTTATTGGAGGGCTTGGTAAT AAGCAACAAAGACGTCAACATCCCAAATTTTCCGCAGGTAAACAATTTACCCCTCTCTGGATTTTGAACTCATGTTATCC ATTCTAATTGACCTTCATGCTTTCATTATATAATATAGTTACTCATTAATGTCCCTTTAATTTGCAGAGGATACATCTTC TCTGGGGTGAGACTGATCAAATTTTCAAGGTGGAGCTTGCCCAAAATATGAAAGAGTATGTCTAGACTATCTAA
CDS sequence (LotjaGi4g1v0117800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGAACCTTGTTGCAGCACAGAGGCCATTGATGCATGGGCTAATGAAGATGGCAGGAATCAGGCCATACACGGTGGA GATAGACTCAGGGACAGTGATGAGTTTTTGGGTGCCTTCAGAAACCATCTCAAAGCCCAAGAAAAAAGATGAAAAGCCTG AAATCGTAGCAAAGCCCACAAAGCCCACCGTGGTCCTGGTCCACGGTTTCGCAGCCGAGGGCATAGTGACATGGCAGTTT CAAGTGGGCGCGTTAACCAAGAAGTACGCGGTTTATGTTCCGGACCTTCTCTTCTTTGGTGGTTCCACCACTGACAAGGA GGACAGGTCACCGGGGTTTCAAGCGGAGTGTTTGGCAGTGGCACTGAGGAAGCTTGGGGTGGAGAAGTGTGTTGTGGTTG GGTTTAGCTATGGTGGGATGGTGGCGTTTAAGATGGCAGAGATGTACCCTGAGCTGGTTCAGGCCATGGTTATTTCTGGG TCCATTTTGGCTATGACTGATTCTATTAGTGAGAGCTCGCTACAAGAGCTTGGGTTCTCTTCTTCGAAGGAGTTATTGTT GCCTGATTCTGTGAAAGGTCTTAAGGCTCTTTTATCTGTTGCTGCTCATAAGAAACTTTGGTTCCCGAATCGGTTGCATA AAGACTTTCTTGAGGTAATGTTCACGAATAGGAAGGAGCGAGGTGAGTTATTGGAGGGCTTGGTAATAAGCAACAAAGAC GTCAACATCCCAAATTTTCCGCAGAGGATACATCTTCTCTGGGGTGAGACTGATCAAATTTTCAAGGTGGAGCTTGCCCA AAATATGAAAGAGTATGTCTAG
Protein sequence (LotjaGi4g1v0117800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVNLVAAQRPLMHGLMKMAGIRPYTVEIDSGTVMSFWVPSETISKPKKKDEKPEIVAKPTKPTVVLVHGFAAEGIVTWQF QVGALTKKYAVYVPDLLFFGGSTTDKEDRSPGFQAECLAVALRKLGVEKCVVVGFSYGGMVAFKMAEMYPELVQAMVISG SILAMTDSISESSLQELGFSSSKELLLPDSVKGLKALLSVAAHKKLWFPNRLHKDFLEVMFTNRKERGELLEGLVISNKD VNIPNFPQRIHLLWGETDQIFKVELAQNMKEYV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 271 | 270 | 9.3E-140 | – | |
| PANTHER | 2 | 271 | 270 | 9.3E-140 | – | |
| Gene3D | 54 | 273 | 220 | 3.4E-36 | ||
| SUPERFAMILY | 60 | 272 | 213 | 1.28E-33 | ||
| Pfam | 62 | 180 | 119 | 1.4E-20 | ||
| PRINTS | 88 | 103 | 16 | 7.9E-8 | ||
| PRINTS | 132 | 145 | 14 | 7.9E-8 | ||
| PRINTS | 146 | 159 | 14 | 7.9E-8 | ||
| PRINTS | 250 | 264 | 15 | 7.9E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0117800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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