Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0147100 |
| Transcript ID | LotjaGi4g1v0147100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT1G55690.1 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|Q501H5|SFH13_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH13; TrEMBL-Plants: tr|I1MML5|I1MML5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0147100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:23765256..23771048) extracted from Lotus japonicus Gifu genome v1.2.
CATCACGTGTCGTACTTTGAATACGTGTCAATATTCACCAAAATTTACATTTTAACCCCACTCTCTCTAGTCTCTACCCA TAGGATGCCACATGCTAATGCTATTCTACTTCTACTTCTCTACTATAGCTAGCTACCATCATTATTCCCTCTCTCTCTCT CTCCACAACCAAACCAAAGTGAGTTAGTGTGTGTGTTTTGCTCTCTCACTCACTCACTCTCACACTCTCACTCTCACTCT CACTCTCACTCCTCCTCTGTTCTCTGAGATCCACAACAACCTCAACCAAAAACCAAAAATCAATCGTATGAGTATGTCTT TCTTTGATTCTCTCAACTCAATTAAATGCCATTGTTTTAGTTTTAGTCATCTCATTTCTCACAACACACACAAACCAAGA AGAATCAATACCAATAACAATAACACACAAACATTATTCATCACTACTACCACATTATTATTTCATTTTTTCTTTTCTTT CTTTTCTGCATCATCAATATCATCAATTCTTGTCTATTAATAAATGCACTTTGTTTTGTTTTCTCATTCAACAGTCGCAG GAACTCAAATCGAAAATGTCAGGTACTATGTTCTCGAATCACTGTCTTTATTTCTCAATTTTTGTTCAATTTCATGGTTA ATTTTATTGACAAAATGTGATGTGAAATAGGGTTTGAAGAAGGTGCTGGTGTTGTTGTTGTTGATGGTGGTGAAAACTCT GAAGAAAGATCAACGAGAATCGGAACATTGAAGAAGAAAGCGATTAGTGCTTCTTCCAGGTTCATCACTCACTCGCTGAA GAAAAGAGGGAAGAGGAAAATCGATTTCAGGGTTCCCATTGAAGATGTCAGAGATGCAGAAGAAGAATCAGCTGTTCAAG AATTGCGTCTCAGACTCATTGAAACTGGGTTCATGCCTCCTAGGCATGATGATTATCACACATTGTTAAGGTCTGCAATG CAATTCTGCATTCAATTAATTAGTCAATTAATTTCATTTTTGTTTAGCTAATTCACTCACTAATTTGAATCTGCATTTTG GTTTTTTTTTTTTTTGGAATTAGGTTTCTGAAAGCTAGGGATTTTAACATTGAGAAGACGATTCAGATGTGGGAGGAGAT GCTAGTTTGGAGAAAAGAGTATGGGACTGATGCAATTCTTCAGGTAACGGTGGTGGTGATTAATGAATTCTGCAACTTGC AAAGTTTCATGGGTTTTTTGGGATGAAACTGTGAGTGCATTCAATGTTTTTTTTTTTTTTTTTTTGAGTAATGAGTGCAT TCAATGTTACTGGTGCTGCTAACTGATGAATTTTAATGTTTTTTATGTCAAAGTCAAAACATTTATTGTGAGAATATCTC AACGATGGATTAATGTTCCGTTACTAATCAAGGGTACTGTAAGTGGTACCTTTTTTTCTGGAGGCACCTTAGAAACTTGC CATTGTTAGGGAAGTGAGGGAGGTCAATATTTATGATTTTAATTTTGAAATTATTTAAATTATCATCCATCCAATCACAT GTCAGGCATGTTTGTTGAAGGGTTTGACTTCTCATGTTTGGACGTTTTTTGAGCATGTAATTAATTGAAGGATTTGGATC TTACTGTCCTATTTCTGTATATCAGAGTATGATTTTCTTAGAGAAATCATTTCAAGGTAACTGGTGGACCCTACAATTAG TCATGGATAGTAAATAAGAATTTTGTCTTTTATTCTTCAACAAGACAATATCCTCATAAATAAGGGAGATCCAAACACAA AATTACATTAGTGTGAAAAGATTGAGAAAGGGTAACACACTTTTTTTAACACCTTTTATTATTGGTTTATTCTATAAAAA CCAATAGAATCTTTTTTAGATTATGTATTAATGAAGTATCTAAATTGAACTTTTAGATAACCTTTTAGGAAATAGACAAA TAGTAGAGTGCGTATTTAGCCTTCTTTGAAATGTTTTAAAGGGGATATAAGCTTTAACTTGATATATTCATTATTCCATT ACTTGATTTGTTTTAACAACTGCTACATTAGATTGATTTCGGTTTTGGTTCAAACAAATTCATTCTGTTGTGTGATATTT GTGTATTTTGGCATTAGCTTGTGTTCTATTTTAGGATACACTTGATAAAGAATTTAGTTGGTTGGGTCTAATGCCATAGT AATATTTGAAGGATTTCGAATTTGAAGAGCTGGAAGAAGTACTTCAGTATTACCCTCAAGGTTATCATGGAGTTGATAAG GAAGGTAGGCCAGTTTACATTGAGAGGCTTGGGAAAGCTCATCCAAGCCGCTTGATGCGCATCACAACAATAGATCGATA TCTAAGATACCATGTCCAGGAGTTTGAGAGGGCTTTGCAGGAGAAATTCCCAGCATGTTCCGTTGCAGCAAAGAGACGTA TCTCTTCAACCACAACAATATTGGATGTACAGGGCCTGGTACGTTGCGCTACACTGAATAATTATTTTCTTAAGATTGTG TGCCTCATCAATAAATGATAGTGTATGCCTTTTAGTTTATACTGGTCTGTGATTGTTAATTATTTATGTACCTAGGGTTC AAGTGTTGTATCAGTTCTGGTACTCACTTTCAATGTGATGTCCTTAGTTATTTCTTATTTTCAGGATCTCCCTGATTTTT GGTACATTTTCCTGCTAAACTAACTGGCACTTGTCGATGTCTGTAATGCAGGGAATTAAAAATTTCTCGCCTACTGCTGC AAATCTCTTGTCTGCTATCACAAAAATAGATAACAGTTACTATCCTGAGGTTTTTATACTGTCCCTTCTCAAAGTATATT GTTCTTCAGTCCTCATCCTATGTATAAACATTCAAGATATATTTGCAGACATTATACCGAATGTATATCGTCAATGCTGG TCCTGCCTTTAAGAAGATGCTTTGGCCTGCTGCACAGAAGTTTCTTGATGCCAAAACTATTGCTAAGATACAGGTGAAGC ATTATAACTTACAGTTGACAGTATTTCATACACTATTTTTCCTGAAGTCCTACTGATATTACATTACTTTCCCAAAATTC CAGGTTCTTGAACCTAAGTCTTTATGTAAATTAATGGATAACATCGACTCTAGGTAAGAATCTATGCCTTCATATGGCAT TACAGTGTTTTTATTCCGATTACTGTTAACTTTGTAGTTGCATCTGTACAGCCAGTTGCCAGACTTTTTGGGTGGCTCTT GTAAATGCCCTGGAGAAGGTGGATGTCTTAGGTTTAACAAGGGTCCATGGAATGATCCTGATATCATGAAGGTAATTTGG CTCTGCTATTTCTTGTTTTTTTGTCCTTTCTGTCAGCTTTTGGGGATATCTATGCCTTAGAATTACTTTGTTGAATGCGT ATTGGGATACTAATTTAGGTATTATAATTTTAGGTTGTTCATAATGTGGAGACATCATTTATGAGGCAAATCGCCAGAGG GTTCAATGAACAACAACAAATGTTTGACTCTTTTCAGACACACCAACAGCTGGTAAATATCAATCTTCTAGACATTGATG GTTAGGATTTTACAAATGATAGCTTTAGATATCATATACTATTATTTTCTTTTGACTTCAATTTCTCATCTCTCAGGGAC GGCACAGTGATATGTCAACAGCAGAATCTGGGACAGATATTGATGATTCTTTCTCACCCATCAGACAAGGGACATTTACT TATCCTCATTTAGCCCCAGTTCATGAAGAAGTGAGTTTTGAATGAAACCTTTTAGTCTGATTCATTTTAAAACAATTATT TTTGTTATTTCATACTGCTTTCACATTATGTGTGTCTCTTGAGCCTTTCTTCATTTAAACGGCCATTTATTCTGCAGGCT AGGATATCAGATAGTTACCATAGTTGTAATGAGAGGGCTCTTGCAGCAAAGAAAGTTCTCAAAAGTGATCAATTTAACCT TACTCAGGAAAAGTCATTGCAAAATGATGAAATGGGGAATGCTGCTTGCACGGAGAATTCCAAAGGTAAAGTGTCAAGTT ATTGAAACATCTGTGTTCCTTTTGTAAATGCTTTTGTCGAAGAATATAATTGTACATATGCCTCAGTTACAACACTTTGA TGTGGAATCCAAGCTGTAAATTTGCCTTATTTTGTCACATTTCAATGTGCAAGTTGGAAACTAATCAATCTAATCTGTAT CAGTAGCAAGTATTTCAGTATTTCCCTGATCTTGTTCGACACATTCTCATTTTTTACAGGAGGATTTGTCAGCAGTTGGC TCAGCTCTGTTAAAGAAAACGTGGAGAAAACAAATTTCTTATATGTGCCAAGAGTGCTGATATATTTTTCCGAAAGATTA GATATGTTCTTCCATAGTTTAGGAATAAAACTTTGGAGAAGACAGAACGATATTCACCCATCTATTGCCAGGGAACAGAT CATAAAAAATCATACAGCAGCGGGTGAAACAGTTTCTGAACAGGATCATATTCATGCATGCATAAAACGTCTTCAGAGAC TAGAAAAAGCATTCGAGGAACTTAGCCATAAACCTGCTAGCATACCTCTGGAGAAGGAGAAAATCCTGATGGGTTCCTTG GATAGGATTAAATCTGTTGAGTTGGACCTTGAACAGACTAAGAGGGTATCCCTCTATACTTTGTTCAATCATCTAATATT ATTGATTGTTCTGATGATATGATGTTTGTAGTTTGTGCTATTAATGCAGGTACTGCATGATACAGTGATGAAGCAGTTTG AGATTGCTGAGCTTCTTGAGAATTTGCGGGAATCGAAGTATCAAGTAGGTTGCTGTTTGTGTAATACTTCATAGATTCGA ATATTTTACATGTTTTTCTTTGTTGCCGTTTTTTACAGAGTTCCAAGTCTAAAGTGGGTTGTGTTAGGTCATTAACAACT AATGTAAAACTTCTATACCAGACAAAAGGTGCTAGGTTGTTGCTTGATAGAACACAATGATGTCATTTAGTTCCTGTAGC TAAATCCACCTTCCTGCATCGCTTTTGCAGTCAGCTATGAACAAATTGTTTCCTTCTTTAACATAACATAATTAAGATTG TCCAAATTGAACTCAGGGTTGGACCCAAGCATATTAAAAAGGGGATCACCCCCAGAGAGAAACAAATTCTTAATAAAGCA GTATTCAAATATTGTATTCGCACCCACCTATAACTTTTTACACTTGTTCACTTAGCCATTCTTGATTTTACTTGGTGTGT GAAATTTTCGTCCCCCTTACTCATTTTTCCTAGTCCTGTCTTGAACTTGCGCAATACACACTTTAGTTATACTACAAGTT ATCAGAATTCCAATAGAAAAAACCTACTGAAAACAATGAAATTCTATCTGCAGTTATTATTAATATTGACTGAATGACAA TTTTCTTGCAGAAAAGAAGGCTGTTTTGTTGAATGATTCAAGTCACAACAAGTTGTTGTTGGCTCTTCAGAAAGACAATT TCAACAAGCACCCCCGTTTGGTCGCAAAAGTACTTATTGGTGCTTATTTAGTGCATTTCTAGTAGATAAGCGCCAAACAG GCAAGTAGAAGAAGACTTAGTGCAAGCTCACATGTTGGACCCAAAGAAGGCGTGGGATTATACAGTTTCATTATTATATT AGTTGCTGCAGAACATCCGTAGAGAAACCTGGGGATGAGGCAGTCCTCAGTTTTTATACATATATAAAATATAGGCTTAA TTGCACTTGTGGTCCCGTATTTATGCTAATGTGCAAACGGGGTTGCCATAGTTCAAAATGAGCTATTGGAGTCCCTAATG TTTTCACCCGTTTGCAGTTTTTGTCCTGCAGTA
CDS sequence (LotjaGi4g1v0147100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCAGGGTTTGAAGAAGGTGCTGGTGTTGTTGTTGTTGATGGTGGTGAAAACTCTGAAGAAAGATCAACGAGAATCGG AACATTGAAGAAGAAAGCGATTAGTGCTTCTTCCAGGTTCATCACTCACTCGCTGAAGAAAAGAGGGAAGAGGAAAATCG ATTTCAGGGTTCCCATTGAAGATGTCAGAGATGCAGAAGAAGAATCAGCTGTTCAAGAATTGCGTCTCAGACTCATTGAA ACTGGGTTCATGCCTCCTAGGCATGATGATTATCACACATTGTTAAGGTTTCTGAAAGCTAGGGATTTTAACATTGAGAA GACGATTCAGATGTGGGAGGAGATGCTAGTTTGGAGAAAAGAGTATGGGACTGATGCAATTCTTCAGGATTTCGAATTTG AAGAGCTGGAAGAAGTACTTCAGTATTACCCTCAAGGTTATCATGGAGTTGATAAGGAAGGTAGGCCAGTTTACATTGAG AGGCTTGGGAAAGCTCATCCAAGCCGCTTGATGCGCATCACAACAATAGATCGATATCTAAGATACCATGTCCAGGAGTT TGAGAGGGCTTTGCAGGAGAAATTCCCAGCATGTTCCGTTGCAGCAAAGAGACGTATCTCTTCAACCACAACAATATTGG ATGTACAGGGCCTGGGAATTAAAAATTTCTCGCCTACTGCTGCAAATCTCTTGTCTGCTATCACAAAAATAGATAACAGT TACTATCCTGAGACATTATACCGAATGTATATCGTCAATGCTGGTCCTGCCTTTAAGAAGATGCTTTGGCCTGCTGCACA GAAGTTTCTTGATGCCAAAACTATTGCTAAGATACAGGTTCTTGAACCTAAGTCTTTATGTAAATTAATGGATAACATCG ACTCTAGCCAGTTGCCAGACTTTTTGGGTGGCTCTTGTAAATGCCCTGGAGAAGGTGGATGTCTTAGGTTTAACAAGGGT CCATGGAATGATCCTGATATCATGAAGGTTGTTCATAATGTGGAGACATCATTTATGAGGCAAATCGCCAGAGGGTTCAA TGAACAACAACAAATGTTTGACTCTTTTCAGACACACCAACAGCTGGGACGGCACAGTGATATGTCAACAGCAGAATCTG GGACAGATATTGATGATTCTTTCTCACCCATCAGACAAGGGACATTTACTTATCCTCATTTAGCCCCAGTTCATGAAGAA GCTAGGATATCAGATAGTTACCATAGTTGTAATGAGAGGGCTCTTGCAGCAAAGAAAGTTCTCAAAAGTGATCAATTTAA CCTTACTCAGGAAAAGTCATTGCAAAATGATGAAATGGGGAATGCTGCTTGCACGGAGAATTCCAAAGGAGGATTTGTCA GCAGTTGGCTCAGCTCTGTTAAAGAAAACGTGGAGAAAACAAATTTCTTATATGTGCCAAGAGTGCTGATATATTTTTCC GAAAGATTAGATATGTTCTTCCATAGTTTAGGAATAAAACTTTGGAGAAGACAGAACGATATTCACCCATCTATTGCCAG GGAACAGATCATAAAAAATCATACAGCAGCGGGTGAAACAGTTTCTGAACAGGATCATATTCATGCATGCATAAAACGTC TTCAGAGACTAGAAAAAGCATTCGAGGAACTTAGCCATAAACCTGCTAGCATACCTCTGGAGAAGGAGAAAATCCTGATG GGTTCCTTGGATAGGATTAAATCTGTTGAGTTGGACCTTGAACAGACTAAGAGGGTACTGCATGATACAGTGATGAAGCA GTTTGAGATTGCTGAGCTTCTTGAGAATTTGCGGGAATCGAAGTATCAAAAAAGAAGGCTGTTTTGTTGA
Protein sequence (LotjaGi4g1v0147100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSGFEEGAGVVVVDGGENSEERSTRIGTLKKKAISASSRFITHSLKKRGKRKIDFRVPIEDVRDAEEESAVQELRLRLIE TGFMPPRHDDYHTLLRFLKARDFNIEKTIQMWEEMLVWRKEYGTDAILQDFEFEELEEVLQYYPQGYHGVDKEGRPVYIE RLGKAHPSRLMRITTIDRYLRYHVQEFERALQEKFPACSVAAKRRISSTTTILDVQGLGIKNFSPTAANLLSAITKIDNS YYPETLYRMYIVNAGPAFKKMLWPAAQKFLDAKTIAKIQVLEPKSLCKLMDNIDSSQLPDFLGGSCKCPGEGGCLRFNKG PWNDPDIMKVVHNVETSFMRQIARGFNEQQQMFDSFQTHQQLGRHSDMSTAESGTDIDDSFSPIRQGTFTYPHLAPVHEE ARISDSYHSCNERALAAKKVLKSDQFNLTQEKSLQNDEMGNAACTENSKGGFVSSWLSSVKENVEKTNFLYVPRVLIYFS ERLDMFFHSLGIKLWRRQNDIHPSIAREQIIKNHTAAGETVSEQDHIHACIKRLQRLEKAFEELSHKPASIPLEKEKILM GSLDRIKSVELDLEQTKRVLHDTVMKQFEIAELLENLRESKYQKRRLFC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 608 | 608 | 0.0 | – | |
| PANTHER | 1 | 608 | 608 | 0.0 | – | |
| Gene3D | 57 | 122 | 66 | 8.3E-16 | – | |
| SUPERFAMILY | 64 | 131 | 68 | 4.05E-18 | ||
| Pfam | 88 | 114 | 27 | 4.9E-7 | ||
| SMART | 90 | 115 | 26 | 1.2E-8 | ||
| Gene3D | 123 | 336 | 214 | 4.2E-66 | ||
| SUPERFAMILY | 134 | 331 | 198 | 6.54E-51 | ||
| SMART | 135 | 307 | 173 | 4.6E-52 | ||
| ProSiteProfiles | 135 | 310 | 176 | 24.752 | ||
| Pfam | 138 | 305 | 168 | 6.9E-30 | ||
| CDD | 146 | 304 | 159 | 2.54669E-35 | ||
| MobiDBLite | 358 | 379 | 22 | - | – | |
| Coils | 527 | 547 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi4g1v0147100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…