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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0171100 |
| Transcript ID | LotjaGi4g1v0171100.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor GTPase-activating protein; TAIR: AT4G17890.1 ARF-GAP domain 8; Swiss-Prot: sp|Q8H100|AGD8_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD8; TrEMBL-Plants: tr|I1KX25|I1KX25_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0171100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:33442581..33448936) extracted from Lotus japonicus Gifu genome v1.2.
AAAAAAAACACATGAACAAGATTTGCGGTTTCACCTGCAAAATTTCCTCCCCAAATCTATATTGCTCAGGAGGTGTTCCG GTTCCACCAAACACCCCCTGAGATTCCACCGCAACAAAAAGAGCAAGATTTTCTTCAATTCAAATTCAAACTTCCATTTC CCTTTCGTTTTTCATTTCTGTTTTGATTCTCATTTTCGGCCTCCAATGGCGTCTGAAGGTTTCACCGACAAGAACACTGT GTTCAGGAAACTCAAGGCGAAGTCTGAAAATAAGGTTCTTCTTCTTCCCCTGTAAAATTTTCATTTCAATTTCAATTTGA ATTCATAGGAATTTTTTATTTCACTTCCAATTTTTCACGTGCATGCTGCGTTTTTTGTGATCGGATTTCAGATCTACGTT ACCCGTGTATATGCGTTTGATTTCTGATTTTGTAGTGTTTTGTTTCAGATGTGTTTCGATTGCAATGCGAAGAACCCAAC CTGGGCGTCCGTCACGTATGGGATCTTCCTCTGCATCGATTGCTCTGCCGTTCATCGCAGTCTCGGCGTTCATATCAGCT TCGTGAGGCAAGTTGTTGCTTGGTTTTTGATTTTCTATGCGGAAAGTGTTTGTGTCAGTTAGCTATTTGATCACTTAGCT GATTCTGTGTTGATAGTTTTATGTTGTGCAATGCTGAATGTGAAATTGCGGTTGGATTTAGCGGAAGTCTTTGTTTTACT GTGTTGTGTCATCTTTTATATCTTTCCCCATTTCAGATGATTAAAGCTTGAATAGTCAATGAAATTAATAATCTGTAGAT TGTAAAGGGTAAAATGATTCTTCAGTTCCCCTGAAAGCGGAATTCAATAAATAAATGATGCTGGATATTTATATTCTGCT TTCATTTTAGTGTGGTGGAGCGGGGGGTTGAGGAGTAGCATTGGTTTTACTTTTTTGTTGAAGGTTGGAATGCGGTTATT ATTATTGTTTCTCATAGCCTTTTTTTTATTTTCCTTGGGGTACATTATTGAATCAAGATAGGAGTCAGGATTGGATGAAT GATTGGTGATATAAGTCATTTTCTTGTGCTTGAATTGCAATATGAGATAAGGATTTAGACTTAGAGTTGAGTGTAATGAA GCAAACGTGGAACTAAGCTTGCTTCTCTAATGAGTAAAAGAGGTTTTGTAAGAGGTTTTGCACGAATATTTCAGTTGAGT TCAGGCTGAATGTTTGGATAAATTTGTGCAGCAGCCATTTGCCTAATAATATTCATTTTTTATGAGGGGATGGGGGTAAG CTGTAAGAACAATTTCTAAATCTACAAGAGATTCAATAAACCTCAGTATATCAGCATAATTAACTCATATTTTATATTAT TGTGCATTCCATGGGTTGTTTAAAAAGCATAGCAGTTTATCACTAAATTAAAACTTATCACCCTATGCTTCTGCATCTTT TGTTTTTCGCTTAACTATTCTGTGAATTACACTAAAATCAGAAGGGAGGAAGTGGTAAAATAGAAGAATGAGGGCAGAAA TGATTGATATCTAAATATTATATGCTTTATTATTTGTAGATCTACAAATTTAGATTCATGGAGTCCTGAGCAACTAAAAA TGATGAGCTTTGGAGGAAATAACCGTGCTCAGGCTTTCTTTAAGCAACATGGTTGGACCGACGGTGGTAAAATAGAAGCC AAGTACACATCCAGAGCTGCAGAGTTGTATAAGCAAATTCTTTCAAAAGAAGTAGCCAAAAGTATGGCTGAGGTGGCTAG CTTGCCTTCATCAACTGCTCCTTCTCAGTCTGGTCAAGGGGCTAATGCACTTTCTGATGCCAGGACCAATGAAGTAATGA AAAAAAACATTCTGGAGAATCCAGAAAAGCTTGAAAGCACTTCGTCACCTCGAATTGCACGTTCAGTAATTTCAAGTACT GTGAGAAAGCCTATCGGGACAAAAAAGACTGGGAAAGGCGGGGGACTTGGTGCCCAAAAGCTAACTAGAAAGGTATGGAT ATTTATCTTTGTTTGCAGATTGTATACTGGAATTGTTTGTTGGTTTATCATTATCTTATTCTCCTTTTTAATTTGGTGAT CTGAATTGTTGACAAAGTATATCTATGAAATGCAGCCAAGTGAATCTCTCTACGAGCAGAAGCCTGAAGAGCCACCTGCT CCGGTTGCATCCTCAACAAACAACATTATGCCTTCTCCTTCTGGACCATCTCGGTTCGAGTATGTAGAAAATGTTCAATC ATCCGAGTTGTATTCTGGAAGTTCAGATGTAATAAGTCATGTGTCTGTACCAAAGTCATCAAGCTTCTTTGGAGACTTTG GAATGGATGGTGGCTTTCCAAAAAAGTCTGGGTCAAGTTCCTCAAAAGTTGAAGTAAGCATATATACCTGCAACTTCACT CCTGCATAAATTAACTTTTACTGTATGTGGTCAGCATACAAAATTAAGTTAACCATGATTCTCTTCAAATTTTGATGCTT AGTTGTCATCTTGCTCAATGCCTTTAACTAGATACAAATCTATGGAGCAAAAGTTTGTGGTTGCAACTTAGTCAGAAAGT GCTAGGATGTAAATATTTTTGAAAAGAAAAAATGCTAGTATACACATGTAGAATCATGTATTAAAATGCATTCCATGTTA ATTACAAGAAAACTTAACATTGCAAATGTGTTCTAAAATAATTGCGGACTTCCGTAAGTTTTAATGCAACATTAAGCTCT CTAAATATATTTTATGAGGGTTTCAGTGTACTTTCAAAAACTTGGAGATTTGTGTTAGGTCAGGATGGCTGAATACACCC TGATTAGAAGCGAAATTATTGTTTCCTCTTATAATATCATTCTTTGATCTTGGTTTTTGATAAGAACCTTGGGAGAACCA CACCACAAAAGCTAGCTGTTGTAGTTGGAGAACCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAAATTCC AATGTGGGACTCAAGTCCCATACCTTGCAATGGGGTCCTAACATCCCACCACGCTCCGCAGCCCCGGCGCCCACGCGGGC TGGCTGTGCACTAGCCCCTTGACTAGTCCCAGGCGAACACTGCAATGCCGGGGTCACCACTTGCGCCGCTCGTTTGCAGC TCAGAGACATGGTGGAAGGCTCTGATACCATTGATAAAAACCTTGGGAGAACCACACCACAAAAGCTAGCTGTTGTAGTT GGAGAGCCCAAGGCCTTATAAACCCCACATTAGAATCCCATACTTCCAATGTGGGACTCAAGTCCCATACCTTGCAATGG GGTCCTAACAGTTTTGCAGGATGACCTTCAACATTCTTTAAAAATACAATAGATAACTATGACTTCACTGAGAAGTTCCA GTAATAGGAAACTTAAACAAGTCTCAGCTTGAAAACTCTAGAAAGAAATTAACCATCATTACTTGGCAATTTCCTGTTAC ATTATCCCACAACAAAGTATGGAGCGAAGTAACAAATATGCATCTGAACAAAGATAAACCAATAGGACCATAATTGTGCC TGTTTTAACATTGGATTGTAAACAAGCATTATTTCAGGCATAGGCTAAAATATATTAGATTAGCATTGGACAAATTAGTT CTTTTGCTACCAAATCATAATGAATGCTTTATTTTTATTAAAAAAACTGTATATTTGTTTTGCACTCCTGTAACCTGTGA AAATTCACATATCTTGTCTGACTTCAATATATGTTGCCAGTCATCTATGGAACATGTAGTTAGTGGAATTTTACAAATTC ATTTTACCTGCACCACATGAATCTTTGTTTATCTTGTTTTGCGGTGTTCTGGTATAAGATTCAGGAATCTGATGAAGCAA GAAAGAAGTTCTCAAATGCTAAATCTATATCTTCATCCCAATTTTTTGGAGACAATAAGGCTGCAGATGTGGAAGCGCGA GCTACTTTGTCAAAGTTTTCAGTATGTGTCTTTTCTTTAAATAACTTGCTGGAACATATAGTGTTAGAAGTTTTCAGTAT GTGTCTTTTCTTTAAATAACTTGCTGGAACATATAGTGTTAGATTATACATGAATGCAGATCTTAGATGTTCAATCCCTT TTATATCTTATTCTTTTGATTGGCAGAACTTATGTTAATGAGAAAATTTCCAAATTCGTCCGTAAGAAATTTGGTGATGA ACACCCTGGTACCAAATACTAAAACCTCACCTTAGTCCCATGGGAACCACAAATATCAGTCATATTAGGCAGTGGATAAC TATGATTGGCATTTGTGGTTCTTTTGGGAATAGAGTAGGGTTTCAGCATTCTGAAGTACTAATTTAAATTTATCATTGCG CCAAATTGCCCAAGGACGAATTGGGGGATTAACTCTAGTTTAACTAATACGAAAATTAAGGGCCAGATGTATAAGTTTCT TTCTAAATTTTATTTCATAATAAATACGAATGGATTTTGTACTGTCAAACTAGTCCTTTCTTTGAAGACAAATTCTTCTA ACTTATGTGTGTTCAATGGATCAGTTTTCTTTTCTCATGTCCTGTCTGTCTGTAAGGACCAAATTTTACAAATCACCATG ATTGTGACCTTGGAAAGACATTATTATTATGAATAAAAGAGGGGCTGAAATTATTTCTGAACATCCTCAAGGAAATTTAC TGTTAAACTAAATATTACTTTTTCAAGTATAACCCGCTACTGAGTGATGTCTATGACTGGAAATTCATTTGCTGTTTAGT TTTAATTTGGTCTTGTAAATATGCTTAAGCTAACTTTCTTTGTTATTGAATGTGTGTAGTAGTCAATCAATTTCATAGAT GGGATTTAAACCTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAAGGTAGTGCAAACCTTAA CTCTTGAGCTAGCTTTTGTGGTTGAGTATAGGCCTCCCAATTTCTAATATGGTATCAGAGCCTATCCTAGATCCATTTGT TGTTTGTTGTGGAGACTTCCCATATTTGGGGCACCCGTTGTTGTTGATCCCACGTTCCAGGTTGTTCAGTCCTGCACGTG AGGGGGTGTGTTAGAAGTCCCACATTGGCTAGAGATAGAGCATAGATAGCCTTTATAAAGGTAGTGCAAACCTTAACTCT TGAGCTAGCTTTTGTGGTTGAGTATAGGTCTCCCAATTTCTAATAAAACCAATCTTGCTTTTCTTGAAGATAGGAATTCT CTTAACTTGTTGAGATTATTCATTATGGGCCAGTGTTGGTTGAGTGGGATGGGTGAGAGAAAGAAGTTTCAATTTTCAAT TTTTCATAAAGTGGTTTTCAGCATGAATAAATTCTTTTCTTTAATTGCTTCTGTATATTCTAGATTTGATGTGTTACCAA GCATGAATAAATTCTTAGTTTGAAGTTCTGTCTCTGAAACCTGGAATGGATAAGAAAAAGAAAATTGGGACGTGGGAGTT TAATGTATTAGTTGACATTTGACAGTGTTTATCCTCTTGTTACTTCCAGGGTTCGAATGCCATCTCCAGTGCTGATCTAT TTGGAGGCGACTCAGGAGACTCTTCCATTGATCTTGCTGCTAACGTTCTGCTCAATAGATTATCTTTCCAGGTATTCCTT ACATTATGGCCGGAGACAAATTTCTTTCTTCATGTTCTTTGTTATTCGAACAATGAAATTATAATTAAATTCTGGGCTTT AGTTCCTGTATTGTTGTTGGGAATAATGTTACTTTCACACCTCTAAGAGAGGTGGAAAGAGGTGGAATGAGGAGAGAGAT AGGAAGAAAAGAAAAAATAAGAGAGAGAAAGTATGTGATGTGATAGATGATGAGAGGAGAGAGATAGAAATGAAAATAGG TGGAAATGAAGTGTTTAGATAATGAGGTGTCTACATATCATTATTGTTGTTGTTGGGTTTGGTGCTGATCCTCCCAATCC CTCCTCTTCTTGTTTTGCAGGTGCAAGAGGATCTCTCATCCCTCAAGAACATTGCAGGAGAAACTGGGAAGAAGCTTACC TCCTTGGCCTCCACCTTAATGTCAGATTTTCAGGACCGGATCCTCTAAAATTATATGTTCTATAATTAAGAGAGTCTTTG GAGTTTGATGCAAATACCACCACTTATGTTTCAAATGTAATATCAGGGTTCAGTATACAATTCTTTGATAAAATATAAAA TAAGATGCTATAATTTCTGGCTTGCCATTTAGGCAGTTTTTTTTATATGATGTACCAAAGGTACTTTTTGATGTTGCCAA TATGTTTTTATGGTTTATACTTTATTCTTTTAATTAGTCAATATCAGTTTGTCACAAACTCGACAATGTCATCTTGTATA AATTAATGAAAAAGCTTTCTCGCTTACATTTTAAAA
CDS sequence (LotjaGi4g1v0171100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTGAAGGTTTCACCGACAAGAACACTGTGTTCAGGAAACTCAAGGCGAAGTCTGAAAATAAGATGTGTTTCGA TTGCAATGCGAAGAACCCAACCTGGGCGTCCGTCACGTATGGGATCTTCCTCTGCATCGATTGCTCTGCCGTTCATCGCA GTCTCGGCGTTCATATCAGCTTCGTGAGATCTACAAATTTAGATTCATGGAGTCCTGAGCAACTAAAAATGATGAGCTTT GGAGGAAATAACCGTGCTCAGGCTTTCTTTAAGCAACATGGTTGGACCGACGGTGGTAAAATAGAAGCCAAGTACACATC CAGAGCTGCAGAGTTGTATAAGCAAATTCTTTCAAAAGAAGTAGCCAAAAGTATGGCTGAGGTGGCTAGCTTGCCTTCAT CAACTGCTCCTTCTCAGTCTGGTCAAGGGGCTAATGCACTTTCTGATGCCAGGACCAATGAAGTAATGAAAAAAAACATT CTGGAGAATCCAGAAAAGCTTGAAAGCACTTCGTCACCTCGAATTGCACGTTCAGTAATTTCAAGTACTGTGAGAAAGCC TATCGGGACAAAAAAGACTGGGAAAGGCGGGGGACTTGGTGCCCAAAAGCTAACTAGAAAGCCAAGTGAATCTCTCTACG AGCAGAAGCCTGAAGAGCCACCTGCTCCGGTTGCATCCTCAACAAACAACATTATGCCTTCTCCTTCTGGACCATCTCGG TTCGAGTATGTAGAAAATGTTCAATCATCCGAGTTGTATTCTGGAAGTTCAGATGTAATAAGTCATGTGTCTGTACCAAA GTCATCAAGCTTCTTTGGAGACTTTGGAATGGATGGTGGCTTTCCAAAAAAGTCTGGGTCAAGTTCCTCAAAAGTTGAAA TTCAGGAATCTGATGAAGCAAGAAAGAAGTTCTCAAATGCTAAATCTATATCTTCATCCCAATTTTTTGGAGACAATAAG GCTGCAGATGTGGAAGCGCGAGCTACTTTGTCAAAGTTTTCAGGTTCGAATGCCATCTCCAGTGCTGATCTATTTGGAGG CGACTCAGGAGACTCTTCCATTGATCTTGCTGCTAACGTTCTGCTCAATAGATTATCTTTCCAGGTGCAAGAGGATCTCT CATCCCTCAAGAACATTGCAGGAGAAACTGGGAAGAAGCTTACCTCCTTGGCCTCCACCTTAATGTCAGATTTTCAGGAC CGGATCCTCTAA
Protein sequence (LotjaGi4g1v0171100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASEGFTDKNTVFRKLKAKSENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWSPEQLKMMSF GGNNRAQAFFKQHGWTDGGKIEAKYTSRAAELYKQILSKEVAKSMAEVASLPSSTAPSQSGQGANALSDARTNEVMKKNI LENPEKLESTSSPRIARSVISSTVRKPIGTKKTGKGGGLGAQKLTRKPSESLYEQKPEEPPAPVASSTNNIMPSPSGPSR FEYVENVQSSELYSGSSDVISHVSVPKSSSFFGDFGMDGGFPKKSGSSSSKVEIQESDEARKKFSNAKSISSSQFFGDNK AADVEARATLSKFSGSNAISSADLFGGDSGDSSIDLAANVLLNRLSFQVQEDLSSLKNIAGETGKKLTSLASTLMSDFQD RIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 140 | 140 | 9.0E-54 | ||
| PANTHER | 2 | 403 | 402 | 4.5E-211 | – | |
| PANTHER | 2 | 403 | 402 | 4.5E-211 | – | |
| CDD | 8 | 123 | 116 | 1.77882E-83 | – | |
| SMART | 10 | 126 | 117 | 4.5E-49 | ||
| ProSiteProfiles | 10 | 128 | 119 | 26.261 | ||
| SUPERFAMILY | 11 | 124 | 114 | 4.05E-39 | ||
| Pfam | 11 | 107 | 97 | 1.6E-35 | ||
| PRINTS | 22 | 41 | 20 | 3.6E-24 | ||
| PRINTS | 41 | 58 | 18 | 3.6E-24 | ||
| PRINTS | 62 | 83 | 22 | 3.6E-24 | ||
| MobiDBLite | 132 | 149 | 18 | - | – | |
| MobiDBLite | 132 | 151 | 20 | - | – | |
| MobiDBLite | 161 | 241 | 81 | - | – | |
| MobiDBLite | 165 | 188 | 24 | - | – | |
| MobiDBLite | 222 | 241 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi4g1v0171100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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