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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0171200 |
| Transcript ID | LotjaGi4g1v0171200.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ADP-ribosylation factor GTPase-activating protein; TAIR: AT4G17890.1 ARF-GAP domain 8; Swiss-Prot: sp|Q8H100|AGD8_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD8; TrEMBL-Plants: tr|I1KX26|I1KX26_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0171200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:33465316..33472876) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGTCTGAAGGCTTCACCGACAAGAATGTTGTGTTCAAGAAACTCAAGACGAAGTCTGAAAATAAGGTTCTTCCTTT TTCATACTTTTATCATTCGAATTTTGAATTTATATGATTATTTGATTTCACTTTAAATTTTTCATATGCTTGCTGCGTTT TTGCTAGATCGAGTTTCAGATCTGCGTTTGGTTATTGAATTTTTTTGTGTGCGTTTTGTTTCAGATGTGTTTCGATTGCA ATGCGAAGAACTCAACCTGGGCGTCCGTCACTTATGGGATCTTCCTCTGCATCGATTGCTCCGCGGTTCATCGTGGTCTC GGCGTTCACATCAGCTTCGTGAGGTAAGTTGTTGCTTGATTTTGGTTGTTGAATGCTGAATTTGGTTGTTGATTTTTCTA TGCGGAAGTGTGCGTATCAGTTTGCAATTTTATTTTATGACTGACTCTATTTTGTGCAATGGCGAGGTCTGAATGTGCAA ATGGATCAATTTAGGGTAGTTCGTTAATTTACTTTCGGTGTCATCTTTTAGAAATTTCCCCAATTCAAATGGTTTAATGA AATCAGACTCCGAGGTATTGTCTGTAATACGTAGTTTGGAATTTTATTAGCAGTTTAACTAAATAATTTTGTAGAGGGGG GGTAGACATGGGATTTACATTTCATGGCATTGGCAGGTGGGAATGCAGGACATTTGTTGGAAATCAGGATAACATAAACA CGGAAAAATAGTTTATGAAATGGGTGGGATAGCTAAAAATATAGCTAGAAAAGCTTTTATCTATAGCAGCATTTTGTATG TGGGATTTATAATTGATTTGAAAATATCATTTTTGTGGGGGCAGGGTGGTGGTAGTGTTCAATTTGGTATTCATAGTACA TGACTTTGGTTTGAAGCTAGCTTTTAAATTGAGTTATGATCTTTGCACTGACTTCATTATCAGACCCTCCGAAATAGACT CATCTGGATCTTTCAGAAAAATTTACCGTGGAACCATGGGATTACCCATTTGTTTACATGAGAGTATGTGAGGACTCACA AAACCTGAGCAAGTATCCTTGTTTCCGATAGCATTTACTTTATTTTTTCTGTGTTACATGATAAGAGTCAGGATGGAAGG ATGAAATCCTTTTTGTTATGCTTTTCGAGTTGTGAGGTGGGGTAAGGACAGAGTGGGATAGTTGAAAATTAAAGAATCAA ACTTGGACCCCCCCTATAGGTGAGTTTACTTCTTTAATGAGTCAGAGGTTTTTTAAGACCAAGAGAAGACTTCACTTTTC TTCCCTGTGAACCAGCATTTTAGTTTTTTTGTAATGAGTAGATGTCTGGAAAAAAATAAGCAGAGAGCATTTGCTTAATA AAGTTTATTTGGGCCAGAGGGGTGTTAAGTGTAATTTCTTAATCTTGAGGGATTCAATAAGCCTCAGTTTTATCTCTAAA TTAAAACATCTAGCCTTTTGCTTTAGCGTCTTTGATTTATACATTGTTTTCTTTGAATTACATTTCAATCAAAAGGGAGG AAGTAATAGAAAATGAGGAAGAAGGCAGAATTGATTGATACCTAAATGTTTTTTCATATGTAGATCTACAAATTTAGACT CATGGAGTCCTGAGCAATTGAAAACAATGAGCTTTGGAGGAAACGGTCGTGCGCAGGTTTTCTTTAAGCAACATGGTTGG ACTGACGGTGGCAAAATAGAAGCGAAGTATACATCCAGAGCTGCAGAATTGTATAGGCAAATTCTTTCAAAGGAAGTAGC TAAAAGTATGGCTGAGGAGGCAAGCTTGCTTTCATCGCCTGTTGCTTCTCAGTCTGCCCAAGGGGTTAATGGACTTGCTG ATGTTAAGACCAATGAATCACCGAAAGAAAACACTTTGGAGAAGCCAGAAAAGCCTGAGAGTACTTCTTCACCTAGAGCA CACACAGCGGTATCAAATACTATGAAGAAGCCTATTGGGGCTAAAAAAGCTGGGAAGAGTGGGGGGCTTGGTGCCCGTAA GCTCACTAAAAAGGTATGTGGGTAGCTATCTTTATTTGCAGATTTTATGCGAGAAGAGCCTGTTGGTTAATTGGTTTATG ATTATCTTATTCTCTATTTTACTTTGATGATATGAATATCAATTGTTGACAAATGACTTCTGTGAAATACAGCCAAGTGA GTCTCTCTATGAGCAGAAACCTGAAGAACCACCTGCTCCGATCCCATCCACCACAAACAACAATTTATCTGCTGTGCCAT CTCTGACGTCTCGATTTGAGTATGTTGAAAATGTCCAGTCATCCGAGTTGAATTCTGGAGGTTCAAATGCAATAAGTCAT GTTTCTGCACCAAAGGTATCAAGCTTCTTTTCAGACTTTGGAATGGATAGTGGCTTTCAGAAGAAATCTGGGCCAAGCTC TTCAAAAGTGCAAGTAAGCTGCCTACAAATTTTGCCCCTGCATAGTGTAAACTTCTATTACATGTGATTATCATACGGTA TCTATTTATGCATCTCTTAAAATTTTGGTTGAGTCTCCATGCAGTTTCAAGTTCTTAACATGATACAGATCCATGGACGA GAACATGTTAGTCCTGGCAGGCTAGTGTTTTATAGAAAAAGAAATACTATCATACAAATTTAGAGTGGTGTGTTAAAAAT ACATTTCAGGTTAAATACACTAACAACTAAGCATTCCCAATTTGTTTTAAAAAACTTATGAGCTTCCCTAAGCTTTAATG AGGAAGAAATCTTCTTAATTCTTTTTTCAAGTTAGGCCGGTGTAATTTCAAAAACTAGGAGATTTGTATCATGTTAGGTT GGCTGAAGACCACTTGATTGCAAGTTTGCAGGTTGTGTGCTACTATGATATCATCATTATGATCTTATATGGTTTTGTAA GAGCACTTTCAATACACTTTAGAACTACAATTGTATAACCATGACGTCACCAAGGAGTGCTAGGAGTAGAAATGAACTTG AGTAAGACTCAATTGTCTCTGCATGGTTATTTTTCCAGTTCTTCCCTAGCTAATTGCCTTCGCTGACTCTGAGCACTATA GTGTGATATGCTTGACCTTGCATGTGGCCTTGTTTTTAACCTAGTTTTAAAGCGGTTCTTGTATCCCATATAGTAATTTG TAGCTTATGTGCTTTCTGGTTGATCTGTGATTCAATACCTAGGGTGTGTCTATATACCCTTCCTCCTCCAAGTCATATAG ATATGCATTCTTTACATTTGATGGCTGTTGATAGTGTTTTAAATCGCGCTATAGTGGCGCTATCTCACTGTCACAACGAG GAGCAGCCCCTGGCCGCTACAGAACTTCCTGGCGGGGAGCATTTTGCAGTCGTGCCCGAATTCGCAACCATTGTGGCGCT GTAAATCTGCTACAGGGAGGAAATCCTAAAAAGCCAAAATGCCCTCTGAGTATTAACATGAGGGATATAATATATATGGT TGTTTTTGGCTTTTCTGTTTGAAATAAGATTGAAAAAGACAAGTCTTCAAAGTCGACTCTCACTTAAATCTCCGTGCTTC CACTTCTGACAGTTGTGACTGCTTACATGTTCCACAGGAAATTTGTGCAGCCTGCAACTCCTTGGCTTTCGTAATTTGAA TTTTGTGAAGTTCACTATGAGAAAATATTTGAAATCCTTGAGATAGCTCTCGGGTTGCTTAGTACTTTTTTCTTTTTTTG ATTCCCAACCTAGTCAATGAACTCGGTTTGACCCATTACGATGCCCCACTTATTTCTCCTAATTTGGGCTTGGTTCAACT TTTTTCCTCCAAGAATTTCCCCTGCCTTTGAGTTGGAGCCCGAAATTTCACACTCACCTGAAACTTGTGTGTGAATTGTT CTGTAAAAGCTTGTCTCGTGTTGATAACGGCTCTAATAGCCAAGTGTGCCTATTTAGGTGGTATTGTGGCAATAGGCTTG TCGCCCCACTTGCTTCAGTTACTACGCTAGTAACCCATTTAGATTGTCCAACTGAGGGAACTAGAACACACAATGCCATT GCATTTGCTCAAAAACCAAACTTTGTGGGATATTATTGACCATGAGGTCACTTTTCATAATATCTTCCAACATCCTTTTT GGCCTCCCTCTACCCCTCTTCGCAGCACTAAGAACCATGTTATCAACCCTTCTCACTGGTGCCTCTAAAAGTCTTCTTTG CACATTTCCAAACCATATTAACCGATTTTTAGCCATCTTCTCCTCGATAGGTGCCACAGCAATATCTCCTCTTATACAAT CATTTTGCATCATGTCTTTTCTAGTGTGTCCGCCAATCCATCTTAACATTCAAATCTACATAGAGGATAGCTGGTCATAT AGCTGTTAATACTTTCCTTTGAGCTTGGTGGGTACTTAACAAACTTATACAGCTAGATAAAAATGAACCAGTTAGTTGAC AACTTAATAATTTCCTGCAACATAATCCCAAAATAAAATATATGGAATCAAACAACACTGACAATATGTATATGAACAAG TATTAAGCAGATAGGACCGGCTAGACTTGCCAGATTTATTGGTATTATTTGGCAAGCATTTTTGCAGTCGCAGGCTGAAA TTTTATCTATGGACTTATTAGTATTGTGCTACACTGCTACCTGATCTTAGTGACTTTCATTTACATCTTATCTGGCTTAA ATGGATGTTGCAAAACATCTGTAAAAGCATGTACTTGGTGCTTTTTTCCCAAAAATCCAGTTAATCATCATCTTATGAAT TATCTATTTTTGGCCATGCACCTTATTTTGTTTTGTTGTGTCTGGTATAAGATTCAGGAATCTGATGAAGCAAGAAAAAA GTTCTCAAATGCTAAATCTATTTCGTCATCCCAATTTTTTGGAGATCAGAGCAAGGCAGATGTTGAAGCTAAAGCTACTT TATCGAAGTTTTCTGTATGTATCCTACTGTCTTTTATTTTAGTAACTTGCTGGAACGTATAGTTAGAATACACCTTTAGA TATTGGATGATCAATCCCCTGTTTTAATACTATATTGGATAACTTATTTCATAATTCATTGATATGATCTTTTGATTGTC GGAATGATCGTATCAATAAATCACCCAAATTCATCTCTAAGAAATTTAGTTGTAGACATGTTAGTTCTGAAAATGGAAAC CCCACCCTAGTCTCCTAGGAACCGCAAATATCAGATATAATAGTCTATGCACTGGACACGATAGTCTCTGCAAAAGACTA ATATGATTTACATTTGTGGTTCTATAAGGACTAGACCAGGGTTTTGCATTATCAAGCACTAATGTATCCATCACCAAATT TCTCGACAAATCTGGATATAAGTTAAGGGCCAGATGCATAAGTTTCTGTCAAAAGTTTATTTACTAATGAAGATTACATA TGAATAATTTTGTTCTTTCAAAGTAGTCTTTTTTAACGAAGTTATGTAATTCTTGACATGTTTGTGTTCTCTCTGTCATA GATTTCTTTCCTTCTTACTAGCCATAGGGATCGCTGATTATTAATGTCCTTGGAGAACCTTTGTTTTGATAAACCAAAGA CTGGCCGAAATTTATTTCTGAACACTTCTTCTGAAACATTCCCATTAACTTTAATGTTAAGATTACTTTTTGGTATAACC CATTTTGAAGTGATATCTATAAATTAAAATTAATTTCTGGTACTTCTTTTATATGGTTTCATAATTAGCTAAACTAAGTT TATTTGTTACTGATACAGATAGTAATTTATCAATTTAATACATTGAAATTAACCCAAATCGAGTCTTAGACCTTGCCTTT TCCTGTTAAAAAAAGAATTCTCTTAATTGTTATTTGAATTCATCATAGGCTAGTGTAGGTTGAGTGGGAAGAGAGAGAAA AAGAAGTTCCAGTTTTAATAGACTGATTTTGGGAAGAAAAAGAAAAGGTGAATGCATATAAACTGTGTCTACCTTTTGTT TGTTAAGCAACCCGTAAAAGTCTGAGAGAAGAAATACTATCTCTGTCATAGATGTTTTATCATGGACATTACAAACTTGT TCTATTCATGCAAATGTAAAATAGTGAAATATTTCACATAAATCTGCTGGCACACGTTGAGTAGTTCCTTGTGTGATTTA CAGCATGTTTGCATAATTATTCTACTCCTACATCAGGATATAATCATGGAATTGATTTAATTTTGAGAAGCTAGTCTTTG TAGATTTTAAATATTAGAATCGATTTTGACTCGGTAGACGAAAAACCAAGTTCAAATTGCAATTAACTGTTAGATAATGG AGGAAACCCTCAATCACGTTTTAAAAGGATTATGTATCATAATTAGGTGTTTGGCAGCATCTTAGGTTAGATAGGTAGCT TTTTAGTTAGTTAATCTAATAGCTAAGATATTGGTTAGAGCGTGGTAAGGGTGAGGCATATAAAAGAAAAGGTAAGATTA GAGGGGGAGGTATATAACAGAAAAAGGTAAGATTTCAGGGGGATATATGTTGTATTGTGTGGGGATTTTGGCAGAGGTCT GCATGTCTTTAACATCGAGGGAATTTCATACTTTCTGTAGTTGTTACCTACTCATGGTGCTTGCCCACATTTGGGGCAGG ATTGGATAAGGGATTCAATAACTAGACTTTCATTTCTCAATTCTGTACCAGATCTATTACAACATCTATTTGGTGTAATG CCCTTTTAATAGCATGTCACTAATGGATATGTTGATGGATTGGGTATCTGTGGGAATCATTTCTCTTTTTTTTCTGGGAT GTTTGAAATATAATATAAAAGGATTCATATATCTTCACCAGACTGCTTAAGCTTTTGGGATAGTAGGTTTATAACATGGT ATCAGTCTCTATGACTAAGTCGTCTCAAGTTTAGTCCTTGTTATTTCCCATTATTCTAATAAAAAGTTCAATTTAAGCAC AAGGTAGGTTGATCTATGTATTGTGACGCTTCAAACGCAAATGGCTTTTACGTGATGGGAGTGTTAAAAATACAGTATAA AACCATTAATGTGTGATCTTGTAACAACACAAGCTTCTGGGGTAGTTGGTTTCTGGCATGATTATGTTCTATTTTTTTAG AAGGATGCCTTATCCTCCCCCTCTTTAATTTTTTAATTTTTGGCTTAACTAAATGAAGAAAGAGGCGTGCTTTTGTATAT TCTAGAATCTCGATATGACTGGTTACCAAGCTTGAATAAACTCTTATTTGGAATTTAGTGTTTCTCGAATCTGGAATAGG AGAGGGGGTATATGATGCTTGACGGTGTTTTGTCCACTTGTTATTTCCAGGGTTCGAATGCCATCTCCAGCGCTGATCTT TTTGGTGACTCTGGCGATAACTCCATTGATCTTTCTGCTAGCGACCTCATCAATCGATTATCTTTCCAGGTATTCCTTTA AACAACGAAATGATAATGAACTCCTTGTATTAGTTCCTGTATTCATGTTGGAGGGGATGCTGTGGCTTCTTCCCTCCCTT GCTTGTTTTGCAGGCACAACAGGATATCTCTTCCCTTAAGAACATTGCAGGAGAGACTGGGAAGAAGCTCAGCTCATTGG CCTCTACCTTGATGACTGATTTTGGAGACCGAATCCTCTGA
CDS sequence (LotjaGi4g1v0171200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGTCTGAAGGCTTCACCGACAAGAATGTTGTGTTCAAGAAACTCAAGACGAAGTCTGAAAATAAGATGTGTTTCGA TTGCAATGCGAAGAACTCAACCTGGGCGTCCGTCACTTATGGGATCTTCCTCTGCATCGATTGCTCCGCGGTTCATCGTG GTCTCGGCGTTCACATCAGCTTCGTGAGATCTACAAATTTAGACTCATGGAGTCCTGAGCAATTGAAAACAATGAGCTTT GGAGGAAACGGTCGTGCGCAGGTTTTCTTTAAGCAACATGGTTGGACTGACGGTGGCAAAATAGAAGCGAAGTATACATC CAGAGCTGCAGAATTGTATAGGCAAATTCTTTCAAAGGAAGTAGCTAAAAGTATGGCTGAGGAGGCAAGCTTGCTTTCAT CGCCTGTTGCTTCTCAGTCTGCCCAAGGGGTTAATGGACTTGCTGATGTTAAGACCAATGAATCACCGAAAGAAAACACT TTGGAGAAGCCAGAAAAGCCTGAGAGTACTTCTTCACCTAGAGCACACACAGCGGTATCAAATACTATGAAGAAGCCTAT TGGGGCTAAAAAAGCTGGGAAGAGTGGGGGGCTTGGTGCCCGTAAGCTCACTAAAAAGCCAAGTGAGTCTCTCTATGAGC AGAAACCTGAAGAACCACCTGCTCCGATCCCATCCACCACAAACAACAATTTATCTGCTGTGCCATCTCTGACGTCTCGA TTTGAGTATGTTGAAAATGTCCAGTCATCCGAGTTGAATTCTGGAGGTTCAAATGCAATAAGTCATGTTTCTGCACCAAA GGTATCAAGCTTCTTTTCAGACTTTGGAATGGATAGTGGCTTTCAGAAGAAATCTGGGCCAAGCTCTTCAAAAGTGCAAG AATCTGATGAAGCAAGAAAAAAGTTCTCAAATGCTAAATCTATTTCGTCATCCCAATTTTTTGGAGATCAGAGCAAGGCA GATGTTGAAGCTAAAGCTACTTTATCGAAGTTTTCTGGTTCGAATGCCATCTCCAGCGCTGATCTTTTTGGTGACTCTGG CGATAACTCCATTGATCTTTCTGCTAGCGACCTCATCAATCGATTATCTTTCCAGGCACAACAGGATATCTCTTCCCTTA AGAACATTGCAGGAGAGACTGGGAAGAAGCTCAGCTCATTGGCCTCTACCTTGATGACTGATTTTGGAGACCGAATCCTC TGA
Protein sequence (LotjaGi4g1v0171200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASEGFTDKNVVFKKLKTKSENKMCFDCNAKNSTWASVTYGIFLCIDCSAVHRGLGVHISFVRSTNLDSWSPEQLKTMSF GGNGRAQVFFKQHGWTDGGKIEAKYTSRAAELYRQILSKEVAKSMAEEASLLSSPVASQSAQGVNGLADVKTNESPKENT LEKPEKPESTSSPRAHTAVSNTMKKPIGAKKAGKSGGLGARKLTKKPSESLYEQKPEEPPAPIPSTTNNNLSAVPSLTSR FEYVENVQSSELNSGGSNAISHVSAPKVSSFFSDFGMDSGFQKKSGPSSSKVQESDEARKKFSNAKSISSSQFFGDQSKA DVEAKATLSKFSGSNAISSADLFGDSGDNSIDLSASDLINRLSFQAQQDISSLKNIAGETGKKLSSLASTLMTDFGDRIL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 2 | 142 | 141 | 2.6E-51 | ||
| PANTHER | 2 | 400 | 399 | 9.4E-216 | – | |
| PANTHER | 2 | 400 | 399 | 9.4E-216 | – | |
| CDD | 8 | 123 | 116 | 1.54452E-78 | – | |
| SMART | 10 | 126 | 117 | 2.9E-43 | ||
| ProSiteProfiles | 10 | 128 | 119 | 24.997 | ||
| SUPERFAMILY | 12 | 125 | 114 | 1.26E-36 | ||
| Pfam | 12 | 100 | 89 | 6.6E-33 | ||
| PRINTS | 22 | 41 | 20 | 1.5E-22 | ||
| PRINTS | 41 | 58 | 18 | 1.5E-22 | ||
| PRINTS | 62 | 83 | 22 | 1.5E-22 | ||
| MobiDBLite | 133 | 234 | 102 | - | – | |
| MobiDBLite | 133 | 154 | 22 | - | – | |
| MobiDBLite | 155 | 170 | 16 | - | – | |
| MobiDBLite | 281 | 317 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi4g1v0171200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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