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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0238200 |
| Transcript ID | LotjaGi4g1v0238200.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calmodulin-binding protein; TAIR: AT5G62570.1 Calmodulin binding protein-like protein; Swiss-Prot: sp|C0SVV6|CB60A_ARATH Calmodulin-binding protein 60 A; TrEMBL-Plants: tr|K7MKS1|K7MKS1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0238200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:55419990..55425017) extracted from Lotus japonicus Gifu genome v1.2.
GTAGCTTCTTCATTCACACTGACAAGAGTGAGCTCAACCACCAAACATCAATTACTTCACTTTAACTTAAGCTTACCATC TCAATTCTACCAAATTCAATTTTATCAGAATTGCTTCTGATAATCAAAGAGGGCGTGTTTGTTGCGTGTGCGGGTGGCCC CAGCAGTTTTACCAAGTCATAGGTAGAAGTATAACGCGTTTCTGCACGGCCCCACTACTCCCTGTCCCAGAGCCTAAGGC TGAGGTGTTCCCTTCTCATCTTCCTCACTTTCATAATTCATTCCTCTCCCCTCCTCCAACTCCAACTCCAACTCCAACTC CAACTCCAACAACAATCAAAGGTCATGGTGGCGCTTCTTCATCTCCCGTGTCGTTTCCACAATTGTCTGAATCCAAATCA AAAGGTAGTAGTAGCAGTAGACGACGAGAGAGGTTGAAGGAAGCAAGAAGCATCCCACACCGAACAAACTCAAAACATGA CAACATGAGTGAAGCAAAAAAAGTAGAAACAACACAAACATAGAAAGAAAGAAAGAACCCTATTTATTAAATTGGTTTTT GGAGTTTTACACAGTGGTGGTTGGGCACTTGGGCTTGTTGTCGTTTACCCGTTACTTCCTCTTTTTGGCGTCACAATACG CAGACAGATACACACACCGTATAAATATGCTGTTATTGTTCTGCTGTTTTTGTTCCTATCTTCCGAAGCCGCATGCTGAT TGCTGATATGCCCATCACCGCCGCATAGCCTCTTTCTTTTTGCTTCTGGTTCTTCGGTCATGTCGCTCAAAAGGGGTGCC GATGATGGCAAGAGTTCCGATGATAAGCGTAGAAAACCTCCACCTTTCTCCAGGTATTGTAATGGGGTTGTTTCATTTTT TTCTGCTTTTGTTGTGTTGGCTGTGTGATGAGGAAATGGGAGTGGAATGGGGGGGAGGGGGTGAGAAGAGTTTTTTGAAT GAATGGGATTGCCAAGCAATGTGCTTTGTTTTTGTTGTGAATGATGATAGTTTGATCCAGGTGCTGAAATGCACGATGCC ATGATTTTTCATTGGTACTAGTGAATTGGCTGTTGTTTCATATGAAAAAGGACCAATGCCATTGTGTATTGATTGAATGT CGTTCTCTTTATGCAGTATATTTGATTAGCAGACTATTGGGTTTTTTTTTTGTTGACATTTAATTTTGGTTATGGTGAAT GATGTTTAGTGTGGTGCGGGAGGTGATGAAGTTACAATCAGTCAGGAATGTGCTGGAGCCAATTCTTGAGCCCTTGGTTC GGAGAGTGGTATGTATGAATTTCCTAGTCGCTCAATTCACTTTCATTACATTTATATTTCTGGGGTTCAATTCTTTTTCT TTGTTTATGTTGTTTCATGGAGATTGGTAATGCTTGCTTTTTGGTTTTCTTGATGGTTTATGGACCTAATTCTTGCGTCT CAGGATAAGTGGATGCATGTAATTAGACAAATGCAGTGTTGTTGTGGGTTTGCATGCTGCAGATTGCTTTTCTGTTGATC TGTTGAGTACTTGCATCCAATTTATGGTGGCTATGGTTTTGGTCTGATACTTGGCATTCTTCCACCTTGTGGACTAGTGC AGAGGGCTTTTCTAACTAATATTTTGCCCATATGATGCATCTCCTTGTTTGTCCTTCCTCGTCCTGTCACATACTACTTC TGTGACTGGACTTGGAGCATGTCATGTCATAGAAGACTCGCAAACAAAGGAGACACATACAAATTCTACTTCATTACTTA TTTTGAACACCTTGCGGTGACTGGCTTCAATTATTTGATGCACTGGAACAAGTCTGGAAATGTATAATTAGATAAAAAGC GGTCTACTCTCCTTGTGATATTGTGAGATAAATGGACTAACTAGATGAAGTTACGTTCATATTGTGCTATGGGTGTTTAA TAGGTTTAGAAGTGATTGGATGTGATTTTTGAATTAATACTGTATGATAGTTCTTTTAGTGGGTTAGCAGGTTTTTATTT TGGTCCAGTAAATGTTAGTACCACTTTTCGGATAGTTAATATGAGACACCAATCATTTATGTGACATCTTTGCAGGTTAG GGAGGAAGTTGAGTTGGCTCTTAAGAAGCATTTATCCAGCATGAAACAGTAAGATATAATCTTCTGCTGATAATTTTAAT TCCCATGGCTTAAATGTGGGGGTGCTTATGAAAAAAACTGGAGTGGATTAGGAAAAAATGCTTTAGCTGAAGGGTTTGAA ATTGCTTTGCTTGAATCAAGTTTCTCAATGCATCTTTTTTTTTTTTTTTTTTTTTCTCACTTTTCAGGGCCTATGGAAAG GAAATGAATATTACTGAATCAAGAACTTTGCAGCTACAGTTTGAAAACGGCATTTGTCTTCCAGTATTCACTGGAGCTCG AATCGAAGGAGAGGATGGCTCCAATTTAAGGATAAGTTTAGTTGATGCCGTAACAGGGAAGGTTGTGAGTACAGGACCTG AATCTTCAGCTAAGGTCGAAATTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAGGTGGTATTTGGATGCCTGAAGAGTTC AAGAGCAATATTGTGAAAGAAAGGGAAGGAAAAAAGGCCCTCCTTACAGGAGATGTAATTTTTTATCTAAAAGATGGGGT TGGTGTGGTGGGTGAAATTTCATATACAGATAATTCAAGCTGGACAAGAAGTCGTAGGTTCAGGCTTGGGGCAAGAGTTG TGGACTACTTTGATGGTATTAGAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACAGAGGAGAATGTGAG TATTTGTCTATAAATACATAAAACCCTTTTTCTGCTTATATGCATGGAGATCTAATGTTTGCAGATGCTATTATAAATGA GTTTTTTAAGACTAAACCTTAGATGTCAGACAGGGAGTTTAGAACATGAAAGACTAAGAAGCAAAGAACAGTATAAAACA AATGTGATTCACATGAAAGTGACAGGGTTTTCTTGATTAGTATCTTTTTTTTGTGGAAATTATATTTACAAAAACCTGTA TAAATATACTATATTACTGTTTACTGGTCCTTAACTTTTATGATCTCATCGTATCCATATGTGATTTTCTTGTTGGTGCA AATGAATGAATTATTTATCTTTTGATGTGTACTTTTGGGATTGCCTTTTTTTTGGAAAAAGTACTCAAAACTTGTGACAT TTAATTACAGTAAATAATAAGAACATATTTGAGCTTTTCCAAGTCGTTTGTTAAAACGAGAGCGGCACTAGACGTAGTTT AACATTTAATTTTTGGCTGCAGTGTACAAGAAGCACCACCCTCCAAGTTTGTCTGATGAAGTTTGGAGACTGGAAAAGAT AGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCTATACTGTTAAAGATTTTCTCACACTTCTCAATC TGGATCCAGCAAAGCTGCGCAGTGTAATTATTAATTAAATCGTATTTGAATATCTCTATATTTATATTTGCAGCTACTAG TCAATAGACCTGTCATTTTGTCTCATTTACTTCCAAATGGTTTTTGATAGATTCTGTCTTTTGAAAAGAATTTTTAGGAA AAACTTTCAGGGGAAAGTTTAGTTGTTTACTAGTTGTATCAAACCATTTAGATTAGCTTTGCCAATATCAAGTTTAACAC CTCCAAGATAATGAACTTACACATCGATGAGCATTCTGTATCACTCTTTTGGTTAACCAAAGTTTTGAATGCTAAGCATT CTGTGTCATTTCTGGAAATAGTGAACCACTGCTTGGTTTCTATCTGGGGCAAATGAATAAATTCTTTGCTTGGGAATATG CAGATACTTGGCACTGGGATGTCTGCAAAGATGTGGGAAGTGACTCTGGAACATGCTCGAACTTGTGTACTTGATATGAC GAGGAACCTGTACTTCCCTGCTCATTCACAACAAACCGGTGTTGTCTTCAATGCAGTGGGACAAGTGACAGGACTGATCT CTGAAGGCGAGTATGCCGATGTAGATAAGCTGTCCGAAACTGAAAAGGCAATTATCCTCTGATCACCTATTACTTCTTTA CTCTCCTTCATTTCTCATTTCTCCTTATAACTTACCAATTTGATTTTCCACCATCAGGCTGATGCTCAAAACTCAGTTAT TTCTGCACTTAACCAAGGGGATTTTGCCTCTTTTGAAGATGAAGCCTCCCTCATCGATCGGTCTTCGCACTTAACTAATG CACTTTACTCCCCAAGCTCTCCCAGGACCGAGGGATCAAGTGCAAACAAACTTTTGGGTCCTCAAAAGCCTGGAGGGTTC GATTACACCCCAGCAAGTGCCTCTTCTCCAGATATCATGTCGTCCATTTATTCCGTTGCTGGAACTAGTGGCTTGGATGA CTATGGCTTGTCTAGTTTTGACAGCATGAGCCTTAGATATGATCAAGCTCTTGGTTTTCCAGTCTCCAACTCTTTGATCT GTGACACAGATTCAATGGCCCATGTTTTTAGTGATGAAGATCATTTGCAGTTTTTCGATACTGATCTCCAATCACAGTTC CACATCCAAGCAGATTTACAGAGTGCTGTTGATAGCTTCATGGTGGCACGCACTACGACCGTGGCCAATGGTAAAGCTCA GAGGAGATGGCGAAAGCTGTTCAACGTTCTGAAATGGTTCATGGTGAGGAAACGACCAAACCAGAGATACAGGTAACTAG TTGTGAAGAACATGAAGGTCCAGTTAAGCTTGTAGATTGTGTTCATGAGTGCAGCCCAAAAGAATGTTTCTTTCAGTTGA ATGAGAAAAGTTGTGGTTTCTTTTATATGTAAATACATCTTTTGTGCATTGGCTCTTATTAGCCAGAGATCTTAGAGTTG CTAGTCTCTTTTGCTGTCTAAAATTAAGTTGTAAATACTTGTCTTTCACAGTTAGGAGAGGATTTCTGGTTGATGGCAGA TGCTTCATATTTTTGTAAGCATGGTTGGTCCAATAAAATCAATTCCCCCCTTGTGAATTTTGGTTCCC
CDS sequence (LotjaGi4g1v0238200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGCTCAAAAGGGGTGCCGATGATGGCAAGAGTTCCGATGATAAGCGTAGAAAACCTCCACCTTTCTCCAGTGTGGT GCGGGAGGTGATGAAGTTACAATCAGTCAGGAATGTGCTGGAGCCAATTCTTGAGCCCTTGGTTCGGAGAGTGGTTAGGG AGGAAGTTGAGTTGGCTCTTAAGAAGCATTTATCCAGCATGAAACAGGCCTATGGAAAGGAAATGAATATTACTGAATCA AGAACTTTGCAGCTACAGTTTGAAAACGGCATTTGTCTTCCAGTATTCACTGGAGCTCGAATCGAAGGAGAGGATGGCTC CAATTTAAGGATAAGTTTAGTTGATGCCGTAACAGGGAAGGTTGTGAGTACAGGACCTGAATCTTCAGCTAAGGTCGAAA TTGTAGTCCTTGAGGGTGATTTTGAAGAAGAAGGTGGTATTTGGATGCCTGAAGAGTTCAAGAGCAATATTGTGAAAGAA AGGGAAGGAAAAAAGGCCCTCCTTACAGGAGATGTAATTTTTTATCTAAAAGATGGGGTTGGTGTGGTGGGTGAAATTTC ATATACAGATAATTCAAGCTGGACAAGAAGTCGTAGGTTCAGGCTTGGGGCAAGAGTTGTGGACTACTTTGATGGTATTA GAATAAGAGAAGCAAAGACAGAGTCATTTATTGTCAGGGATCACAGAGGAGAATTGTACAAGAAGCACCACCCTCCAAGT TTGTCTGATGAAGTTTGGAGACTGGAAAAGATAGGCAAGGATGGAGCTTTCCACAAGCGTTTGAGTCGGGAAAAGATCTA TACTGTTAAAGATTTTCTCACACTTCTCAATCTGGATCCAGCAAAGCTGCGCAGTATACTTGGCACTGGGATGTCTGCAA AGATGTGGGAAGTGACTCTGGAACATGCTCGAACTTGTGTACTTGATATGACGAGGAACCTGTACTTCCCTGCTCATTCA CAACAAACCGGTGTTGTCTTCAATGCAGTGGGACAAGTGACAGGACTGATCTCTGAAGGCGAGTATGCCGATGTAGATAA GCTGTCCGAAACTGAAAAGGCTGATGCTCAAAACTCAGTTATTTCTGCACTTAACCAAGGGGATTTTGCCTCTTTTGAAG ATGAAGCCTCCCTCATCGATCGGTCTTCGCACTTAACTAATGCACTTTACTCCCCAAGCTCTCCCAGGACCGAGGGATCA AGTGCAAACAAACTTTTGGGTCCTCAAAAGCCTGGAGGGTTCGATTACACCCCAGCAAGTGCCTCTTCTCCAGATATCAT GTCGTCCATTTATTCCGTTGCTGGAACTAGTGGCTTGGATGACTATGGCTTGTCTAGTTTTGACAGCATGAGCCTTAGAT ATGATCAAGCTCTTGGTTTTCCAGTCTCCAACTCTTTGATCTGTGACACAGATTCAATGGCCCATGTTTTTAGTGATGAA GATCATTTGCAGTTTTTCGATACTGATCTCCAATCACAGTTCCACATCCAAGCAGATTTACAGAGTGCTGTTGATAGCTT CATGGTGGCACGCACTACGACCGTGGCCAATGGTAAAGCTCAGAGGAGATGGCGAAAGCTGTTCAACGTTCTGAAATGGT TCATGGTGAGGAAACGACCAAACCAGAGATACAGGTAA
Protein sequence (LotjaGi4g1v0238200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSLKRGADDGKSSDDKRRKPPPFSSVVREVMKLQSVRNVLEPILEPLVRRVVREEVELALKKHLSSMKQAYGKEMNITES RTLQLQFENGICLPVFTGARIEGEDGSNLRISLVDAVTGKVVSTGPESSAKVEIVVLEGDFEEEGGIWMPEEFKSNIVKE REGKKALLTGDVIFYLKDGVGVVGEISYTDNSSWTRSRRFRLGARVVDYFDGIRIREAKTESFIVRDHRGELYKKHHPPS LSDEVWRLEKIGKDGAFHKRLSREKIYTVKDFLTLLNLDPAKLRSILGTGMSAKMWEVTLEHARTCVLDMTRNLYFPAHS QQTGVVFNAVGQVTGLISEGEYADVDKLSETEKADAQNSVISALNQGDFASFEDEASLIDRSSHLTNALYSPSSPRTEGS SANKLLGPQKPGGFDYTPASASSPDIMSSIYSVAGTSGLDDYGLSSFDSMSLRYDQALGFPVSNSLICDTDSMAHVFSDE DHLQFFDTDLQSQFHIQADLQSAVDSFMVARTTTVANGKAQRRWRKLFNVLKWFMVRKRPNQRYR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| MobiDBLite | 1 | 23 | 23 | - | – | |
| PANTHER | 8 | 542 | 535 | 3.4E-168 | – | |
| PANTHER | 8 | 542 | 535 | 3.4E-168 | ||
| Pfam | 83 | 366 | 284 | 4.4E-117 | ||
| MobiDBLite | 389 | 404 | 16 | - | – | |
| MobiDBLite | 389 | 420 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Calmodulin binding | Interacting selectively and non-covalently with calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states. |
Expression pattern of LotjaGi4g1v0238200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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