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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0279600 |
Transcript ID | LotjaGi4g1v0279600.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pyrophosphate-energized vacuolar membrane proton pump; TAIR: AT1G15690.1 Inorganic H pyrophosphatase family protein; Swiss-Prot: sp|P21616|AVP_VIGRR Pyrophosphate-energized vacuolar membrane proton pump; TrEMBL-Plants: tr|D3THK8|D3THK8_LOTCO Tonoplast proton pump; Found in the gene: LotjaGi4g1v0279600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:65056985..65057346) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGATTTTTGCTTGCAGCCAATGGCCTTTTGGTTCTTTACATTACCATCAACCTATTCCAGATTTACTACGGTGAGGA CTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGACGAGTTGCTGGAG GTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGCAAGGTAGAAAGAAACATTCCTGAGGATGACCCCAGA AATCCAGCTGTAAGAAATTGCATCCTGAAACTAGTTCCGTTATTTGGTTTCTGAACTTTTTTTTTGCTAATACTCAGCTC ATGTCTGAATATATCTCTGTGTACTCAGGTGATTGCTGATAA
CDS sequence (LotjaGi4g1v0279600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGATTTTTGCTTGCAGCCAATGGCCTTTTGGTTCTTTACATTACCATCAACCTATTCCAGATTTACTACGGTGAGGA CTGGGGTGGTCTTTTTGAGGCCATCACTGGTTATGGTCTTGGTGGGTCTTCTATGGCTTTGTTTGGACGAGTTGCTGGAG GTATCTATACTAAGGCTGCTGATGTTGGTGCTGATCTTGTCGGCAAGGTAGAAAGAAACATTCCTGAGGATGACCCCAGA AATCCAGCTCTCATGTCTGAATATATCTCTGTGTACTCAGGTGATTGCTGA
Protein sequence (LotjaGi4g1v0279600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGFLLAANGLLVLYITINLFQIYYGEDWGGLFEAITGYGLGGSSMALFGRVAGGIYTKAADVGADLVGKVERNIPEDDPR NPALMSEYISVYSGDC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 95 | 95 | 4.9E-52 | – | |
Pfam | 1 | 96 | 96 | 4.5E-33 | ||
PANTHER | 1 | 95 | 95 | 4.9E-52 | ||
TMHMM | 2 | 24 | 23 | - | – | |
TMHMM | 34 | 56 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Inorganic diphosphatase activity | Catalysis of the reaction: diphosphate + H(2)O = H(+) + 2 phosphate. | ||
Molecular function | Hydrogen-translocating pyrophosphatase activity | Catalysis of the hydrolysis of pyrophosphate, which generates a proton motive force. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Biological process | Proton transmembrane transport | The directed movement of a proton across a membrane. |
Expression pattern of LotjaGi4g1v0279600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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