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LotjaGi4g1v0298300.3

Overview

Field Value
Gene ID LotjaGi4g1v0298300
Transcript ID LotjaGi4g1v0298300.3
Related isoforms 7
Lotus japonicus genome version Gifu v1.2
Description Glycerol kinase; TAIR: AT4G30310.2 FGGY family of carbohydrate kinase; Swiss-Prot: sp|A2AJL3|FGGY_MOUSE FGGY carbohydrate kinase domain-containing protein; TrEMBL-Plants: tr|A0A151SRN4|A0A151SRN4_CAJCA FGGY carbohydrate kinase domain-containing protein; Found in the gene: LotjaGi4g1v0298300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:67231659..67235204) extracted from Lotus japonicus Gifu genome v1.2.

AAAGGCAAGATGTTTAGTACTAAAATTATACATTATTTTGAAGTTTCAACTGTTACTGGCTTGAGGTTTATTGACAAAAC AAACTTGTATTGCTTAGTTGGAAGACTAAGCACAACCTTTCTCCTTCTATGCTGATTGGTTCACTTTCAAGTGACAAACT CCTATGAAGTGCCTGGTTTCAATATTTCTAAACTCTTAACAGATTGAAATTTTCAGGAACTGGGTCTTGTGCCAGGAATT CCTGTAGGGACATCACTAATTGATGCACATGCTGGTGGTGTGGGGGTAATTGAAAGTGTGCCATCATCAGAAGCTGAAGG TTGTCATAATTTCCTTATACTTGTGATTGTAAGTCATTCAAATGAAGCAGTAGCGTTTCTTAACTTGAAAAACTTATGGA TCCTCAGAGCATGACGAGGAAGCAATTTGCAACCGTATGGTGTTAGTTTGTGGAACTTCTACATGCCATATGGCTGTATC CCGGAGCAAATTGTTCATTCCTGGGGTTTGGGGGCCATTTTGGTCAGGTACTGTACTTTTTCCATTTTATGAACTAAATC TCAACTCTAGATGACATCGTACCTTTCTCTTGGAAGACATTTGAAATAGCTGTGGTCCGTGGATTATGTATTGGGGTGGC TACCATGACCATTCACGCAGTTTAAATGCTGTTAATACCATCATAATTCAAAACTGTAGTCTCAAGTGAGAAGTGGAACT ACCCTTTTCGATAATAATTCCAAGTTGCTTAGTTGTGGTTGAAAATTCATGAATAAATTTTTCTTTGGTTGGAACTTGGA TCTGAAAAGGTGTTAATTTGGGATTGAATATTTGTCGCATTTTGATGTTAATATTTTATGGTTTTGTGACTGTATTCTCA TTAATATCATTCACTCATGTGTCTTTGTAAAAATATTTGCGTGACTACTTATGATTAGTTCCAGTTTCTGGAATATTAAT ATTGGCATAAAGTAGAAGGTAACTTAAATCAGAGTTTACGTTTGACAGGTCCACCTGAAGGATAACCTGTGTAATTTTCT CTATCTTCTACTTTATATAAGGTGAAATGATGTTGTTTTCATCATTGCTTCTCTTGCATCCGCTATGTTGTGATGCGTTT CTTCTTTATCTGGACTTTCAGCAATGGTACCAGAATATTGGCTAACTGAAGGTGGACAGAGTGCTACTGGTGCATTATTG GATCATATAATTGAAAACCATGCTGCTTCTCCACGGGTTGCAAATCGAGCTGCCTCCCAAAGTAAGGTTTTTCCTCTTCT TCTGGAATATACAAAAAAATTATCATTTATACAAGTCTGTTTTTTATGAATGTTTTAACGAGGCTAATTTTCTATAGTTC ATTATATCAGAGATTTCAGTGTTTGAACTACTGAACAAGCTCTTGGAAACAATGATGATTGAGCAGAACCGATCCTTTGT AGCCGCCTTGACTGAAGATTTACATGTTCTTCCTGACTTCCATGGGAACAGGTATTTGGGGACCAACATCATCTTTCCTC TGTTATATGCAATGACAGTGTCCGAATAATGGGCTGTTATATATGATGGCCCAGGTCTCCCATTGCAGACCCAAAATCGA AGGGAGTTATGTATGGTTTGACACTTGATGCAAGTGATGAACAGTTGGCTCTTCTATATCTGGCGACTTTGCAGGGCATT GCATATGGCACACGTCACATTGTAGAGCATTGCAACGCACATGGTCACAAAGTAAGGATGCACAATACTATAACACATAT CTGAGATTATTACCAGTTCTTTAATTTGGCTTTTTAAACGTCCATCTCACGTTTTCACCCGGACCCCCTGACAGTCTGAC AATCACCTTGGTATAAAATTGTTTTCCCAGCATCACTCACCCTTTAAGGTCAAGACACGCTTATTAGAAACCCCTCCCCA GGAAGGTACAATTCCCGGATTTTTGGATACTTCTCAAAGCAATAAGGGGAAAAACAAGAAAAACACAACAGAAAGGTAGA ATATAGCTGCTGCTAACACTTAAATATGTCCTCAGCTTTCTTCTGAACTAGTGAATACGCATTCACACACACTCTCCTCT ACTTCACCTCCCCTAAATAGTTATTCTCATTCCATTATGCCAGCTGAATGTCCACTTAGTAACTAACTTCAAGTCTTCAA CTAGGCCCTACACTACCACCTCGACCACTTTTGGGGCCTTTTTGTTTACCTTGCAAGCTTTTAGTCCATGAGAGGATTAT TGTACTGTTCTCGTCTAGGATCATCTCTCATATTCTGGTTACTAACATCATGTTAGGATACTTACTACTTGTAGGTAAAT TTTTTCTGTATATTTGTTGTATGGTCCTGTTTGTGAATACTGAATTCATTACTCTTGGCTGTTGATGGAGTTGCTGGCTT TATTATCAATTTATCATGATTGTTCTTCCTTTGCCTGCAGATCAACACACTACTTGCATGTGGTGGCCTATCAAAGAACC CTATCTTCATGCAGGAACATGCTGATATTATTGGTATGTGTTGAAGAGGGTCTGGGACCATGTATGCATGCACACTGATA TTCATGTGTTACATATTCTTTGTGAACCTTTTTCAGAATAAAGAATGGTATGGAGTATGCTCCAGTTCTAACACACTAAC AAAATTATGCTAGTATCTCACAGTCACAGTCCAGTCCAGTTTGGGTTGATGCCTGATGGTCAACCTAGAAAAATAAATCA TACTTGATTCTTTGTGTGTTTTACAAATCATTCCACAGTTCAAGGTTTGGTTTGTTTCCAAACCATGTCAAGTCAACAGA AACAAAAAGCTAAAATGCCAGAATTGCAATAGCACTAGCATATAAGTCAGTTTAAAATTCTTATCTTGCCCAATTTTGTT CAGATTTTAAATACCCCTGCTAGTATCTCTGCCATTAGCACAGGAATTTGCAAGTTTATGGACCGCTTTGAAGTATAGGT GGAAATTGTTCCATGATCTGGATTCTGTCTTACTTTAATTTGCTTTAATTCATCAATGAAAATGACTGGCTGCGCATTGG AATGATAAGGAATGACACTGATGATCATGGAGACTTTATTTTCTTTTTATTTAAATAATGAATTGCTTTTACAATTTTCT CAGGTTGCCCTATAATTCTTCCAAGGGAAAGTGAATCTGTGCTCTTGGGTGCTGCTATTCTGGGTGCTGTTGCTACAAGG AAATATCATAGCCTTAGGGAGGCCATGAAAGCCCTGAATGCACCTGGTCAGGTGCGGCCACCTTTCTTTCTCTCTTGATA TAGTAAAGATAATTGCATGTGGTACATCACCAGATTTTCCACTCTACTGCCTCTCTCACAAGCCAAGTTTTTCAGTTAAT AAATTAAAACTCTGCTACTCCTAGTTTTCCCTGAAGGCTAATGAATTTCATGGATTTCGGCAGGTCATTCATCCGTCTAA CGATCCAAAGGTCAAAAAGTACCATGATGCCAAATACAAGATCTTCCGGGGCCTTTATGAACAGCAACTCTCCCATCGAT CTACGATGGCCCAAGCTTTGGCATAG
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0298300.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTGTTAGTTTGTGGAACTTCTACATGCCATATGGCTGTATCCCGGAGCAAATTGTTCATTCCTGGGGTTTGGGGGCC ATTTTGGTCAGCAATGGTACCAGAATATTGGCTAACTGAAGGTGGACAGAGTGCTACTGGTGCATTATTGGATCATATAA TTGAAAACCATGCTGCTTCTCCACGGGTTGCAAATCGAGCTGCCTCCCAAAAGATTTCAGTGTTTGAACTACTGAACAAG CTCTTGGAAACAATGATGATTGAGCAGAACCGATCCTTTGTAGCCGCCTTGACTGAAGATTTACATGTTCTTCCTGACTT CCATGGGAACAGGTCTCCCATTGCAGACCCAAAATCGAAGGGAGTTATGTATGGTTTGACACTTGATGCAAGTGATGAAC AGTTGGCTCTTCTATATCTGGCGACTTTGCAGGGCATTGCATATGGCACACGTCACATTGTAGAGCATTGCAACGCACAT GGTCACAAAATCAACACACTACTTGCATGTGGTGGCCTATCAAAGAACCCTATCTTCATGCAGGAACATGCTGATATTAT TGGTTGCCCTATAATTCTTCCAAGGGAAAGTGAATCTGTGCTCTTGGGTGCTGCTATTCTGGGTGCTGTTGCTACAAGGA AATATCATAGCCTTAGGGAGGCCATGAAAGCCCTGAATGCACCTGGTCAGGTCATTCATCCGTCTAACGATCCAAAGGTC AAAAAGTACCATGATGCCAAATACAAGATCTTCCGGGGCCTTTATGAACAGCAACTCTCCCATCGATCTACGATGGCCCA AGCTTTGGCATAG
Download CDS Sequence

Protein sequence (LotjaGi4g1v0298300.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVLVCGTSTCHMAVSRSKLFIPGVWGPFWSAMVPEYWLTEGGQSATGALLDHIIENHAASPRVANRAASQKISVFELLNK LLETMMIEQNRSFVAALTEDLHVLPDFHGNRSPIADPKSKGVMYGLTLDASDEQLALLYLATLQGIAYGTRHIVEHCNAH GHKINTLLACGGLSKNPIFMQEHADIIGCPIILPRESESVLLGAAILGAVATRKYHSLREAMKALNAPGQVIHPSNDPKV KKYHDAKYKIFRGLYEQQLSHRSTMAQALA
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43435
1 269 269 5.7E-148 –
PANTHER
PTHR43435:SF6
1 269 269 5.7E-148 –
Gene3D
G3DSA:3.30.420.40
1 268 268 1.9E-85 –
Pfam
PF02782
2 211 210 1.2E-50
IPR018485
SUPERFAMILY
SSF53067
2 258 257 8.24E-59
IPR043129

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005975
Biological process Carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Subterm of
GO:0016773
Molecular function Phosphotransferase activity, alcohol group as acceptor Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to an alcohol group (acceptor).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0298300.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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