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LotjaGi4g1v0351500.1

Overview

Field Value
Gene ID LotjaGi4g1v0351500
Transcript ID LotjaGi4g1v0351500.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Cytochrome P450 family protein, putative; TAIR: AT3G06150.1 cytochrome P450 family protein; Swiss-Prot: sp|Q96HM7|PED1B_HUMAN PC-esterase domain-containing protein 1B; TrEMBL-Plants: tr|K7L3U9|K7L3U9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0351500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:73034996..73037791) extracted from Lotus japonicus Gifu genome v1.2.

ATGAAATAAAGAAACTATATTTTTCTTCATATATTTTCATGCTAAAAAGAGCTTCCATTCCAGAAGACTTTACTGAAACC ACATCCACACACTCTACTGGGGTTGGAGTTTTTAACTTTTCAACGGTAATAACAATGGAATGCTGTGAGTAAGAAAAGCA TATGCATAACACAACCTTGTTTCCAATCTAGACTAGAAACAGTGAAAAAGAACAACCTTCACAACTTCTTTTTGGACTTC AACTTCTCAAATCTACACAACTTGCTGTCCTTGCAACTTTACCATCCTTCTTCTTCTTTCATCTTCATCTTTGAAGAACT ATCAGTCACTCACATTACATTGAAAATCTGAAAGCCACATGTGAGTATTCCATTCAACTAGAACTAGTGTTTTATTTTTT CTTACTACTTTTCCTGTTTTCTCGAGAAAATTGACAATTGTTGTGCCTTTAAAGTGACTTTGGACTTTGAATGTAGTGTT TTTGTCGTTAAAAGATAGCAACTGTTGCGGTTTTGGGTGGAGGGTTTGTTTGTTGGTTGCTGTTCTTGTTTTGGAAGCTA GTTTGTGTGTTTGAGTGATGGCATTGAAGGTAAAGGTAGTGATTTCGCCACCACCAAATCAATGGCCTCTATGGTCCATT CCAGTACTTCATTGGCGTGTTGGGTTGCTCACTGCTTTGGTTTTGGTTGGAATGGTCCTGGTTTGGAGCATTGATGGCTG CACTGTTAAGACCTTCATTCAACTTTGGAGGTATCGTCAAGATTATCAAAATTCACCTTTTGTCTCTCCATATGATCCTG TTAGTTCAGATCAAAGCCAATCCAACACTGAAAAACTTGGCAAAAGCTCCATAAAATCTCTTCTAGTTAAGGGGCATTCT TCAAGTTGGGTTTCAAGTGAATTAGAGCCTAATTTGACTTCAAATCTTCTAGCTCGATGGTCGGCTCGTGGAGGCGAGCC TTGTAAAGATTCCAAGACGGTGGAGATTGCAATTCCTGGGTTGGATGGTGGTGGGAAATTGATGGAGTTATCAGCTGGAG ATGTTCATGAGTTTGGTTTTCAAGCATTGGATGAGTCAGGGAAGGTTCATTGTTCAGGTGGAGATTACTTTGAGACTGAT CTTTCAGGGGAATCATGGAAATCTAGGCCTCTGGTGAAGGATTTCAGCAACGGTTCTTACTCAATCTCGCTGCAAGTTCA TCCTGATTTTGATGGGGTTTACAATCTCACCATAATCCTGCTTTATAGACACTTTGAAGGCCTAAAATTCACACCATGGA GATTTGCCTATGACCGAGTTCTCCGTAATGTTACAATCAGATTCTACAAAAGCAGTGTTCAGATGATGCCAGGATTGCAG ACTTGCAAAGCTTCTGATTTTGCCAGGGATGTTTGGTGTGGAAGGTGGACAAGACATGGCAAGAATGATGACTGCAACAT TGGTAATGATGGTAGATACCGGTGCCTCGCGCCGGATTTTCCTTGCACAGCTCCTTGGTGTGATGGTTCCTTAGGAATTT TGGAGAGTAATGGTTGGGTGTACTCAAGTCACTGCTCTTTCAAGATGTATTCAGCTGATTCTGCTTGGAATTGCTTGAAG AATCGATGGATTTTCTTCTGGGGTGATTCAAATCATGTTGACACAATCCGTAACTTGCTCAATTTTGTGTTAGATTTGCC TGAAGTACATTCTGTCCCCAGAAGATTTGACATGAACTTTTCAAACCCAAGAGACTCATCTCAAAGTGTTAGGATCACTA GCATCTTCAATGGTCATTGGAATGAAACGCAAAACTATCTGGGGTTGGATTCTTTGAGAGATGAGGGGTTTCAAACTTTG TTGAAGAAATACTTCTCTGGGGAAACAATCCCAGACACTATGATCATGAACTCTGGCTTGCATGACGGTGTCCACTGGCG TAACATTAGAGCATTCTCTGTTGGAGCAGACTATGCAGCATCCTTTTGGGGTGATGTTATGAAGACAGTGAAGCAGAGAG GGTTGGCATGGCCAAGAGTGTTTTACAGGACTACTGTTGCAACTGGTGGATATGCTAGATCCTTAGCATTTAATCCTAAC AAGATGGAGGTTTTCAATGGTGTGTTCTTAGAGAAACTGAAGCAAGCAGGAGTTGTATCTGGGGTGATTGATAATTTTGA CATGACTTTTCCATGGCATTTTGATAATAGATGCAATGATGGAGTTCATTATGGAAGAGCTCCATTAAAGATGAAGTGGC GAGATGGTCAAATTGGGCATCAGTATTTTGTGGATCTCATGTTAGCTCATGTTCTTCTTAATGCACTTTGTGCCAGATAG TGGATCACGATCCTCTCATGTGAAAATTCCCTCGTGTTCCCTCCACCAAATAGTTATGCAGCCTCACTGATTTGGATTCA TTGCAGTCAAGGGAATCCCGCATCCACGCATTTCAAGCATTTTGAGCCGTCCGATCAAGATCGAATGCTCATATTCCGAG TAACTATATATCATACGGTTAAGATCAGACGGCTCAAGAAGAGTGTGTGAATGCGTAATTCCTCATACTGCAGGAAATCC AAATCCCAGCTTCAGTTAGAAGAGATTATTTGAACTTAACCTACAAGGCACCTTGTTAGCATTATTTCTTGGTCATGTAT TCTTGTTAGCGTGAGTTATGTATATAGTATGAGATTGTTCCACTTGTAGATTAGCAGAGGGTTTTAACTCCTCTAAACAT ATTGTACTGTTGATAATTAATATCATAGTTAAGAGGTTCTTTTGTTTGCATATCAGTTCTTGGTTCTAAGTATTAC 

CDS sequence (LotjaGi4g1v0351500.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCATTGAAGGTAAAGGTAGTGATTTCGCCACCACCAAATCAATGGCCTCTATGGTCCATTCCAGTACTTCATTGGCG TGTTGGGTTGCTCACTGCTTTGGTTTTGGTTGGAATGGTCCTGGTTTGGAGCATTGATGGCTGCACTGTTAAGACCTTCA TTCAACTTTGGAGGTATCGTCAAGATTATCAAAATTCACCTTTTGTCTCTCCATATGATCCTGTTAGTTCAGATCAAAGC CAATCCAACACTGAAAAACTTGGCAAAAGCTCCATAAAATCTCTTCTAGTTAAGGGGCATTCTTCAAGTTGGGTTTCAAG TGAATTAGAGCCTAATTTGACTTCAAATCTTCTAGCTCGATGGTCGGCTCGTGGAGGCGAGCCTTGTAAAGATTCCAAGA CGGTGGAGATTGCAATTCCTGGGTTGGATGGTGGTGGGAAATTGATGGAGTTATCAGCTGGAGATGTTCATGAGTTTGGT TTTCAAGCATTGGATGAGTCAGGGAAGGTTCATTGTTCAGGTGGAGATTACTTTGAGACTGATCTTTCAGGGGAATCATG GAAATCTAGGCCTCTGGTGAAGGATTTCAGCAACGGTTCTTACTCAATCTCGCTGCAAGTTCATCCTGATTTTGATGGGG TTTACAATCTCACCATAATCCTGCTTTATAGACACTTTGAAGGCCTAAAATTCACACCATGGAGATTTGCCTATGACCGA GTTCTCCGTAATGTTACAATCAGATTCTACAAAAGCAGTGTTCAGATGATGCCAGGATTGCAGACTTGCAAAGCTTCTGA TTTTGCCAGGGATGTTTGGTGTGGAAGGTGGACAAGACATGGCAAGAATGATGACTGCAACATTGGTAATGATGGTAGAT ACCGGTGCCTCGCGCCGGATTTTCCTTGCACAGCTCCTTGGTGTGATGGTTCCTTAGGAATTTTGGAGAGTAATGGTTGG GTGTACTCAAGTCACTGCTCTTTCAAGATGTATTCAGCTGATTCTGCTTGGAATTGCTTGAAGAATCGATGGATTTTCTT CTGGGGTGATTCAAATCATGTTGACACAATCCGTAACTTGCTCAATTTTGTGTTAGATTTGCCTGAAGTACATTCTGTCC CCAGAAGATTTGACATGAACTTTTCAAACCCAAGAGACTCATCTCAAAGTGTTAGGATCACTAGCATCTTCAATGGTCAT TGGAATGAAACGCAAAACTATCTGGGGTTGGATTCTTTGAGAGATGAGGGGTTTCAAACTTTGTTGAAGAAATACTTCTC TGGGGAAACAATCCCAGACACTATGATCATGAACTCTGGCTTGCATGACGGTGTCCACTGGCGTAACATTAGAGCATTCT CTGTTGGAGCAGACTATGCAGCATCCTTTTGGGGTGATGTTATGAAGACAGTGAAGCAGAGAGGGTTGGCATGGCCAAGA GTGTTTTACAGGACTACTGTTGCAACTGGTGGATATGCTAGATCCTTAGCATTTAATCCTAACAAGATGGAGGTTTTCAA TGGTGTGTTCTTAGAGAAACTGAAGCAAGCAGGAGTTGTATCTGGGGTGATTGATAATTTTGACATGACTTTTCCATGGC ATTTTGATAATAGATGCAATGATGGAGTTCATTATGGAAGAGCTCCATTAAAGATGAAGTGGCGAGATGGTCAAATTGGG CATCAGTATTTTGTGGATCTCATGTTAGCTCATGTTCTTCTTAATGCACTTTGTGCCAGATAG 

Protein sequence (LotjaGi4g1v0351500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALKVKVVISPPPNQWPLWSIPVLHWRVGLLTALVLVGMVLVWSIDGCTVKTFIQLWRYRQDYQNSPFVSPYDPVSSDQS QSNTEKLGKSSIKSLLVKGHSSSWVSSELEPNLTSNLLARWSARGGEPCKDSKTVEIAIPGLDGGGKLMELSAGDVHEFG FQALDESGKVHCSGGDYFETDLSGESWKSRPLVKDFSNGSYSISLQVHPDFDGVYNLTIILLYRHFEGLKFTPWRFAYDR VLRNVTIRFYKSSVQMMPGLQTCKASDFARDVWCGRWTRHGKNDDCNIGNDGRYRCLAPDFPCTAPWCDGSLGILESNGW VYSSHCSFKMYSADSAWNCLKNRWIFFWGDSNHVDTIRNLLNFVLDLPEVHSVPRRFDMNFSNPRDSSQSVRITSIFNGH WNETQNYLGLDSLRDEGFQTLLKKYFSGETIPDTMIMNSGLHDGVHWRNIRAFSVGADYAASFWGDVMKTVKQRGLAWPR VFYRTTVATGGYARSLAFNPNKMEVFNGVFLEKLKQAGVVSGVIDNFDMTFPWHFDNRCNDGVHYGRAPLKMKWRDGQIG HQYFVDLMLAHVLLNALCAR 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 23 23 -
PANTHER 15 579 565 5.6E-287
PANTHER 15 579 565 5.6E-287
TMHMM 23 45 23 -
Phobius 24 45 22 -
Phobius 46 580 535 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0351500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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