Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0380200 |
Transcript ID | LotjaGi4g1v0380200.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Glutathione S-transferase; TAIR: AT2G29420.1 glutathione S-transferase tau 7; Swiss-Prot: sp|Q9FQA3|GST23_MAIZE Glutathione transferase GST 23; TrEMBL-Plants: tr|I3S2Z2|I3S2Z2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0380200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:75955889..75959069) extracted from Lotus japonicus Gifu genome v1.2.
TCTCTCCACCTCAAAGAGAAGTATGAAGGGAACGTTATTCTTGAATGATTGATCGATTTATCTTGATAATTACCAAAATA GCATTAATCATACCATTGTGATGATCTGTCAATTAAAAAAGTTTATCCAATGCCATTTGGTCAAAATTGCCGTCTCTAGA GTATAGAAAATTAGAAATTGAAATGGAGAGAAGTTGCTGAAATTACAAGAACTAACAAGTAAATAACAGACATATATATA AGCGATACAAATGAAATGAGATAAAAACAAAGATCATGGGAAGCCAAGAGGTGCAGCTGCTGAACTTTTTGTTGAGTCCA GTTGGTAGAAGAGTTGAATGGGCTCTAAAACTGAAGGGTGTTGATTTTGAGTATGTAGAAGAAGATATCTTCAACAAGAG CAATCTCCTTCTGGAAATGAACCCAGTTCACAAGAAGGTTCCGGTTCTTGTTCATGGCCACAAACCAATCGCTGAGTCAC TCATCATCCTTGAATACATTGATGAAATATGGAAGCAATATCCACTGTTACCTCTGCATCCTTATGAAAGAGCACATGCT CGCTTTTGGGCCAATTTAGCTGATGAGAAGGTAATTTATCATATCCCCTGTCTCTCTTTTTTTTCTTTATCTTATATTCC CTTTCTTTAAATAAATTAAATTGTTTGGTTCATTGATAGTCCGAATCATTTAAGCATCTTAGCACATATTTTGTGATTTA TTTTTTCTGAAATAGTGGAGATTATATCACGCTCACCTTAACAACAACGGAAAAATTGTTTTTCCTCCTGTCAATTCACT TGAATAATTAGAAACCAAACTAAATTAAGTGATTATGTTGTCTTAGCTGAAACAAATTTCTTCACTTCGTGTCTATATGA ATGCAACTGTTTTAAATTAGCTTCGGGAGTTGGATTAGAATCCTCTCAAGTAAATTGACAATGTCAAATGTCATATTGTT TATATTTTTCTTTATAAATAATCAAATGATTCCACAAATTTAATGGGTATAAAGAGAAATATAAACAAAAAAAATTTAAC TTCGGGAAAAATTATATTTGAGAGGATCTAGATCCGATTCCTCTAATGGTCTTACCAAGATTTCATAGGTAAGAAGAATT TTGTAGCTCATCATAGTCACATTTGACTCGAATAAGATAGGTTCAGTGGATGATCATATCTATTGTTTAAAAAAAATTGT ATTTAGAAAGAAAATTTGCTCACAATGACTATAAAGTATTATAGGCTGAAATATGTTTTTAATCCTATAAAATATATTAT TTTTAGTTTTAATTTCTAAATTTTAAAATTGGTGAATTCACTTCAGTCTTTAGTCTTTACACAAAAACTCTCTCAGTGAC TCTTTTGTCTTTAATTGCATTTCTATAATAGCTAGCGCTGGGATCGTGGGTTGCATTAATGCGTAGCAGCGGCGATGAAC AGGAAAAGAGGGTGAAGGAAGTGAGAGAAGTAATGGAGAAGTTGGAAGAAGAGATTCTGGGGAAGAAGTTCTTTGGAGGG GACAACATTGGGTACCTTGACCTTGTACTTGGTTGGATCCCTTGCTGGCTTCCTGTTTGGGAGGAAGTTGGGTCTATGCA AGTACTTGACACAAACAAATGTCCAGCTATCTCTGCTTGGGAGACCAATTTTCTTAGCCACCCTGTTATCAAGGACTGCT TACCTCCAAGGGACAAGCTGGTTGCTTATGCCCACCGTCGTAGGGAGCAATATTTTTCTATATAATGTGATGTGATAGAA AGAAAATATAAATGGTGAGTTCCTTCACTTCCTTGTGAGTTAAAACTATTGATTTCAAATACAATTTTAACTCACTATCA TGACTTCTTAAATGTGATTTATGTAAGAGGGTTAATGCGGAATATAATTAATAATGAGCATTTAAATAGATGTTATGGTT CTCATTTGTCTCATCTTTTTGTGGCTTTAATCGTCTTGGCAAGGCTTGTGGCCGAGCTAGAGCAACAAAACTAAGTACGT ACAAAGCTTCCCAAGTCCTAAATATCTAGCTAGATATACTTGAATGATTGAATTAGGGTGACAAAACTTGTTAAGCTAGA TTTTTAGGACTTGGAGGGTTATGCACATATTGAGACTGTTTAATATTTGGATGAAGTTGAACGCCTAAAAGCTAATCCAT CTAAATCTTGGTTAGTCGAATGAAATGTAGTTGAGAAGACAATCGTCCTGGTGATGACAATTTGGATTTTCTTCCATCCA TGTAGGGGTCTTTTTTTTAGTGACTCAATGAAACTAAAACAGACAACTAAACAAGACCAATACAACAACATCAGTCCAAA GCAAGAAGCGGCCTCAACTCTATCAGGGGAAATGGTCAGTTCCGGAGGCAAAACTAACAATGTAGACATAACAAAGCAAG TTTATCAACACACGTATTAGTCTCTCACATAACATGCTGGAATCAGACACGCCATAAATCCGTAGAGATCTCATCAATCT TCAATGACAAGGTTCATGTCAAGTAGTAACTAATTATTCCAAAAGTTTAAGTTGTTGGGTAAGAGTCACATGAATGATTT TATATTATTTTTCTAACACGCCCTATTACACAAGAGCCCTTTGGACTTGAAACGTTGATAGATGCACGGTGCCATCTATC ATATGCTTAAATTCATTTTTTTATCAGAAGAATTATGGGCGATAAGGATCGAACGGTAGACTGTTTGCTCATAAAGCTCT AATCTATATATTTTAGAAAAGAGGAACGTTGTGAGCCCCACCTAGCTGATTTGGCAATTCAAGAATAATTCTCACCCAAC CCTCCTCTTTGTCGGACAAGTGTGACTCTCCTATTGATTTGGACCAAAATATTACAAGTCCATTTTTATTTGAGTTTTGT ATGCACACTCATTATTGAAAGTCTTTTGAATGGTTTAACGAGCCTGTATCTTGCCTTAGCTCTTTCTGAGGAATTCTGTT TTATATCCAAATGTATTTTTTGTAAGTAACAACCTGAGTTTGTTATCTGGTTGTGCTATCTTTTAGTTTTCAAACTTTGT ATCGGTTATGGGTTTGTGGTACCCCTTGTACCCCTTTAATACAACATTGCTTATCGAAAAAAAAAAATTGAAAGTCTTTT GAATGCTGATTTTATTTTTATTTTTTTTAACCTCTCATTAATTGCTAACATAAAATTTGCA
CDS sequence (LotjaGi4g1v0380200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAGCCAAGAGGTGCAGCTGCTGAACTTTTTGTTGAGTCCAGTTGGTAGAAGAGTTGAATGGGCTCTAAAACTGAA GGGTGTTGATTTTGAGTATGTAGAAGAAGATATCTTCAACAAGAGCAATCTCCTTCTGGAAATGAACCCAGTTCACAAGA AGGTTCCGGTTCTTGTTCATGGCCACAAACCAATCGCTGAGTCACTCATCATCCTTGAATACATTGATGAAATATGGAAG CAATATCCACTGTTACCTCTGCATCCTTATGAAAGAGCACATGCTCGCTTTTGGGCCAATTTAGCTGATGAGAAGCTAGC GCTGGGATCGTGGGTTGCATTAATGCGTAGCAGCGGCGATGAACAGGAAAAGAGGGTGAAGGAAGTGAGAGAAGTAATGG AGAAGTTGGAAGAAGAGATTCTGGGGAAGAAGTTCTTTGGAGGGGACAACATTGGGTACCTTGACCTTGTACTTGGTTGG ATCCCTTGCTGGCTTCCTGTTTGGGAGGAAGTTGGGTCTATGCAAGTACTTGACACAAACAAATGTCCAGCTATCTCTGC TTGGGAGACCAATTTTCTTAGCCACCCTGTTATCAAGGACTGCTTACCTCCAAGGGACAAGCTGGTTGCTTATGCCCACC GTCGTAGGGAGCAATATTTTTCTATATAA
Protein sequence (LotjaGi4g1v0380200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSQEVQLLNFLLSPVGRRVEWALKLKGVDFEYVEEDIFNKSNLLLEMNPVHKKVPVLVHGHKPIAESLIILEYIDEIWK QYPLLPLHPYERAHARFWANLADEKLALGSWVALMRSSGDEQEKRVKEVREVMEKLEEEILGKKFFGGDNIGYLDLVLGW IPCWLPVWEEVGSMQVLDTNKCPAISAWETNFLSHPVIKDCLPPRDKLVAYAHRRREQYFSI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 1 | 84 | 84 | 1.4E-35 | ||
SFLD | 2 | 219 | 218 | 0.0 | ||
SFLD | 2 | 219 | 218 | 0.0 | – | |
ProSiteProfiles | 4 | 83 | 80 | 22.203 | ||
PANTHER | 5 | 220 | 216 | 2.4E-122 | – | |
PANTHER | 5 | 220 | 216 | 2.4E-122 | – | |
CDD | 6 | 79 | 74 | 1.30525E-38 | – | |
Pfam | 6 | 77 | 72 | 1.5E-16 | ||
SUPERFAMILY | 6 | 106 | 101 | 5.18E-24 | ||
SUPERFAMILY | 77 | 219 | 143 | 2.37E-35 | ||
Gene3D | 85 | 220 | 136 | 5.2E-46 | – | |
ProSiteProfiles | 88 | 220 | 133 | 18.441 | ||
CDD | 89 | 212 | 124 | 3.66058E-53 | – | |
Pfam | 118 | 196 | 79 | 1.5E-4 | ||
Coils | 119 | 139 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi4g1v0380200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…