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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0396900 |
| Transcript ID | LotjaGi4g1v0396900.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, expressed; TAIR: AT5G64970.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9LV81|BRTL3_ARATH Probable mitochondrial adenine nucleotide transporter BTL3; TrEMBL-Plants: tr|A0A0S3QYH5|A0A0S3QYH5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0396900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77470909..77473619) extracted from Lotus japonicus Gifu genome v1.2.
CTGGGCTGGAGCTGTTGCTGCCATGGTTTCAAGGTCTACACTCCTTAATCTCTATAGACATACTAGTTCTCATACGCATT ACAACAAACAGTTGATCTGCACAATTTTCACTACCCACTATTTTTCTGTATACACCCTTGGTTATGTTTGGTCACAAATT TGAAAGCTATATTTCCAGGGAAGCATGTTGTTTTCTTGCTTGTGCACTAGAATTTTATTGGTAGATTGTACATAGTTTCT TATTTGGCATGTTCTGGTTGGGGTGTCAGGACTTTTGTTGCTCCTCTTGAGAGACTTAAGCTGGAGTACATAGTTCGTGG TGAGCAGAAGAACCTTGTTGAGCTTATCCAGACAATTGCAGCTTCTCAAGGGTTGAAAGGCTTTTGGAAGGGGAATTTTG TAAATATTCTTCGGACGGCACCCTTTAAGGCTATCAATTTTTATGCCTATGACACGTATAGAAATAAATTGTCGAGGATG TTAGGGAACGAAGAGTCTACGAATTTGGAGAGGTTTGTTGCGGGTGCTGCTGCGGGGATTACAGCTACCTTGCTCTGCTT GCCCATGGATACTGTGAGTGGAAATTCATGACCCTGTTAGGCTTATCTTTTCTCTCAGATAACTTTCTTTTCTTGCTTTG TGTTTAAGTTTATTTGGATTGTGATGCTCTGAAGAGCACTATGATATGATGGGTATATAGCTTTATTGCTTCTATTCAAT TATAGATACATGTTCTTTGGGTTGTGATGATCTGAGAATATATGATCATGAATTAATGCTCTTTTGCGGTGTTTGTATTG CCAGCAACGACTTAATAGGGGAAATTATATTTTGTTTATATTTTATCCTAATTCAGTTATCGAAACTATAGAAGATTGCT AGCTGCTCTTCTTAGATACGCATCTCTCAAATTAGTTCACTAGTTGGTTAGTCCCACTCTTATCTGGTGGTGATCATTTA TGGTTGTTTACAGTGCTTCATATTTTCCTGATAGACTCTTGGAAGTTGTAAGAATGTGTTTGGTCATCAGTGTTGCAATT TTACCTTTAAAATATATATTTTTCCAGGATCCTTCCTGATTATAATCATTGTTAAACAACAATAACTGAAAGTTGGATCA TATGAAAAAAATAGTGTATTCTTAAGATTTTATTTGAATACCACAGGCTATATTCATAGTCTATGTCATTTGTGTCCTGT TTTTCAAATTCTGGAGCACAAAATGTCCTTCTCAAGGACTCATGTTGCCCACTCAACCAAACTATTTCAATATCGTGTTG TAGATGCATTCTAAGAGTGATTTCTTTCAGATCAGGACAGTAATGGTAGCCCCTGGTGGTGAAGCCTTAGGAGGTGTAAT TGGTGCCTTCCGCCACATGATCAAAACTGAGGGCTTCTTTTCTCTTTACAAGGGTTTAGTACCCTCCATTGTCAGCATGG CACCTTCAGGTGCTGTCTTCTATGGTGTTTATGATATTTTAAAGTCAGCATATCTGCATTCACCTGAGGGAATGAAGAGA ATCCAACATATGAAGGAAGAGACTGAAGAGCTAAATGCTTTTGACCAACTGGAATTGGGTCCTGTTAGAACTTTATTATA TGGTGCTATTGCTGGTTGTTGTGCTGAAGCTGCTACATATCCCTTTGAAGTTGTAAGAAGACAGCTTCAAATGCAAGTTC GGGCAACAAGGTTGAATACCCTGGCAACATGTGTCAAGATTGTTGAGCAAGGAGGTGTTCCTGCTTTCTATGCAGGATTA ATTCCCAGCTTATTGCAGGTATGACTACTGTTCTGGAATATATACTTTAATTTTTGAAAGTTGTACATTAAATTTCAGTA AACAGGTTAAATGAGTGTGAAATAAAGTGAGCTTTTATTTCATACAATATGAGCAGATGCCCCAGTCAGCTAGATCTTTT TTTTAATACACATTAAACAAAAAGGTTAGCACTTACAAAATTTTCGTTGTTTCTTTTCTAATTAGGGTTTCTAAATTAAA CAGAGTTCTTATGAAGCTGTATATACTATATACCTGTCATTTGTAGAAGCTGTAAATGTCCTAATAGTTTCAGTCTTTCA GAGATGAGTAAACTCTGATACTGTCATATGTCTAAGCTGGTTTACAGATGTAGATGTGCAAATAGCAGCACAGTACAATA GCTACTAACCATTTTTAGGAAATAAGCGCTTTCCTTTGTTGTGATTACGCGGTTCTGGTTGCGATAACATCAGAATTCTT GATGTTGAGGGCAATAGCGATCAAATGCGGCTAATGCGGTCACAATTTCAGCTGTGATTTGGTTGTAGAGAGTAGAGACC TTTTAAACCTTAATATTAAGGCCCTAATTACAGTCGTGGACCGCAAGTGACATCCAAAAAACAGAGTTCATTCTAGGCAA GATAAGAGAGCATGGATGAATGATTGTGTCTTATCTGTGTCTGAGAGAGGATTTGTTGATTTTTTCCAAAGCATCCCACA CTCCAAGGGATGAATCTGTACAATTTTTCTATACTTTTTGTTCCACCAATTTGAGAATTAGTTTTGATATTAGTCCATCT ATGACAAGTAATTAGGCACTAGTAATCATTTATCATTTGATTCATGAAATATTGTGTTTTTAATTGTGATTTTCAGGTGT TACCATCAGCAGCTATTAGTTACTTTGTATACGAGTTCATGAAGATAGTCCTCAAAGTAGAATCAGCTTAG
CDS sequence (LotjaGi4g1v0396900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTTCTTATTTGGCATGTTCTGGTTGGGGTGTCAGGACTTTTGTTGCTCCTCTTGAGAGACTTAAGCTGGAGTACAT AGTTCGTGGTGAGCAGAAGAACCTTGTTGAGCTTATCCAGACAATTGCAGCTTCTCAAGGGTTGAAAGGCTTTTGGAAGG GGAATTTTGTAAATATTCTTCGGACGGCACCCTTTAAGGCTATCAATTTTTATGCCTATGACACGTATAGAAATAAATTG TCGAGGATGTTAGGGAACGAAGAGTCTACGAATTTGGAGAGGTTTGTTGCGGGTGCTGCTGCGGGGATTACAGCTACCTT GCTCTGCTTGCCCATGGATACTATCAGGACAGTAATGGTAGCCCCTGGTGGTGAAGCCTTAGGAGGTGTAATTGGTGCCT TCCGCCACATGATCAAAACTGAGGGCTTCTTTTCTCTTTACAAGGGTTTAGTACCCTCCATTGTCAGCATGGCACCTTCA GGTGCTGTCTTCTATGGTGTTTATGATATTTTAAAGTCAGCATATCTGCATTCACCTGAGGGAATGAAGAGAATCCAACA TATGAAGGAAGAGACTGAAGAGCTAAATGCTTTTGACCAACTGGAATTGGGTCCTGTTAGAACTTTATTATATGGTGCTA TTGCTGGTTGTTGTGCTGAAGCTGCTACATATCCCTTTGAAGTTGTAAGAAGACAGCTTCAAATGCAAGTTCGGGCAACA AGGTTGAATACCCTGGCAACATGTGTCAAGATTGTTGAGCAAGGAGGTGTTCCTGCTTTCTATGCAGGATTAATTCCCAG CTTATTGCAGGTGTTACCATCAGCAGCTATTAGTTACTTTGTATACGAGTTCATGAAGATAGTCCTCAAAGTAGAATCAG CTTAG
Protein sequence (LotjaGi4g1v0396900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVSYLACSGWGVRTFVAPLERLKLEYIVRGEQKNLVELIQTIAASQGLKGFWKGNFVNILRTAPFKAINFYAYDTYRNKL SRMLGNEESTNLERFVAGAAAGITATLLCLPMDTIRTVMVAPGGEALGGVIGAFRHMIKTEGFFSLYKGLVPSIVSMAPS GAVFYGVYDILKSAYLHSPEGMKRIQHMKEETEELNAFDQLELGPVRTLLYGAIAGCCAEAATYPFEVVRRQLQMQVRAT RLNTLATCVKIVEQGGVPAFYAGLIPSLLQVLPSAAISYFVYEFMKIVLKVESA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 258 | 258 | - | – | |
| ProSiteProfiles | 2 | 79 | 78 | 15.627 | ||
| Gene3D | 3 | 293 | 291 | 5.0E-68 | ||
| SUPERFAMILY | 6 | 285 | 280 | 3.27E-62 | ||
| Pfam | 6 | 81 | 76 | 7.0E-13 | ||
| PANTHER | 12 | 291 | 280 | 1.7E-184 | – | |
| PANTHER | 12 | 291 | 280 | 1.7E-184 | – | |
| PRINTS | 14 | 28 | 15 | 7.3E-19 | ||
| PRINTS | 54 | 74 | 21 | 7.3E-19 | ||
| ProSiteProfiles | 89 | 174 | 86 | 22.534 | ||
| Pfam | 90 | 176 | 87 | 2.2E-18 | ||
| PRINTS | 104 | 122 | 19 | 7.3E-19 | ||
| PRINTS | 147 | 165 | 19 | 7.3E-19 | ||
| Pfam | 203 | 290 | 88 | 5.1E-18 | ||
| ProSiteProfiles | 203 | 288 | 86 | 18.437 | ||
| PRINTS | 212 | 234 | 23 | 7.3E-19 | ||
| Phobius | 259 | 282 | 24 | - | – | |
| Phobius | 283 | 294 | 12 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0396900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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