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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0428200 |
| Transcript ID | LotjaGi4g1v0428200.10 |
| Related isoforms 9 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aminopeptidase, putative; TAIR: AT1G63770.3 Peptidase M1 family protein; Swiss-Prot: sp|Q8H0S9|PSA_ARATH Puromycin-sensitive aminopeptidase; TrEMBL-Plants: tr|A0A0B2Q9W1|A0A0B2Q9W1_GLYSO Aminopeptidase N; Found in the gene: LotjaGi4g1v0428200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80249852..80253883) extracted from Lotus japonicus Gifu genome v1.2.
TAAGGTTTCTTTGTGAGTTCTCTTTTGTTTCTGTGGAAATCGATCAATTAGGGTTTCGGGATAATGGCACGGTTGGTTCT GCCATCGAAGACTCTCGCTTTTTCCAGGAAGAGTTTACTGGGTTTGATCTCCCCTGCTCCTGTGATTACCTTTACTTTCT GTTTTCTCATTCCATGTTTAATGGGTCGTTTCGAAATTGCTAAAAACTTGAAAAAAATTGAAACTTTCTCTGAAATACCG TTTTTTTTTTATACCTGTCACCTTGTTCAGTTACCACACTTGTTGGGTCTTGCTATGTATGCTTTTTTCTATTTCCTTAG AAAAATCAGTTTAGAAGAACAGGTTGAATGTAGACCCCACACAGCACTTTGTGAATTGCTTGCACAACTATGGACTGTGA TGATTGTTATCTTCATATTTGCAGCTTAACTATTTTCAGCATACAGCAAAAAGTAGCATCAGAGTTAGGCATTTCCTTGC TTCAGAGGTTTCTTTTTGATACATCATTGTTTTAAAAATAGCTTTTTGATTTAATGTTGTCTGATACTCTGATGACTGTA CTGAACTGTTGATATGGCATTTACAGGTCATTTTGCAAAAGAAGTGTTGCTCTTGTTATTCTCCTCAGCCAGTAAGTTAT TATACTTTTTGTTGGAACTTTGATCTTTATTGTTTGTCTAGTTGCTTGTTTTAATAAGATATTATACTTTTCTGTATGTC TGCATACTCATTGCATGATTGCTTAAATGATCCTGTATGTTCTTATGTTCTGCACCAGAGGCTCAAGCAATTGAGTAGGA GGCTAATTTGTTCAGTTGCCACAGAGGATTTAGCTAAGCAAGTTGAAGAACCGAAAATGGGGACACCAAGAGAAATATTC TTAAAGGATTATAAAATGCCTGATTACTACTTTGAAAGTGTAAGTTTGCAGGAATTTATACATTATGTTTCATTCACATT GTTGCTTATTTGAAACTGTTATCATTTCTTACTTCTTGCCTTGCACGGAACTATTGCAGGTGAATCTGGAATTTTCCTTG GGAGAGGAGAGCACTAAAGTTAGTTCCAAAATTGCTGTGTTTCCTCGCGTTGAAGGTAGACTATTGTGGTTCATTTTTTG ATCTTGTAACTCGTTGGTCTGGCAGAAAAATATGCAGCATCAATATCTAAGCATTTTCTTATACGTATTATTGCTCTATG TTGCGAGACAGGTTCTTCTCCCCCGCTAGTTTTAGATGGACAAGACTTATCTTTAGTTTCAATTCAGATTAATGGAAAGG CTTTAAAGGTATATATACTTTTTTTTTGAGTTGCATACTACCCACTTTGTAGAGCACTTTGTGAACAAAATCATTGGTGG AATTTCTTTGCCATATTGCTAGCTTAACAAGCAACGTTTTCATTTTCAGACAACTTATTTTAGTGTGCTGTCTAGTGTTC ACTACTATTGTGATATTTGTGCTTCCTACTTTAATCCTTAGATGTTGTTTACGTTTAGATTTTAGAAACACTTGATGTCG GGAGCAACATGGTTGGAGTGTTGTGTATCATTATTTTAACCACATTTTTATGTGTTCACCTGTAGGAGGAAGACTATCAT TTGGATGCACGCCATCTAACAATCCGTTCACCTCCAAGTGGTAAATATGATCTTGAAATTGTTACAGAGATTTACCCACA AAAAAACACATCATTAGAGGTAAATGAGATTTTTACTTGTTTAGTCTGTTTCTTCCTTGTATACATCACCTTTTCTTTTC CTCTGCTCATTTCAGACTTTGCGGGGTAGTTTGTGCTTACTATGAATTTGGTATCTTGTAGGGACTTTACAAGTCGTCTG GGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAGTTACATTTTATCAGGTTGGCATCTTAAAGCCGTTATTA TGCTGATTTGATCTTTATTTGCATAAAATAAATTATCACATCAAATTAATGGATCCTATCATCCAACAGGATCGGCCTGA TATAATGGCTAAGTATACAGTTCGCATCGAGGCAGATAAATCACTGTATCCGGTGTTATTGTCTAATGGAAACCTGCTTG AACAAGGTGACTTAGAGGTAATCTTTACTTCAAATGCATTCTAATGAGGACTATCTAGTGGCTACTACTCTATTCATGGC CTTCTTTTGTGCTTCTCTGCAGGATGGCAAGCATTATTCTGTTTGGGAGGACCCCTTCAAGAAACCTTGTTATTTGTTTG CCTTGGTTGCTGGGCAATTGCAGAGCAGAGATGACACTTTCACTACCCGTTCCGGACGGAAAGTGTCCCTTAGGATCTGG ACACCTGCAGATGACGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGATGAAGATGTCTG TCTTTACTTACTCTTTAATTTGTTGATCTGACGAGTTATTTTGATTGAAAGTTGAAAATATATTTTGTTCTGGATTCTGA AGCATTTTGCTTTTCCTGTTATATGCTTTGCATTCAGGTTTTTGGGCTTGAATATGACCTGGATCTCTTCAATGTTGTTG CTGTCCCAGATTTTAACATGTAATTTCTATCTTCCTATATTTATTTTTTCTGTCAAATTTCATTCACGTCATCACGTGAC ACTACCTATATTGTGCCTTTGTGTATTATGAGAGTCTGTGAAAGTAGCAGAGTACAGAAAGTAATATTGTGCACTTGTTT TTGTAATGGTCAGGGGAGCTATGGAAAATAAGAGCTTGAACGTACGTCTCCTTCTTGTCAGCTTGTCTTGGTTGGTTATA TGTATTCACTTTTAACATTTATGATTTCCTTCACTTGTATGCAGATTTTCAATTCCAAGCTTGTATTGGCTTCTCCAGAA ACTGCTACTGATGCAGATTATGCTGCAATATTGGGAGTTATTGGCCATGAGGTTTGTAACTGTTAGATATCATGTATTTG CATTGCTGGAGAGTAATAAACATTTCTTCAATTAATTTTTTTTTTTGGTTTTGTTAATTGTGACTGAAGTTCATTGCTTT CTATTATGCAGTATTTCCACAACTGGACTGGCAACAGGTGGTGTTTCGTATGGACTTGTTATCTTTTCAAACTTAGGATT TTATATGCTCTTATTTCCATTTTATATGTTCTAATACTTTTTCCTACTCAGTTTTATTTTAGATTTCTATTTGAAATTGG AAATATCATAATGAGTCTTCACATGAAGACAACTGGCATTTGTCCACAAGATTTTGCAGTGCATTTGTTATTTGTATGTT TATATCATTCCATCGTGGGTATGTTAAAACTCCAATTGAAGATTTCATTTAATAATAATATCAGAGTGACATGCCGTGAC TGGTTCCAGCTTAGCCTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGCATGGCCTCTTGACCTCAGTTACAATGTTTC AATTGAGACATCAACAATAATTTTCTTCCATCAAGTTAACTCTATGTCAATTATTGGCAGGAATTTTCAGCTGACTTGGG AAGTCGCACTGTAAAGCGGATTGCTGATGTTTCAAAACTTCGAAATTACCAGTTTCCACAGGTTACTTATCTTTGCCTTT TTTTTCCACCTTTGATTACAAAATTCTGCAGTGATGGTTTCTATGTTCTGATGTTTTTTATTGTAACGAGTCCGTTTAGT ATAATTTGTCATGACTAACACCATGTCACACATATTCTGATTTTCCAGGATGCAGGTCCCATGGCCCATCCAGTGCGACC ACACTCTTACATCAAGGTTAGAATTTTGAAATCCTTTCCGCGTCCACTTGTCTCGACCCCTCAGTATATGTGCTTCTAAG TTGTATTTATATATTTTTTTTCCTCCTTGACAGATGGACAACTTCTACACAGGCAAGTGTCTTTGTTTTAGACTTCTGGT TGATTGAAGATCATATTTGAAACTTTTCTCTGGACTATAGAATAATTTAGTGTTCTTCTGTCACTGATTTACTTAATTTT TTGGCAACCTTCTGTGGAATACTCTCTGCTGT
CDS sequence (LotjaGi4g1v0428200.10) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGACACCAAGAGAAATATTCTTAAAGGATTATAAAATGCCTGATTACTACTTTGAAAGTGTGAATCTGGAATTTTC CTTGGGAGAGGAGAGCACTAAAGTTAGTTCCAAAATTGCTGTGTTTCCTCGCGTTGAAGGTTCTTCTCCCCCGCTAGTTT TAGATGGACAAGACTTATCTTTAGTTTCAATTCAGATTAATGGAAAGGCTTTAAAGGAGGAAGACTATCATTTGGATGCA CGCCATCTAACAATCCGTTCACCTCCAAGTGGTAAATATGATCTTGAAATTGTTACAGAGATTTACCCACAAAAAAACAC ATCATTAGAGGGACTTTACAAGTCGTCTGGGAATTTCTGTACTCAATGTGAGGCTGAAGGCTTCCGTAAAGTTACATTTT ATCAGGATCGGCCTGATATAATGGCTAAGTATACAGTTCGCATCGAGGCAGATAAATCACTGTATCCGGTGTTATTGTCT AATGGAAACCTGCTTGAACAAGGTGACTTAGAGGATGGCAAGCATTATTCTGTTTGGGAGGACCCCTTCAAGAAACCTTG TTATTTGTTTGCCTTGGTTGCTGGGCAATTGCAGAGCAGAGATGACACTTTCACTACCCGTTCCGGACGGAAAGTGTCCC TTAGGATCTGGACACCTGCAGATGACGTACCTAAGACTGCACATGCTATGTATTCTCTGAAAGCAGCTATGAAGTGGGAT GAAGATGTTTTTGGGCTTGAATATGACCTGGATCTCTTCAATGTTGTTGCTGTCCCAGATTTTAACATGGGAGCTATGGA AAATAAGAGCTTGAACATTTTCAATTCCAAGCTTGTATTGGCTTCTCCAGAAACTGCTACTGATGCAGATTATGCTGCAA TATTGGGAGTTATTGGCCATGAGTATTTCCACAACTGGACTGGCAACAGAGTGACATGCCGTGACTGGTTCCAGCTTAGC CTGAAGGAAGGTCTCACTGTTTTTCGTGATCAGGAATTTTCAGCTGACTTGGGAAGTCGCACTGTAAAGCGGATTGCTGA TGTTTCAAAACTTCGAAATTACCAGTTTCCACAGGATGCAGGTCCCATGGCCCATCCAGTGCGACCACACTCTTACATCA AGATGGACAACTTCTACACAGGCAAGTGTCTTTGTTTTAGACTTCTGGTTGATTGA
Protein sequence (LotjaGi4g1v0428200.10) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGTPREIFLKDYKMPDYYFESVNLEFSLGEESTKVSSKIAVFPRVEGSSPPLVLDGQDLSLVSIQINGKALKEEDYHLDA RHLTIRSPPSGKYDLEIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKVTFYQDRPDIMAKYTVRIEADKSLYPVLLS NGNLLEQGDLEDGKHYSVWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLRIWTPADDVPKTAHAMYSLKAAMKWD EDVFGLEYDLDLFNVVAVPDFNMGAMENKSLNIFNSKLVLASPETATDADYAAILGVIGHEYFHNWTGNRVTCRDWFQLS LKEGLTVFRDQEFSADLGSRTVKRIADVSKLRNYQFPQDAGPMAHPVRPHSYIKMDNFYTGKCLCFRLLVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 380 | 380 | 1.7E-244 | – | |
| PANTHER | 1 | 380 | 380 | 1.7E-244 | – | |
| SUPERFAMILY | 5 | 195 | 191 | 3.14E-45 | ||
| CDD | 11 | 380 | 370 | 0.0 | – | |
| Gene3D | 14 | 197 | 184 | 5.6E-75 | ||
| Pfam | 22 | 189 | 168 | 2.0E-16 | – | |
| PRINTS | 129 | 144 | 16 | 1.1E-9 | ||
| PRINTS | 179 | 194 | 16 | 1.1E-9 | ||
| Gene3D | 199 | 282 | 84 | 8.7E-40 | – | |
| SUPERFAMILY | 207 | 380 | 174 | 7.62E-48 | – | |
| Pfam | 230 | 376 | 147 | 1.3E-32 | ||
| PRINTS | 261 | 271 | 11 | 1.1E-9 | ||
| Gene3D | 283 | 383 | 101 | 4.0E-35 | ||
| PRINTS | 297 | 312 | 16 | 1.1E-9 | ||
| PRINTS | 316 | 328 | 13 | 1.1E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. | ||
| Molecular function | Metallopeptidase activity | Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions. | ||
| Molecular function | Zinc ion binding | Interacting selectively and non-covalently with zinc (Zn) ions. |
Expression pattern of LotjaGi4g1v0428200.10, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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