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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0435800 |
| Transcript ID | LotjaGi4g1v0435800.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-glucose 4-epimerase; TAIR: AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5; Swiss-Prot: sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48; TrEMBL-Plants: tr|A0A1J7FZR9|A0A1J7FZR9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0435800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:80894963..80898288) extracted from Lotus japonicus Gifu genome v1.2.
CAAAATTCTCGCCTTCTCACAAAACGTCCTGGCGCGTAACAAACTCTCATTTTTTCTATAAAACCTTCTCTTCCGATACA GAGCTATCGTAACCGTTTTTGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCTTTCAATCAATTATGGCAACC CAAACCGTTCTCGTTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTCCAGCTTCTGCTCGGCGGTTTCAACGC CGTCGTCGTTGATAACCTCGACAATTCCTCCGAAGCCGCTATCCATAGAGTCAAGGACCTCGCCGGAGAATTCGCCGGTA ACCTTTCCTTTCACAAGGTACACGGCGCATTCTCTCGTTGTTCCACCGTTTTCGATTATAACTCAATTTTGATTGGTTGT TACTTGTTCGGTCCTCGTGATTTCATTATTATTATTATAATTTTGCTTAGGGATGATCGTAATCGTAATTTGTTTCTAAT TAGTTTTTTGACAGTTTTTTTGGGATTTATTTAATTAACAAATGTTTTAATTTATTTATTTATTTATTCATGGTGCTTTG AGAGTTTCTATTTTTTCATGCTGAATTCTTTGTGGTGGGCCCAACCAACAGGTAAAATTCACAAAAGCAAAAGTTTTGTG TGCTTTATTCCTTGAAATTAAAGGTCGGTCATAGTTTTGAATTGTGTGTTTTCATAATGATTTAGTGTGTGTTTTGAAAT ATAAGCGCACAAAAGCAACTTCCATTAGCTTTTAGGGTTATCTGTCGTGATTTTCGCGTCACCGTGTACACAAACATGCT TTTAGAATGTTTCACAAATGGCCTGACAAGTTCAAATGCACTTTTAGATGTGATGTGAGTTTAGTTGATTCTGTTATTGA ATCCAATGTTGCTCTTTTAGGTTATGATTATGTTAGGTATGCTTTCAGTTATCAGTATTAAGTATTAGACCCAAAGAAAG TAATCAGTGTTAGTATTAGACCTCATTTTATTATTATTATGCTGAACTGATTGTTTTCATTGTATATTTTCCCTCTACAG TTGGACCTCCGTGACAGAGATGCACTGGAGAAGGTTTTTGCTTCTACAAAGTATGGATTTGTGCTGAAGTTTCTGTAATT TTAATAAGGATTGCGCTTTTGCCTGCCTTTCGCTTTCCCTTGTAGTTTTATTTGAGCCCTGATATTGCAAGTTTTAACTG TTTCTTATATCTGTATCTTTTTGTCCAGGTTTGATGCTGTCATACATTTTGCTGGACTGAAAGCAGTCGGTGAAAGTGTG CAGAAACCGCTGCTTTACTATGACAACAACTTGATTGGGACAATTGTTCTACTTGAAGTCATGGCTGCCCATGGATGCAA GAAGGTAATAACTGGTCATGTACATTTAGTAGCCATTAGCCCATTAATTTGCATTGTACAATTGTTTGTTGAGACAATTC AGCAGAAACTTCATGTTTAGATGGATGGAATTGAGTTATTTCTTCTTCTAGTACCTTCATGGGTTACAAATAGTTTTGTC TTGATGCTGCAATCTGGTTTAACACTGCTATATTTCTTGTATGATTTCAGCTTGTGTTCTCATCTTCGGCCACTGTATAT GGATGGCCTAAGGAGGTCCCGTGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGGTATGATA GGAAACTATTAACAGTACTTGTTAAAACTTGGATAGTATAACTGTAGCTGATGGCAGCTTGGAAAAAAATCAGTCTTGAT TTTAATTTCATATTTTGGGCAATTAGCTAGGAACTTGGAATTGGGATTGTGGTCCTGTACAAAACACCTTTATCATTTGT TAAACAACAATGATATTTCCACTTTCAGTGTATCATTACTTTTTTCTTGAGCTAGGAGAAAAAAAAAAAGAAAACGTGGT TTTAACATATTTCAAGGAGGTCGAATGGTGTGGAAATGTCATGGTTGTTTGTAAATCATTACTAATTGCAATATTTCTCT TCGATTCTAGCAGTGATATCTAATGAGAGTTCTGTCTTACAGCTTATCATCGAGGAAATTTGTCGGGATATCTACCGTGC AGAAGAGGAATGGAAAATTATACTGCTGAGATACTTTAATCCTGTTGGTGCACATCCTAGTGGTAATATTGGCGAGGATC CTCGTGGAATTCCAAACAACCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGTCCTGCATTGACAGTTTTTGGA ACAGATTATAGTACAAGTGATGGCACTGGAGTATGTTATCTTTTTTTCTTTTTTATGTTTTAGTGAACATTTTTCCTTGA AAAATTGCAACAAAGCTCACACTGCCTCACGCCCTATCTACATAAGCCCCCACTTCCCCTCATTGGAACCATCTATTTCA ATTTCTTAAGATCTACCTTTGATTTATTCTGTGATCTGACAGGATAGACCTTATCTTTTTCTCAGGTTCGCGATTACATT CATGTTGTTGATTTAGCAGATGGGCACATAGCTGCATTGCATAAACTAGATGATCCTAAAATAGGTACTATTCCAAATTC ATCACTGTCTTCTAATAATTTATTCAGTGTGTTTGTTTTAGTAAGCTCTGGCAGTAGCCAATGGTTTTGACTTTTGAACT GATGTTTAATTACTACAAGTAATTGTTAATTTTTCTGTTTGTTCTTTTCTCAGATTTTCTTTAATGTTATGTTGTTTTGG TAAAATCTCATTCTGGGCTTGTACAGGCTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACATCAGTTTTGGAGATGG TTAAAGCTTTTGAACAGGCCTCTGGAAAGGTAACTAATTGATGATTCTATTCCTGGTTTTATATTTGTGTTGCCATCGTA TGCAGTCAATTTGTGCCATTCTTTCTTTTTCTTCCTTAGATTTTGAATTTGACAGGGTAACCATTCATGTGAGACATACT TAGTCTTTTAAGTATCATTTTATTGTATATTATGATTTAAGCTTTCTTTACCAGATGACTAACAATTTTTTAATGTTCAG AAAATTCCACTTGTAACGGCTGATCGGAGACCTGGAGATGCTGAAATTGTTTATGCATCAACTGAAAAAGCAGAAAGAGA ACTGAACTGGAAGTAAGTGTTACTTTGCTTTGCTATCAAGTGAATTATTAAGTGGCATCTATATTACTCATTTTCCACCT TTTGACTCACAAATTTATCTTCTTTGTAGGGCTAAATATGGAATCGATGAAATGTGTCGTGATCAATGGAACTGGGCTAG CAAAAACCCTTATGGCTATGGAGGATCTGAAGATTCTTCTAATTAA
CDS sequence (LotjaGi4g1v0435800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAACCCAAACCGTTCTCGTTACCGGCGGTGCCGGTTACATCGGCAGCCACACCGTCCTCCAGCTTCTGCTCGGCGG TTTCAACGCCGTCGTCGTTGATAACCTCGACAATTCCTCCGAAGCCGCTATCCATAGAGTCAAGGACCTCGCCGGAGAAT TCGCCGGTAACCTTTCCTTTCACAAGTTGGACCTCCGTGACAGAGATGCACTGGAGAAGGTTTTTGCTTCTACAAAGTTT GATGCTGTCATACATTTTGCTGGACTGAAAGCAGTCGGTGAAAGTGTGCAGAAACCGCTGCTTTACTATGACAACAACTT GATTGGGACAATTGTTCTACTTGAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCGGCCACTGTAT ATGGATGGCCTAAGGAGGTCCCGTGTACTGAAGAGTTCCCTTTGTCAGCAGCAAATCCATATGGACGAACCAAGCTTATC ATCGAGGAAATTTGTCGGGATATCTACCGTGCAGAAGAGGAATGGAAAATTATACTGCTGAGATACTTTAATCCTGTTGG TGCACATCCTAGTGGTAATATTGGCGAGGATCCTCGTGGAATTCCAAACAACCTCATGCCATTTGTTCAGCAAGTAGCAG TTGGCAGACGTCCTGCATTGACAGTTTTTGGAACAGATTATAGTACAAGTGATGGCACTGGAGTTCGCGATTACATTCAT GTTGTTGATTTAGCAGATGGGCACATAGCTGCATTGCATAAACTAGATGATCCTAAAATAGGCTGTGAGGTTTATAACTT GGGAACAGGAAAGGGAACATCAGTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGATGACTAACAATTTTT TAATGTTCAGAAAATTCCACTTGTAA
Protein sequence (LotjaGi4g1v0435800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATQTVLVTGGAGYIGSHTVLQLLLGGFNAVVVDNLDNSSEAAIHRVKDLAGEFAGNLSFHKLDLRDRDALEKVFASTKF DAVIHFAGLKAVGESVQKPLLYYDNNLIGTIVLLEVMAAHGCKKLVFSSSATVYGWPKEVPCTEEFPLSAANPYGRTKLI IEEICRDIYRAEEEWKIILLRYFNPVGAHPSGNIGEDPRGIPNNLMPFVQQVAVGRRPALTVFGTDYSTSDGTGVRDYIH VVDLADGHIAALHKLDDPKIGCEVYNLGTGKGTSVLEMVKAFEQASGKMTNNFLMFRKFHL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 289 | 289 | 2.4E-187 | – | |
| PANTHER | 1 | 289 | 289 | 2.4E-187 | – | |
| SUPERFAMILY | 1 | 288 | 288 | 3.29E-82 | ||
| CDD | 5 | 288 | 284 | 1.34142E-174 | ||
| Gene3D | 6 | 280 | 275 | 4.5E-125 | – | |
| TIGRFAM | 6 | 291 | 286 | 3.1E-114 | ||
| Pfam | 7 | 245 | 239 | 8.3E-57 | ||
| Gene3D | 199 | 289 | 91 | 4.5E-125 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | UDP-glucose 4-epimerase activity | Catalysis of the reaction: UDP-glucose = UDP-galactose. | ||
| Biological process | Galactose metabolic process | The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose. |
Expression pattern of LotjaGi4g1v0435800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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