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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0011500 |
| Transcript ID | LotjaGi5g1v0011500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT1G45130.1 beta-galactosidase 5; Swiss-Prot: sp|Q9MAJ7|BGAL5_ARATH Beta-galactosidase 5; TrEMBL-Plants: tr|Q9ZRV9|Q9ZRV9_CICAR Beta-galactosidase; Found in the gene: LotjaGi5g1v0011500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2601101..2607305) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAACCACCTCAGTTTCCAAGCTTCTCACACTGTTCTTCTTCACAGTCTTGTTCGTGTGTTCTGAGCTGATCCACTG CAGTGTCACCTACGACAAGAAAGCCATTGTCATCAATGGCCAAAGAAGGATCCTCATCTCTGGCTCCATTCACTACCCCA GAAGCACCCCTGAAGTGTGTTTTTTTTCACACCCTTTTTGCTTCACTTTTTGCCTTTTCCTTGGGAATTGATACTTGTGT TTCTGAATTCTGTTTTCTTGAAATGTGTGTTGTTAATGTTGATATTGTAGATGTGGGAGGATCTGATTCAGAAAGCCAAA CATGGAGGCCTAGATGTCATAGACACTTATGTCTTCTGGAATGTTCATGAACCATCTCCTGGCAATGTACTACTCTAGAC TCTAGATCTTCATCCTTCTGCAATTGATTCTAAATGCAAGATCAATTCTGGGAAGAAGCTTCTGCTTGAGTAGCTTCTGG ATCCCAGAATTGATTCTAAGGATCTAAACTTGCTATTAGTTTGAAATTCTCAAGTGGCCTCACAGGCTCACACTTTTTTT TTTTCTCTTCTCATTTTCTGTTATGTTGGGGGGCAGTACAACTTTGAAGGAAGATACGATTTGGTACGGTTCATTAAGAC AGTGCAGAAAGTGGGGCTCTATGTACATCTTCGAATTGGACCATATGTTTGTGCTGAGTGGAACTTTGGGTAAGTGCAGC TTTAACTTTTCTTATTTTTCACTCCCAAGCAAAATCAATTCTAATCACATGTTTCTGTGAGTAGTTTTTGAATGTCAGAA TTGATTGATCCAAGCATGCTATAAAGATCATATTCTTTATGTCCTTAAAATTTAATGTTTAGTTTCTTGGGATTAGTGCT TGTTGTTGTGATTTCCAACCACATTCTTTCATGGTGTAGAGGATTTCCTGTTTGGTTGAAGTATGTTCCTGGCATCAGTT TCAGAACAGATAATGGCCCTTTCAAGGTTGAACAGTAATTTAAGATTTCTCTTCTGAGTCTCTCTGCTCAATTATTGAAT GGTGTAAGTGACCAGAGAAATAATGAAATTCTTGTTGCATATTTTGAACTTTAGGCAGCAATGCAAGGCTTCACTCAAAA AATTGTCCAGATGATGAAGAATGAAAAGCTATTTCAATCTCAGGGTGGTCCAATCATTCTTGCTCAAGTAGGCTGTTCCT TTCACCTTTGTCCTATAACTGAAGTGTTATTCAAAAATTGTCTCCACATGAATCCTTCTACAATTGAGTGTATGTTTGGA AATGAGTCATGCACAGACTCTATCCAATGTAAGTTTGGGCAAACTCTACATATTGTTGCTTCCACTAGACATGGATCTGG AGAGAAAACGCGGTGATCAGACTCATTCTCAAACATACATTGATTCTTAATTCAGAATAAATTATTGGGAGGAGTTTCCG TGAGTAGCTTCTGCCTATCAAAATTGATTATGAGAAGAAATAAGTTTATCCAAACATGATATAAAAGTGAAATTTTGATG TTCCCAGATAAAAAAAACAACTCAGGAGTGGATCTGGCACTCCCAAATTCATAGTAACAAATCACTGGTTCAAGATAAAA TCTTAATCTTATCTCAATTTGTGCTGTAATTTCTAGATTGAGAATGAGTTCAAGCTACTAGGCAAGGGAAGGGCACTGGC ACCTGCTGATTATAAATACATAAACTGGGCTGCAAAGATGGCTGTTGGATTGGGTACGGGAGTCCCCTGGGTGATGTGCA AGGAAGATGATGCCCCAGATCCAGTGGTGAGACTTCTCAAGTTCTTGGCTACAGACTCAGTTGTTTACACTACTATTGAG GATTTCCTTCAGTAATAGTATTCCTGTTTCTTTAATGTTGTGTTTGGTTGAAAGGACAGGATAAGAAGAAGGGGAGGTGA AATAATCCTCTCGTTGTTTGGTTCATAAGGGAATGGGAGAATTTTAAAATAAATTTTACTTTTTAAGACTTCACTTTTAA AACACTTTCAAAATGAGTCAGGAAATTTAGGCTATTTTAATGTGTGTTTATATTTCAGTTGTTTTCAACTTGAAAGAACT TTCAATTCCAATGAAGTAGGGCATGTTTGGTTTTCAGTTTAGTTCGGTTGAGCACCAACTGACCTCCATAGTCCCTTCCA CATTCACAGCCTAGGGATGCCGATGCCGCATTTTGCTTTCTGAGGCTGTTGCACGTCACTTCACCCTCAAATTTTTGCGT CTAATTTCAATGTTTTGGAAAGTGTTAGAAGTTTGTTTAAGGATAAATAATTGAAATCCAAATACACCGTTTGTCGCGTA ATTCATTTACCTATAAATACCAGTTTGGCCCTCTCCATTGTTCTCCCCACTCTTTTCCTCTCCTCAGACAGTTTGATACA AACAAAACAGCTTTAGAAGAGTTACTCTCATTCTGTCTCCTTCCAACCAAACAATATGTAATAGTCATTAGATATTTATT AAGAGCTCATTATGATTCATCCAATTCTTAACCACAGATAAATGCATGTAATGGTTTTTACTGTGATGATTTCTCTCCAA ATAAACCATACAAACCAAAACTTTGGACTGAAGCTTGGAGTGGCTGGTAAGCTATACTATAGTATTGTTTTTGGAGCTGG TTGTGAAACTACAGATGCTGTCTGAATTTTGATTCCTTTACACTTTTGTTATTCTTTTCTCTTCTATCTTTTGGCTATTA GGTTTACAGAATTTGGTGGCCCAATTTATCAGCGACCAGTTGAGGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAAG GGTGGCTCATATTTCAATTATTACATGGTTGGTCACCTTCAATAATTTGTTTCTCAATTAAACAAAACATACATTGCCTT AGTTTGTTAAATGAGTATTAATCATGTGATAATGAAAAATGATAGTATCATGGAGGAACAAATTTTGGAAGATCAGCAGG AGGCCCATTCGTTACTACAAGCTATGACTATGATGCACCAATTGATGAATACGGTAAGATAATTGTACTATCAAAACATC GTGAGAAGATTAAGATTCCGTGATCACTTTGTTTGCACCAAGGGCTCACTAGGCAATATGGATAACATTACTGATATAAT TTACTGACCTATAACTTTGTCTTAAATGACAACTAAGCAATGAAGAAAGTATTGATGCATACTTGGCAATTGAACCAAAT TAATTATTATAATCCTTTTCTTTCAGATATATATCAAAATTGGCATAAGATAGTTCTGTCAAATATTCTTAGTATGTTTG GATTAACTTCTCTTTCATCAGAATCAATTTTGAAACCTAGAAACTTCTGTTTTAGAGTTGAAGATAGTTTTGTCTAATAT TCTTATTATGTTTGGATTAGCTTCTCTTTCATCAGTATCAATTCTGAAACCTAGAAACTTCTCCTCAAAATTGATTCTGG CTTCAGAATCAATTGTAGAAGTGTTTCATTACATGCGCAGCATTCATCTTCACCCATATTGGCAGGTTGTAATTTAATGC TTTACTGACTTCAGGTTTGCTCAGAGAACCTAAATATGGTCACTTGAAGGACCTTCACAAAGCTATTAAACAATGTGAAC ATGCTTTGGTTTCTTCAGATCCTACTGTTACATCCTTAGGTACCTATGAGCAGGTTAGTTGCCTCTGATATAAAGCACAA CCCTTTTCTAGTGGCTTACTTTAAGGAAAACTACCTTCAAGGTGAAAACAATGATGAATGATCCATGTCTTTCTATCTTC CAGGCTTATGTATTCTCCTCAGGAACCGGAACATGCGCAGCTTTTCTAGCAAACTTCCATTCAAACTCTGCTGCAAGAGT GACCTTCAAAAACAAGCACTATGACTTGCCTCCTTGGTCCATAAGCATCCTCCCAGATTGCAAAACAGATGTATTTAACA CCGCAAGAGTAAGATTATTTAAAGGAACCTTTTATGCTATTTTGATTAATCGCGATGGAAGGTCTTGTTCCATCGAATAT TTCTTATCAGCATTTCCCGATGCATCAAGTTATTGATTGGATTGTTATTGTTTTCATGAAGGTGAGGTTTCAAGCTTCAC AGATACAAATGCTTCCTAGCAATTCTAGGTTGTTCTCATGGGAGACCTATGATGAAGATATAACTTCTCTAGAGGAAAGT TCAAGGATTACAGCTTCAGGACTTATAGACCAGATAAACGCTACCAGAGACACTAGTGATTATCTGTGGTACATAACTAG GTGAGTTACTTTGTAAATATCCTCTAGCTTGATACAGCAATCAAATGAATTCAAAGCCTAGAGTAATTTTTCTGTTTTAT TCAAATTGATGAAACTCTTGGTCACTAGCTTGTATTCTCTTACCTTCTCAGTTCTCACTTCCCAGCAGTTGAAATCTTAC TGATTTGTGATTTGAATGCCACAGTGTTGAGATAAGTTCATCAGAGTCGTTTCTTCGAGGAGGGCACAACAAGCCTAGCA TTAGTGTGCACTCTGCAGGTCATGCTGTGCATGTTTTTATTAATGGGAAATTTTCAGGTATGTCTAAACTTGGTAGCTCT TATGTTTGTACTACATTGATGAATCTGTGTATGTTTCACCAAGATGATATGATTCCTATTTCCTTTTTCAGGCTCTGCGT TCGGGACAAGGGAAGATAGAAGTTTCACATTTAATGGCCCTGTCAACCTACGTGCTGGAACTAATAAAATAGCACTTCTT AGTGTAGCTGTTGGATTGCCTGTTAGTACCTTAGCTTGTAACTCCAAGTTGAACTAGATCATCCCTTTGAACTGCTTCAA GTGTTTGAACATACTTGGCAGTTGACAAATATGTTGCTATGATCTTTGATTGCTTTTGCACTTTTCCTTCTTTTGTTAGA ATGTTGGATACCATTTCGAAGCATGGAAGACAGGTATCACTGGTCCAGTTTTGCTCCAAGGTCTTGATCATGGACAGAAA GATTTGACATGGCAGAAATGGTCATACCAGGTATGATTCACACAAATATAACTTCTTGCTTACATAGGATTGAAATCCTT CTTTCTAACTATGATATCTTATTATCTTCACAAACAGGTTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCAAATG GGGTTTCATCTGTTGATTGGGTCAGAGAGTCACTAGCTTCTCAAAGTCTGCAACAGCTGAAATGGCACAGGGTAAGAACG AGTAAGGATCCTCTCATGTCATTGTTAAGTGAAATATCGTGTTTATCTCTCTTCATAAATATTTAAGAGATCTCACCTAT TTAATACATATGAAGAGAGATATATTCACAATTTTAACATGATAAAACACGAGAGTTTGCACATGAGAAGATCCTGATCC GGTAAAACCAGTTACTTGTTTATGACATAAAAACCTCTACTGCAGTTTATAATGAAACTTTCCCATGAACTTGGAAAATT CAGGCTTATTTCAATGCACCTGTGGGAAATGAACCATTGGCTTTGGACTTGGGAAGCATGGGAAAGGGTCAAGTATGGAT CAATGGACAGAGCATAGGAAGGTATTGGATGGTTTATGCAAAGGGTGATTGTAAACCTTGCAGCTATGCGGGGACATACC GAGAGCCAAAGTGCCAACTTGGTTGTGGACAACCTACCCAACGATGGTACTGTTTTTTCTTTTCTTTTTTTTCAAAAGAT TTAACTTCAACATTACTACCTTAAATTGAGGAAAAGGCTACTCACTTGAATGTTTGTGGTAAAATTACACACCCTTCTGT TCAGAGCCATTGAATTGTGTAGTGTGTTTGCCAGTGTCTTGTGTCATACAATGGTGTGCAGAGGGGTGTGCTGTTTTGTA TATTTGATTTTTTGTTGTGTGATTAGCATTACTCTATCTTTACATAAGAGGACTGATAACAATACAATCATTTTCCTCAC AAATGATGAGTAGACTTAGGCTATGTTTAGATACTCATTATCATATCTGAAAGTTTGTTTACATTATACTAAGTCTAAAC TGTTATCCAAACAAACTCACCCATTTTCTGTTTGGAATTTTGTAGGTACCATGTTCCAAGGTCTTGGTTAAAGCCAACAA GGAACTTAATTGTGGTTTTTGAGGAATTAGGTGGGAATCCTGAGAAAATATCTTTGGTAAAGAGGACAGTACACATTCCT GCTAGTAAACACAGTTCAGAGAACTGAACGGACATGAATGAGTAG
CDS sequence (LotjaGi5g1v0011500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGGAGGATCTGATTCAGAAAGCCAAACATGGAGGCCTAGATGTCATAGACACTTATGTCTTCTGGAATGTTCATGA ACCATCTCCTGGCAATTACAACTTTGAAGGAAGATACGATTTGGTACGGTTCATTAAGACAGTGCAGAAAGTGGGGCTCT ATGTACATCTTCGAATTGGACCATATGTTTGTGCTGAGTGGAACTTTGGAGGATTTCCTGTTTGGTTGAAGTATGTTCCT GGCATCAGTTTCAGAACAGATAATGGCCCTTTCAAGGCAGCAATGCAAGGCTTCACTCAAAAAATTGTCCAGATGATGAA GAATGAAAAGCTATTTCAATCTCAGGGTGGTCCAATCATTCTTGCTCAAATTGAGAATGAGTTCAAGCTACTAGGCAAGG GAAGGGCACTGGCACCTGCTGATTATAAATACATAAACTGGGCTGCAAAGATGGCTGTTGGATTGGGTACGGGAGTCCCC TGGGTGATGTGCAAGGAAGATGATGCCCCAGATCCAGTGATAAATGCATGTAATGGTTTTTACTGTGATGATTTCTCTCC AAATAAACCATACAAACCAAAACTTTGGACTGAAGCTTGGAGTGGCTGGTTTACAGAATTTGGTGGCCCAATTTATCAGC GACCAGTTGAGGATCTAGCATTTGCAGTTGCTCGTTTCATACAAAAGGGTGGCTCATATTTCAATTATTACATGTATCAT GGAGGAACAAATTTTGGAAGATCAGCAGGAGGCCCATTCGTTACTACAAGCTATGACTATGATGCACCAATTGATGAATA CGGTTTGCTCAGAGAACCTAAATATGGTCACTTGAAGGACCTTCACAAAGCTATTAAACAATGTGAACATGCTTTGGTTT CTTCAGATCCTACTGTTACATCCTTAGGTACCTATGAGCAGGCTTATGTATTCTCCTCAGGAACCGGAACATGCGCAGCT TTTCTAGCAAACTTCCATTCAAACTCTGCTGCAAGAGTGACCTTCAAAAACAAGCACTATGACTTGCCTCCTTGGTCCAT AAGCATCCTCCCAGATTGCAAAACAGATGTATTTAACACCGCAAGAGTGAGGTTTCAAGCTTCACAGATACAAATGCTTC CTAGCAATTCTAGGTTGTTCTCATGGGAGACCTATGATGAAGATATAACTTCTCTAGAGGAAAGTTCAAGGATTACAGCT TCAGGACTTATAGACCAGATAAACGCTACCAGAGACACTAGTGATTATCTGTGGTACATAACTAGTGTTGAGATAAGTTC ATCAGAGTCGTTTCTTCGAGGAGGGCACAACAAGCCTAGCATTAGTGTGCACTCTGCAGGTCATGCTGTGCATGTTTTTA TTAATGGGAAATTTTCAGGCTCTGCGTTCGGGACAAGGGAAGATAGAAGTTTCACATTTAATGGCCCTGTCAACCTACGT GCTGGAACTAATAAAATAGCACTTCTTAGTGTAGCTGTTGGATTGCCTAATGTTGGATACCATTTCGAAGCATGGAAGAC AGGTATCACTGGTCCAGTTTTGCTCCAAGGTCTTGATCATGGACAGAAAGATTTGACATGGCAGAAATGGTCATACCAGG TTGGCCTAAAAGGAGAGGCTATGAATTTGGTGTCTCCAAATGGGGTTTCATCTGTTGATTGGGTCAGAGAGTCACTAGCT TCTCAAAGTCTGCAACAGCTGAAATGGCACAGGGCTTATTTCAATGCACCTGTGGGAAATGAACCATTGGCTTTGGACTT GGGAAGCATGGGAAAGGGTCAAGTATGGATCAATGGACAGAGCATAGGAAGGTATTGGATGGTTTATGCAAAGGGTGATT GTAAACCTTGCAGCTATGCGGGGACATACCGAGAGCCAAAGTGCCAACTTGGTTGTGGACAACCTACCCAACGATGGTAC CATGTTCCAAGGTCTTGGTTAAAGCCAACAAGGAACTTAATTGTGGTTTTTGAGGAATTAGGTGGGAATCCTGAGAAAAT ATCTTTGGTAAAGAGGACAGTACACATTCCTGCTAGTAAACACAGTTCAGAGAACTGA
Protein sequence (LotjaGi5g1v0011500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWEDLIQKAKHGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVP GISFRTDNGPFKAAMQGFTQKIVQMMKNEKLFQSQGGPIILAQIENEFKLLGKGRALAPADYKYINWAAKMAVGLGTGVP WVMCKEDDAPDPVINACNGFYCDDFSPNKPYKPKLWTEAWSGWFTEFGGPIYQRPVEDLAFAVARFIQKGGSYFNYYMYH GGTNFGRSAGGPFVTTSYDYDAPIDEYGLLREPKYGHLKDLHKAIKQCEHALVSSDPTVTSLGTYEQAYVFSSGTGTCAA FLANFHSNSAARVTFKNKHYDLPPWSISILPDCKTDVFNTARVRFQASQIQMLPSNSRLFSWETYDEDITSLEESSRITA SGLIDQINATRDTSDYLWYITSVEISSSESFLRGGHNKPSISVHSAGHAVHVFINGKFSGSAFGTREDRSFTFNGPVNLR AGTNKIALLSVAVGLPNVGYHFEAWKTGITGPVLLQGLDHGQKDLTWQKWSYQVGLKGEAMNLVSPNGVSSVDWVRESLA SQSLQQLKWHRAYFNAPVGNEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGDCKPCSYAGTYREPKCQLGCGQPTQRWY HVPRSWLKPTRNLIVVFEELGGNPEKISLVKRTVHIPASKHSSEN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 680 | 680 | 0.0 | – | |
| Gene3D | 1 | 288 | 288 | 5.3E-97 | – | |
| PANTHER | 1 | 680 | 680 | 0.0 | ||
| Pfam | 1 | 284 | 284 | 1.2E-107 | ||
| SUPERFAMILY | 1 | 289 | 289 | 2.47E-94 | ||
| PRINTS | 2 | 20 | 19 | 1.5E-68 | ||
| PRINTS | 57 | 76 | 20 | 1.5E-68 | ||
| PRINTS | 114 | 129 | 16 | 1.5E-68 | ||
| ProSitePatterns | 116 | 128 | 13 | - | ||
| PRINTS | 195 | 210 | 16 | 1.5E-68 | ||
| PRINTS | 232 | 247 | 16 | 1.5E-68 | ||
| PRINTS | 252 | 268 | 17 | 1.5E-68 | ||
| Pfam | 292 | 363 | 72 | 7.0E-27 | ||
| SUPERFAMILY | 347 | 519 | 173 | 1.94E-25 | ||
| SUPERFAMILY | 528 | 675 | 148 | 9.48E-26 | ||
| Gene3D | 542 | 677 | 136 | 9.3E-14 | ||
| PRINTS | 565 | 579 | 15 | 1.5E-68 | ||
| PRINTS | 592 | 608 | 17 | 1.5E-68 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi5g1v0011500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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