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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • PR00742
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 86 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 0.070s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0057859.1
n.a. PREDICTED: beta-galactosidase 5-like [Cicer arietinum] gi|502126169|ref|XP_004499206.1| chr0 19024014 19032910 +
2 domain predictions
2 GO terms
Lj0g3v0060619.1
n.a. PREDICTED: beta-galactosidase 1-like [Cicer arietinum] gi|502081306|ref|XP_004486826.1| chr0 20220576 20224866 -
2 domain predictions
2 GO terms
Lj0g3v0060629.1
n.a. PREDICTED: beta-galactosidase 1-like [Glycine max] gi|356526021|ref|XP_003531618.1| chr0 20224714 20226884 -
2 domain predictions
2 GO terms
Lj0g3v0073259.1
n.a. PREDICTED: beta-galactosidase-like [Cicer arietinum] gi|502085887|ref|XP_004488039.1| chr0 27438321 27440667 +
2 domain predictions
2 GO terms
Lj0g3v0086549.1
n.a. Beta-galactosidase [Medicago truncatula] gi|357455519|ref|XP_003598040.1| chr0 34968797 34971304 +
2 domain predictions
2 GO terms
Lj0g3v0211009.1
n.a. PREDICTED: beta-galactosidase-like [Glycine max] gi|356556286|ref|XP_003546457.1| chr0 106239127 106240573 +
2 domain predictions
2 GO terms
Lj0g3v0252889.1
n.a. PREDICTED: beta-galactosidase 13-like [Cicer arietinum] gi|502130666|ref|XP_004500729.1| chr0 131225592 131226146 +
2 domain predictions
2 GO terms
Lj0g3v0258789.1
n.a. PREDICTED: beta-galactosidase 8-like isoform 1 [Glycine max] gi|356550171|ref|XP_003543462.1| chr0 134356297 134362988 +
2 domain predictions
2 GO terms
Lj0g3v0267769.1
n.a. PREDICTED: beta-galactosidase 8-like [Glycine max] gi|356539454|ref|XP_003538213.1| chr0 138747004 138751955 -
2 domain predictions
2 GO terms
Lj0g3v0285159.1
n.a. PREDICTED: beta-galactosidase 3-like [Glycine max] gi|356502950|ref|XP_003520277.1| chr0 147966834 147972763 -
2 domain predictions
2 GO terms
Lj0g3v0285689.1
n.a. Beta-galactosidase [Medicago truncatula] gi|357455519|ref|XP_003598040.1| chr0 148329093 148331435 -
2 domain predictions
2 GO terms
Lj0g3v0343709.1
n.a. Beta-galactosidase [Medicago truncatula] gi|357449773|ref|XP_003595163.1| chr0 180226507 180231196 -
2 domain predictions
2 GO terms
Lj1g3v0861760.1
n.a. PREDICTED: beta-galactosidase 16-like [Glycine max] gi|356507642|ref|XP_003522573.1| chr1 11011691 11022488 -
2 domain predictions
2 GO terms
Lj1g3v1362120.1
n.a. PREDICTED: beta-galactosidase 10-like [Glycine max] gi|356508931|ref|XP_003523206.1| chr1 16319525 16323760 -
2 domain predictions
2 GO terms
Lj1g3v1362120.2
n.a. PREDICTED: beta-galactosidase 10-like [Glycine max] gi|356508931|ref|XP_003523206.1| chr1 16319525 16328061 -
2 domain predictions
2 GO terms
Lj1g3v1362130.1
n.a. PREDICTED: beta-galactosidase 6-like [Glycine max] gi|356518798|ref|XP_003528064.1| chr1 16330417 16337764 -
2 domain predictions
2 GO terms
Lj1g3v1362130.2
n.a. PREDICTED: beta-galactosidase 6-like [Glycine max] gi|356518798|ref|XP_003528064.1| chr1 16331145 16337764 -
2 domain predictions
2 GO terms
Lj1g3v2138370.1
n.a. PREDICTED: beta-galactosidase 3-like isoform 1 [Glycine max] gi|356509960|ref|XP_003523710.1| chr1 25648362 25653287 +
2 domain predictions
2 GO terms
Lj1g3v2138370.2
n.a. PREDICTED: beta-galactosidase 3-like isoform 2 [Glycine max] gi|356509962|ref|XP_003523711.1| chr1 25651584 25653287 +
2 domain predictions
2 GO terms
Lj1g3v2139530.1
n.a. PREDICTED: beta-galactosidase 3-like [Cicer arietinum] gi|502161230|ref|XP_004512085.1| chr1 25682466 25688436 -
2 domain predictions
2 GO terms
Lj2g3v1728780.1
n.a. PREDICTED: beta-galactosidase 3-like [Cicer arietinum] gi|502161230|ref|XP_004512085.1| chr2 26533291 26539601 +
2 domain predictions
2 GO terms
Lj2g3v1728780.2
n.a. PREDICTED: beta-galactosidase 3-like [Cicer arietinum] gi|502161230|ref|XP_004512085.1| chr2 26533417 26534904 +
2 domain predictions
2 GO terms
Lj3g3v0115970.1
n.a. PREDICTED: beta-galactosidase 7-like [Glycine max] gi|356558952|ref|XP_003547766.1| chr3 852709 853414 +
2 domain predictions
2 GO terms
Lj3g3v0307970.1
n.a. PREDICTED: beta-galactosidase 1-like [Cicer arietinum] gi|502081306|ref|XP_004486826.1| chr3 2279285 2285448 +
2 domain predictions
2 GO terms
Lj3g3v0323160.1
n.a. Beta-galactosidase 17 [Theobroma cacao] gi|508779864|gb|EOY27120.1| chr3 2361968 2376967 -
2 domain predictions
2 GO terms
Lj3g3v0323160.2
n.a. Beta-galactosidase 17 [Theobroma cacao] gi|508779864|gb|EOY27120.1| chr3 2362354 2376967 -
2 domain predictions
2 GO terms
Lj3g3v2693100.3
n.a. PREDICTED: beta-galactosidase 1-like [Glycine max] gi|356526021|ref|XP_003531618.1| chr3 32851765 32856936 -
2 domain predictions
2 GO terms
Lj3g3v2693100.4
n.a. PREDICTED: beta-galactosidase 1-like [Glycine max] gi|356526021|ref|XP_003531618.1| chr3 32851765 32856936 -
2 domain predictions
2 GO terms
Lj3g3v3086090.1
n.a. Beta-galactosidase 6 [Aegilops tauschii] gi|475579573|gb|EMT18371.1| chr3 38782842 38786774 -
2 domain predictions
2 GO terms
Lj3g3v3086100.1
n.a. PREDICTED: beta-galactosidase 8-like [Glycine max] gi|356539454|ref|XP_003538213.1| chr3 38789180 38808300 -
2 domain predictions
2 GO terms
Lj3g3v3086100.2
n.a. PREDICTED: beta-galactosidase 8-like [Glycine max] gi|356539454|ref|XP_003538213.1| chr3 38796406 38808300 -
2 domain predictions
2 GO terms
Lj3g3v3453440.1
n.a. PREDICTED: beta-galactosidase 13-like [Cicer arietinum] gi|502144994|ref|XP_004505828.1| chr3 42230468 42235844 +
2 domain predictions
2 GO terms
Lj4g3v2141350.1
n.a. PREDICTED: beta-galactosidase-like [Glycine max] gi|356564794|ref|XP_003550633.1| chr4 29734033 29739817 +
2 domain predictions
2 GO terms
Lj4g3v2214670.1
n.a. PREDICTED: beta-galactosidase-like [Glycine max] gi|356545784|ref|XP_003541315.1| chr4 30331370 30335477 +
2 domain predictions
2 GO terms
Lj4g3v2603610.1
n.a. PREDICTED: beta-galactosidase 9-like [Cicer arietinum] gi|502140836|ref|XP_004504354.1| chr4 34829667 34846560 +
2 domain predictions
2 GO terms
Lj4g3v2603610.2
n.a. PREDICTED: beta-galactosidase 9-like [Cicer arietinum] gi|502140836|ref|XP_004504354.1| chr4 34831292 34846560 +
2 domain predictions
2 GO terms
Lj4g3v2826850.2
n.a. PREDICTED: beta-galactosidase 6-like [Glycine max] gi|356527530|ref|XP_003532362.1| chr4 37911394 37918483 -
2 domain predictions
2 GO terms
Lj4g3v2826850.3
n.a. PREDICTED: beta-galactosidase 6-like [Glycine max] gi|356527530|ref|XP_003532362.1| chr4 37911394 37918483 -
2 domain predictions
2 GO terms
Lj5g3v0134260.1
n.a. beta galactosidase [Vigna radiata] gi|7682680|gb|AAF67342.1| chr5 1446134 1447295 +
2 domain predictions
2 GO terms
Lj5g3v0134270.1
n.a. PREDICTED: beta-galactosidase 5-like [Cicer arietinum] gi|502126169|ref|XP_004499206.1| chr5 1447290 1452725 +
2 domain predictions
2 GO terms
LotjaGi1g1v0263200.3
n.a. Beta-galactosidase; TAIR: AT1G77410.1 beta-galactosidase 16; Swiss-Prot: sp|Q8GX69|BGA16_ARATH Beta-galactosidase 16; TrEMBL-Plants: tr|V7AXV3|V7AXV3_PHAVU Beta-galactosidase; Found in the gene: LotjaGi1g1v0263200 LjG1.1_chr1 64485360 64496138 +
2 domain predictions
2 GO terms
LotjaGi1g1v0323900.1
n.a. Beta-galactosidase; TAIR: AT5G63810.1 beta-galactosidase 10; Swiss-Prot: sp|Q5N8X6|BGAL3_ORYSJ Beta-galactosidase 3; TrEMBL-Plants: tr|A0A0B2RCT6|A0A0B2RCT6_GLYSO Beta-galactosidase 10; Found in the gene: LotjaGi1g1v0323900 LjG1.1_chr1 77568060 77576525 -
2 domain predictions
2 GO terms
LotjaGi1g1v0323900.2
n.a. Beta-galactosidase; TAIR: AT5G63810.1 beta-galactosidase 10; Swiss-Prot: sp|Q5N8X6|BGAL3_ORYSJ Beta-galactosidase 3; TrEMBL-Plants: tr|A0A0R0KAT4|A0A0R0KAT4_SOYBN Beta-galactosidase; Found in the gene: LotjaGi1g1v0323900 LjG1.1_chr1 77568072 77576604 -
2 domain predictions
2 GO terms
LotjaGi1g1v0323900.3
n.a. Beta-galactosidase; TAIR: AT5G63810.1 beta-galactosidase 10; Swiss-Prot: sp|Q9FN08|BGA10_ARATH Beta-galactosidase 10; TrEMBL-Plants: tr|A0A0B2PJT1|A0A0B2PJT1_GLYSO Beta-galactosidase; Found in the gene: LotjaGi1g1v0323900 LjG1.1_chr1 77569606 77576343 -
2 domain predictions
2 GO terms
LotjaGi1g1v0324000.1
n.a. Beta-galactosidase; TAIR: AT5G63800.1 Glycosyl hydrolase family 35 protein; Swiss-Prot: sp|Q9FFN4|BGAL6_ARATH Beta-galactosidase 6; TrEMBL-Plants: tr|I1KBP5|I1KBP5_SOYBN Beta-galactosidase; Found in the gene: LotjaGi1g1v0324000 LjG1.1_chr1 77578928 77586393 -
2 domain predictions
2 GO terms
LotjaGi1g1v0324000.2
n.a. Beta-galactosidase; TAIR: AT5G63800.1 Glycosyl hydrolase family 35 protein; Swiss-Prot: sp|Q9FFN4|BGAL6_ARATH Beta-galactosidase 6; TrEMBL-Plants: tr|I1KBP5|I1KBP5_SOYBN Beta-galactosidase; Found in the gene: LotjaGi1g1v0324000 LjG1.1_chr1 77579038 77586401 -
2 domain predictions
2 GO terms
LotjaGi1g1v0423300.1
n.a. Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|A0A151TC90|A0A151TC90_CAJCA Beta-galactosidase; Found in the gene: LotjaGi1g1v0423300 LjG1.1_chr1 91751288 91756773 +
2 domain predictions
2 GO terms
LotjaGi1g1v0423300.2
n.a. Beta-galactosidase; TAIR: AT4G36360.1 beta-galactosidase 3; Swiss-Prot: sp|Q9SCV9|BGAL3_ARATH Beta-galactosidase 3; TrEMBL-Plants: tr|A0A151TC90|A0A151TC90_CAJCA Beta-galactosidase; Found in the gene: LotjaGi1g1v0423300 LjG1.1_chr1 91751546 91756226 +
2 domain predictions
2 GO terms
LotjaGi1g1v0559100.1
n.a. Beta-galactosidase; TAIR: AT2G16730.1 glycosyl hydrolase family 35 protein; Swiss-Prot: sp|Q9SCU9|BGA13_ARATH Beta-galactosidase 13; TrEMBL-Plants: tr|G7J8I0|G7J8I0_MEDTR Beta-galactosidase; Found in the gene: LotjaGi1g1v0559100 LjG1.1_chr1 109142838 109147384 +
2 domain predictions
2 GO terms
LotjaGi2g1v0361100.1
n.a. Beta-galactosidase; TAIR: AT2G28470.1 beta-galactosidase 8; Swiss-Prot: sp|Q9SCV4|BGAL8_ARATH Beta-galactosidase 8; TrEMBL-Plants: tr|A0A0B2S2A3|A0A0B2S2A3_GLYSO Beta-galactosidase; Found in the gene: LotjaGi2g1v0361100 LjG1.1_chr2 85856325 85868186 -
2 domain predictions
2 GO terms