Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0011800 |
| Transcript ID | LotjaGi5g1v0011800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Peroxidase; TAIR: AT1G44970.1 Peroxidase superfamily protein; Swiss-Prot: sp|Q96512|PER9_ARATH Peroxidase 9; TrEMBL-Plants: tr|V7CTM4|V7CTM4_PHAVU Peroxidase; Found in the gene: LotjaGi5g1v0011800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2641791..2644111) extracted from Lotus japonicus Gifu genome v1.2.
AGTGAACATACATACAAACAATCATCCAAACAAGCTCTTAAACTCAATTGCCACTTGTCACCATGACTCCTTTCATCAAA GTTTCTCTTGCAATAGCTTTTCTCTCAGTTACACTCTCTCAAGCTCACCCTGATGGCTTCCATTTTGGCTGGGGTGGTCG TGGTGGAACTGGAGGAATGTCTTTTGGTCTCTCTCCTCAATTCTATCAGTTTTCATGCCCTCAAGCTAATGACATTGTCA TGTCAGTGTTGGAGAAGGCCATTTCTAAGGACATGAGGATGGCTGCTTCTCTTCTCAGACTTCACTTTCATGACTGCTTT GTGCAGGTAAAAGGCCTAGTGAAAACAATAACAATAATGTTAAATAAAGTCAAGTTCATTGCAAGAACAAAAAAAGATGT TCATTTCATGAGGAATTTACATTGCCAGTACACGAAACTATTAACATGTTTGATTCCAGGGTGAAATGTGTTTTTATCTT TGTTGAGCTGTTTTCTAGTTTTGATTGTTTACAATTGTTGAATTGCTTCATTTTCTCTAGCATGCACATGTTCAACAAAA AAATATTCACTTCATGAGGAGTTTACAAGAAACTATTAGCATGTTTGGTTGCACAGTGGGATGTTCTAGAAATCCTAGTT TCTAGTAACTCTTTGATTTTGTGCAATTCGTGAAATCAAACACGTTGTATCTTTCTTAAGCTGTTTTGTACTAGTTTAGA TTGTTTACAATTGTTGAATTGCTTTAGGTTCTTTAGCATGCACATTTTCAAGGTTCTAAATTTTCTTTTTCCTCTTCTTT TTAACAACAGGGTTGTGATGCATCAATTTTGTTGGATGATAGTGCGACAATTGTTAGTGAGAAAAATGCAGGACCTAACA AAAATTCTGTCAGAGGTTATAAAGTGATTGATGAGATCAAGTCCAAGTTGGAAGAAGCATGTCCTCTTACTGTCTCCTGT GCTGACATTGTTGCCCTTGCTGCCAGGGGATCCACTATTCTAGTAAGAAAAACACACCCACTTGGCACTTGGCACTTGTC TCAAATTGATACAACCCAATATTTTCTACTTTGCATGTTAGAGTATAGATAGATAGGTATTTAACACAATGAACATAAAT TAATCTTAATCATATAATCATAATGGATGGTCAAGATTATATTCAAGTAAAACAATATTGAATATTCATATATGGTTGGC TAACAATAAAAATAATTTTTCTATGAAAACTTTTCTCCAATCCCGATTTTTAAACACTCAAACAGTATCCACAACCTACG GTACTCTTTCTTTCTTCAAATTTGGGTGTGAGGTGCCTAACAAACATTATTGCTTCTCTTGTTAGATATGTTCCCATTTA ACACACACATAAACACATTATCCATTTGCATGATTTAAAACTCATTTATTTTTCTGAAACAGAGTGGAGGACCTAACTGG GAGCTCCCATTAGGCAGGAGAGACTCAAAAACTGCAAGCCTCAGAGGTGCAAACAAGAACATTCCCCCACCAAATGCCAC CATTGAAAGTCTCCTAACGTTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTCGTTGCCCTCTCAGGTGGAATTTCAA CTTTTTATGCCATATTATTCTACTTGTGTTTGAGAAAACTTATTTAAGTTTATCTTATAGCATAAACTCTTATTCAAATG TTTAGATAAGTTTATAAAAGTAGTTACGATCTAACTATATGTTGTTTTGAGCTTATTTTTATAAGTTGTTCATATTAGCT TAGGGATACATACATACAAGCTATTTTGAGATGATTTCATTAAACTTCTCAAATTAGTGGGTTATGTGATAAGAGGTTAT CGACGTAAACGCTTAACTAACTTGTTTATCCGAACGCACCTTGACTCACATTTTAACTTGTTGGCAAGGTGCCCATACCA TTGGGGTGGCAAGATGTGCAACATTCAAGCAGAGACTGTACAACCACAATGGAAACAACCAACCAGATGAGAATCTAGAA AAGTCCTTTTACTCCGGTTTGAAGACAGTGTGCCCAAAATCAGGTGGTGACAACCTGATATCTCCCTTGGACTTTGGCTC CCCGAGAATGTTTGACAACACCTACTTCAAGCTCATACTCGGAGGAAAAGGTCTTCTCAATTCAGATGAAGTGCTTCTCA CAGGGAGTGTTAAGGAGACTCGTGAACTGGTCAAGAAATATGCACAAGATGAGGCACTCTTCTTTGAGCAATTTGCCTTG TCCATGATCAAGATGGGGAACCTTCGTCCTCTCACTGGATTTAATGGTGAAGTTAGGAAGAATTGTCACCGAGTTAATTA A
CDS sequence (LotjaGi5g1v0011800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACTCCTTTCATCAAAGTTTCTCTTGCAATAGCTTTTCTCTCAGTTACACTCTCTCAAGCTCACCCTGATGGCTTCCA TTTTGGCTGGGGTGGTCGTGGTGGAACTGGAGGAATGTCTTTTGGTCTCTCTCCTCAATTCTATCAGTTTTCATGCCCTC AAGCTAATGACATTGTCATGTCAGTGTTGGAGAAGGCCATTTCTAAGGACATGAGGATGGCTGCTTCTCTTCTCAGACTT CACTTTCATGACTGCTTTGTGCAGGGTTGTGATGCATCAATTTTGTTGGATGATAGTGCGACAATTGTTAGTGAGAAAAA TGCAGGACCTAACAAAAATTCTGTCAGAGGTTATAAAGTGATTGATGAGATCAAGTCCAAGTTGGAAGAAGCATGTCCTC TTACTGTCTCCTGTGCTGACATTGTTGCCCTTGCTGCCAGGGGATCCACTATTCTAAGTGGAGGACCTAACTGGGAGCTC CCATTAGGCAGGAGAGACTCAAAAACTGCAAGCCTCAGAGGTGCAAACAAGAACATTCCCCCACCAAATGCCACCATTGA AAGTCTCCTAACGTTTTTCAAGCGTCAAGGCCTTGATGAAGTAGACCTCGTTGCCCTCTCAGGTGCCCATACCATTGGGG TGGCAAGATGTGCAACATTCAAGCAGAGACTGTACAACCACAATGGAAACAACCAACCAGATGAGAATCTAGAAAAGTCC TTTTACTCCGGTTTGAAGACAGTGTGCCCAAAATCAGGTGGTGACAACCTGATATCTCCCTTGGACTTTGGCTCCCCGAG AATGTTTGACAACACCTACTTCAAGCTCATACTCGGAGGAAAAGGTCTTCTCAATTCAGATGAAGTGCTTCTCACAGGGA GTGTTAAGGAGACTCGTGAACTGGTCAAGAAATATGCACAAGATGAGGCACTCTTCTTTGAGCAATTTGCCTTGTCCATG ATCAAGATGGGGAACCTTCGTCCTCTCACTGGATTTAATGGTGAAGTTAGGAAGAATTGTCACCGAGTTAATTAA
Protein sequence (LotjaGi5g1v0011800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTPFIKVSLAIAFLSVTLSQAHPDGFHFGWGGRGGTGGMSFGLSPQFYQFSCPQANDIVMSVLEKAISKDMRMAASLLRL HFHDCFVQGCDASILLDDSATIVSEKNAGPNKNSVRGYKVIDEIKSKLEEACPLTVSCADIVALAARGSTILSGGPNWEL PLGRRDSKTASLRGANKNIPPPNATIESLLTFFKRQGLDEVDLVALSGAHTIGVARCATFKQRLYNHNGNNQPDENLEKS FYSGLKTVCPKSGGDNLISPLDFGSPRMFDNTYFKLILGGKGLLNSDEVLLTGSVKETRELVKKYAQDEALFFEQFALSM IKMGNLRPLTGFNGEVRKNCHRVN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 23 | 23 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 21 | 21 | - | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| Phobius | 19 | 23 | 5 | - | – | |
| Phobius | 24 | 344 | 321 | - | – | |
| PANTHER | 26 | 341 | 316 | 2.5E-156 | – | |
| PANTHER | 26 | 341 | 316 | 2.5E-156 | – | |
| SUPERFAMILY | 42 | 344 | 303 | 1.25E-111 | ||
| ProSiteProfiles | 42 | 344 | 303 | 78.051 | ||
| CDD | 42 | 343 | 302 | 9.74068E-176 | ||
| Gene3D | 47 | 344 | 298 | 1.5E-119 | – | |
| PRINTS | 52 | 71 | 20 | 2.5E-62 | ||
| Pfam | 61 | 308 | 248 | 7.4E-74 | ||
| ProSitePatterns | 74 | 85 | 12 | - | ||
| PRINTS | 74 | 88 | 15 | 1.7E-31 | ||
| PRINTS | 76 | 96 | 21 | 2.5E-62 | ||
| PRINTS | 116 | 129 | 14 | 2.5E-62 | ||
| PRINTS | 135 | 145 | 11 | 2.5E-62 | ||
| PRINTS | 136 | 153 | 18 | 1.7E-31 | ||
| PRINTS | 154 | 169 | 16 | 2.5E-62 | ||
| PRINTS | 154 | 166 | 13 | 1.7E-31 | ||
| Gene3D | 180 | 323 | 144 | 1.5E-119 | – | |
| PRINTS | 201 | 213 | 13 | 2.5E-62 | ||
| ProSitePatterns | 202 | 212 | 11 | - | ||
| PRINTS | 202 | 217 | 16 | 1.7E-31 | ||
| PRINTS | 260 | 275 | 16 | 2.5E-62 | ||
| PRINTS | 262 | 277 | 16 | 1.7E-31 | ||
| PRINTS | 276 | 293 | 18 | 2.5E-62 | ||
| PRINTS | 318 | 331 | 14 | 2.5E-62 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Peroxidase activity | Catalysis of the reaction: donor + hydrogen peroxide = oxidized donor + 2 H2O. | ||
| Biological process | Response to oxidative stress | Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals. | ||
| Molecular function | Heme binding | Interacting selectively and non-covalently with heme, any compound of iron complexed in a porphyrin (tetrapyrrole) ring. | ||
| Biological process | Hydrogen peroxide catabolic process | The chemical reactions and pathways resulting in the breakdown of hydrogen peroxide (H2O2). | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0011800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…