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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0046400 |
| Transcript ID | LotjaGi5g1v0046400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyamine aminopropyltransferase; TAIR: AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9S7X6|ACL5_ARATH Thermospermine synthase ACAULIS5; TrEMBL-Plants: tr|I3SH85|I3SH85_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0046400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:7867108..7872786) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTGAGGCTCCAGAGGTTTTCTACATCAATGGGTTCTCAAAGTTTGGCCATGAAACTCAACAAAACAATGGTAACCA CCAGAACCATGACTCTACCTGGTATGAGGAAGTCATTGATGATGATCTCAAATGGTCTTTTAAACTCAACAGGTTCGTCC TTCATTAGTTCGTCCTTCATTAGTTCAAATCAATGTAAATATCAGTAATGCACAAAGATTTATTTTAATTTATATTAAGT GTATGTTTGAAAAGGCAAGTCTCGGCGCAAGAATTAAGTTGTTATCATGTGACTTTTTAGTCACGGGTTGTCTAAATGAC CCATGATAAAGTTTAGGTTAAATAATTCATCATCCAATCACATTGAAGATCAACTCATTTATCTCCAATGTGATTGGATG ATGAGTTATTTAACCCGAACTTTATCATGGGTCATTTAGACAACTCCTTTAGTCACACGTTTGAGCCGTGAAATCAGAAA CTTCAAAAAATGTGAGATAAGATTATGTACATTAGATCCACAATATAGCATAATATTTGCCATGTTTATATTAAGTGTAT CTATGATTTCCTTACACAAACATTAAACAAGATTTTGACACCTTGACTCAAAGATCCGTGTTGAATATACAGTAAGTTTA TAATAGATTGTGTTACTGCTCGAAAGATTCCATTTGCTCTGTTTTTCCATATAGATTAATTTTGTTTTGTTTAGTTACAC AAACTCATTCTTTTTATCTTTTTTTTTTCCTGATAATTTTCAACAGCGTGCTCCATGAAGCGATTAGCGAGTACCAGGAC ATAGCTCTTTTAGATACAAAGCGTTTTGGAAAGGTTTGCAAGCCCTGCTAGTGCTTCTAATAGGAGCTCTGTTTTTCATT CTCCATTTACATAATTCTAGTATTGAAAAGCAAAGGGAGGAAAAAAAGGTTTCAAATGATAGTTGTTGTTATGTATGTGA TGTTTATTTGAATATGATGCATATATATAGGCCTTGGTGCTTGATGGGAAGATGCAGAGTGCTGAAAATGATGAATTCAT TTATCATGAGTGTTTGATGCACCCCCCTCTTTTATTTCATCCCAAGTAAGTATTCACTTTCTTATTTAACATAACATTAT GTTAAAAGGAAAATACTGTATTTTTTTTAGTACTTAACATGTAGAGTTCAAGCAAGTAGTTGATTCAAGTGATACATGTT TGATTCTCATAAAATAAGGTATCGAGTTTGAGTTTAGTGAATGAAAAAAAGTCTCCTCTAAAAGAGTTTGTTTCACCATA ATATAAATAGGGTTAATCATCTACTTGGTCCCTGTGGTTGTGTGGCCGTCTGAAATTAGTCCCTCCCCGAAAAATCTGAA AATCTAAGTCCTCGTGTTTGGAAAGTGTGTGGAAATTAGTCCCTCCGGCGAGGACCTGCTACACACACTTTTTCAAACGC GAGGGCTTAGATTTTCAGATTTTCCGGGGAGGGACTAATTTCAGACGGCCACACAACCACAGGGACCAAGTAGATGATTA ACCCATATAAATATTATCAACTCAAACAGAATTGGCTTGGTTGATGAAACTTGTATTATACCAACAAAAAAAACCTTCTA AAAGTGCTTGTTTATCTTAAGACATTTAATGAAAGTGAAGTTGAGAATGTAATATTTTCATATTTCGTACAAGCTTAAAA AATTTATTTTTTAGTAATATAAATTCTCAGTCATGTAACTTGACATGTTTTCTTTAAATGTCATTTTCATGTCATGAGAA TCTTATAAAAATTATATCCGACTAACAATTCCTTCTACTACAAATTTTATATTTTTCAAATTTTTAATTATATAAATTTT AAAAACATTCCCTGAAAAAGTATACAATTACAGCACATATTGCTAGTGATCACAAAATCAAACCACATATGTGTATTTGA TGACTCATGTCAATTCACCATTCTTACTAACAATTCTGTATTTCTTGTACTCTCTTAATAAAAGTTAGTTGCAAGATTAC AAATATCTTCCACTTGATTATGCTTATGCTTTCTTGGTGGACTTAATTAGGTTGTATTTATTTCATGAACCCTTTGACTA ATATGAAGAGGCATGTGTTAATGGTTTGGCAGCCCCAAAACGGTGTTTATAATGGGAGGTGGTGAAGGGTCTGCAGCAAG GGAGGCCCTCAGACACAAGTCAATGGACAGAGTAGTCATGTGTGACATTGACAAGGTTACTACCAATATAACTTCTCAAC CGTCCCTTTAATTGAAAAGTTTACAATATCCATATCTTTTACAAGTTTATCATATCCATTTAATTAATAAAACGAATTCC ATTTTTTTTCTTAAAAAAATATAAGCTGTGCATATATATAAAAGCAGTGAACTATAAAATATTAATAATGACTATCGGAT TTCAAACTAGGGTTAAGTTCCTCAAAAGTTTTTCTTTTTCTTTTTTAGGATTCTTCAAGTTGAAATATATTAATATTTAA TAGTGAAGAGATTAAGCTCGAAAAGACAGAGGGATAACAAAAACAAAAACTCCAACCATCCACAAGAATGCACAATCGCT TAATCAATCTAAAAAAAGAAAACAACTACCAAAAACCACAATATATGAAAGAAGGAACCCAAGGAAGCAAAGCTCATGAC CTAAAACCAAAACCAAGAGCGACACATACACTTAGGGTGGCCACTACTCCTTCATTTCCTCTTCCAGGCTGCGGATGACC GCCTCATCCCCACATCAAATGTACAACCCAAAAACATGCCAATAAATCACGTCTTCTTGGCTCGCGTCCAATAAGTTCAT CAAAAGTTACATATGAATTTTATAAGATTATATGTTAAATAATAATTTAGTTGATTAGAAAATCAACCATTTAATTTTGA TCTAAATTTTACATAAAAATGTTATTTGGAAAAAACTTCGGGTACTGTTTAAGTTGCGCAATGAAAAGCAATCCACTTTC TTAGTTTATTAGTGTGATCATTTTTTACTTTTTAAACTCGTGTGTTATGTTAAGATTGGACAGCAGTAAAACCAGCATTA TAGAACTGCATTTAACTTTTATCTATACTATTTTATCACATTTAAAAAAGTTATGATAGGTTAAAACTTCAATTTCTCTT ATGGTTTATTTTCACTTAGTTTTACTCCATATCTCTCTTTTGTTTTTATCATATTATTTATCATATCACTGATTTCTCGT ACTCTATTTTTAGATGTACAACGAAAAAATGGGAACATAACTTAATTTCATATTAAATAGCTAACTAATATTTTATCATT TAAAGTGTGTAACCCCTCCTTAAGGAATCAAATTGATTACAATAAATGTTTGATGGTTATAAAAATACTTAAAAAACAAA CATGTTTGATAGATGACTAAGATGTCAATATCAAAACATGGTCCATTAATAACATATAAATTTATATACTCAAGTTGTTG ACCATGCTCAAATTTATGTAATCACGTTTGGCTTTCTTATTCTTGCAGGTGGTGGTAGATTTCTGCAGAAAATACTTGAC CGCAAACAGGGAGGCATTTTCTAATAAGAAGCTGGACCTTGTCTTCAATGATGCTAAGTAAGAAGCTTGGTCACTTTCTA TCTTTACTTATAATTTAGGGGAGCACAACCTCACATATAAATGCTTCATTTATATTTTTCTTTGTTTCAAACCTTCACAC ATTTTATTTCAGAATAGAGTTTAGTGAAAATAATAATTTAGGGTCAATTTCCCTCCCTAGGACTCTTATTACTACAACAT CATTGTTATCATTTTATTTATCAATCATCCCTAAATAACGTGGTGGTATTTAAATATTTGCAAATTTGAAAGCAAGTTAT ACTCACTAAAGGTGAGAACACAAGTTCAGTCACCAGAAAATCATTTATTGAAATAAACAAATATAATTTCTCTAATTTGT GGTGGTGACACATGTCAAAGAAAAAAAAATTACAAATTTGAAATCCGTTAATCAATTAGTTCTCAGTGGCTGATAATCCC TATTATACCAATAATAGTTTAGCCTAATCCATTGAGCAATACACTAGCATAGTTCCTTCTCTTTACTCAGACCAATCATC GTATACCCTTAGAACTCCATTTTTTCCCAAGAAAAAAAGAATTTGTAAAAGGCTTGTCTAGATGACCAAAGGAAAAAAAT TGGGTTAAATCAGCACCAATAATATGTAAGAAAAGTACAATTTCTAATCCAAGTCTTTTTAGGATTATTTACACAACTTC TTTCAAAAATAAACTAACAAATTATATTCTCTTCAAGAACATGTGTGTTGCCCTTTATTTTCTTCTTGTATTGGTGGATC TCATGGAATCTTAGTCTACAAATAAGTTGAAAATTGCAAATCAAATTTTGTATTGAAGGGCTGAATTAGAGAAGAGAAAG GAGAAGTTTGATATCATTGTTGGAGATTTGGCAGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACAAAATCCTT TTATGAGAAAGTGGTGAAGCCCAAACTCAATGAGAATGGAATTTTTGTGACCCAGGTAGATTATGAACAACATCCTTGTA TGCTGTGAGCAGAATAAGCACTTTATCTATTTTTTTATTAAATATAACTTTTTTTTTCATTGCACAGGCTGGACCAGCAG GTATCTTCACACACAAGGAGGTCTTCACTTCTATATATAACACAATCAAACATGTCTTCAAATGTAAGATTATCTAATTC AAGTCTTTTGTTCTAGGATTAAACTTCAGTATCATTAACAGAGTAAACAGAGCACATGGATATTGTGTTTTAATTTTAAC TAAGCGATGTTATTGTTTCTTTTGCTTCTGGTGCAGATGTGATTGCATACACAACTCATGTACCCTCATTTGCTGACACA TGGGGATGGGTTATGGTATGTGAATTGAAAAGAAAAATACTTGTTTTTTTCTTCCTTTCTTGCAATTAAGTGCATGTTTC AAATCATTTTACATGCATGTTTTGATTAACGTTATCACTTATCACAATTGATTTGGAAAAAAATGAAAATCAATTCTAAG GAGAATTTTATGAATAGCTTCAAGATGTTAGAAATGATTATGAGAAACGAGAAACTATTTCATATATGCTATAATTAAGT ATTTAAGCATCTATTTACATATAATTTCTATGCTTAATACAGGCTTCAGATCAACCCCTGTCAATTAGTGCTGAGGTAAT GGACAAAAGGATCAATGCAAGAATAGATGGGGATCTGCTCTATCTGAATGGTGCTTGGTTCAAATCATCTACCATCATGA ATAAGACTGTTTCACATTCGTAAGTACTTGCAGTTCAAATCCTAAAACCAAAGTCCAGTAGCCCTACACAAATTTCAGAT CTTTGATAGTCCTAGTTAAATGTAGCATGTTTGTATCAACATTTTTTCTTCAAAATCGATTCTGACACGTAGAAGTTTCT CACTCAAAATTAATTTTAACTTCAGAATCATTTGAAGAAGTACTTCTTAAAATGCACTTAGCCACAACACTATAACTATT CAATGAAAACTTAAGATGCCAATGTCAACATGCTCCCCCTCCATTTGATTTTGACATCAACTGTATCATCATTGTTACAG ATTGCAGAATGAAACTCACGTCTACACAGAAGAAAATGCTAGATTTGTTCCTGGACATGGCATGGCTTATCGCATCTGA
CDS sequence (LotjaGi5g1v0046400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAGGCTCCAGAGGTTTTCTACATCAATGGGTTCTCAAAGTTTGGCCATGAAACTCAACAAAACAATGGTAACCA CCAGAACCATGACTCTACCTGGTATGAGGAAGTCATTGATGATGATCTCAAATGGTCTTTTAAACTCAACAGCGTGCTCC ATGAAGCGATTAGCGAGTACCAGGACATAGCTCTTTTAGATACAAAGCGTTTTGGAAAGGCCTTGGTGCTTGATGGGAAG ATGCAGAGTGCTGAAAATGATGAATTCATTTATCATGAGTGTTTGATGCACCCCCCTCTTTTATTTCATCCCAACCCCAA AACGGTGTTTATAATGGGAGGTGGTGAAGGGTCTGCAGCAAGGGAGGCCCTCAGACACAAGTCAATGGACAGAGTAGTCA TGTGTGACATTGACAAGGTGGTGGTAGATTTCTGCAGAAAATACTTGACCGCAAACAGGGAGGCATTTTCTAATAAGAAG CTGGACCTTGTCTTCAATGATGCTAAGGCTGAATTAGAGAAGAGAAAGGAGAAGTTTGATATCATTGTTGGAGATTTGGC AGACCCACTTGAAGATGGGCCTTGCTATCAACTCTACACAAAATCCTTTTATGAGAAAGTGGTGAAGCCCAAACTCAATG AGAATGGAATTTTTGTGACCCAGGCTGGACCAGCAGGTATCTTCACACACAAGGAGGTCTTCACTTCTATATATAACACA ATCAAACATGTCTTCAAATATGTGATTGCATACACAACTCATGTACCCTCATTTGCTGACACATGGGGATGGGTTATGGC TTCAGATCAACCCCTGTCAATTAGTGCTGAGGTAATGGACAAAAGGATCAATGCAAGAATAGATGGGGATCTGCTCTATC TGAATGGTGCTTGGTTCAAATCATCTACCATCATGAATAAGACTGTTTCACATTCGTAA
Protein sequence (LotjaGi5g1v0046400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEAPEVFYINGFSKFGHETQQNNGNHQNHDSTWYEEVIDDDLKWSFKLNSVLHEAISEYQDIALLDTKRFGKALVLDGK MQSAENDEFIYHECLMHPPLLFHPNPKTVFIMGGGEGSAAREALRHKSMDRVVMCDIDKVVVDFCRKYLTANREAFSNKK LDLVFNDAKAELEKRKEKFDIIVGDLADPLEDGPCYQLYTKSFYEKVVKPKLNENGIFVTQAGPAGIFTHKEVFTSIYNT IKHVFKYVIAYTTHVPSFADTWGWVMASDQPLSISAEVMDKRINARIDGDLLYLNGAWFKSSTIMNKTVSHS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 312 | 312 | 7.7E-181 | – | |
| PANTHER | 1 | 312 | 312 | 7.7E-181 | – | |
| Gene3D | 16 | 85 | 70 | 2.6E-16 | ||
| ProSiteProfiles | 32 | 269 | 238 | 97.798 | ||
| SUPERFAMILY | 33 | 308 | 276 | 3.96E-72 | ||
| Hamap | 33 | 310 | 278 | 30.761 | ||
| Pfam | 34 | 85 | 52 | 4.6E-14 | ||
| Gene3D | 86 | 312 | 227 | 6.7E-69 | – | |
| Pfam | 88 | 266 | 179 | 7.0E-42 | – | |
| CDD | 113 | 221 | 109 | 3.10843E-6 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0046400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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