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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0063400 |
| Transcript ID | LotjaGi5g1v0063400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ARF-GAP domain 1; TAIR: AT4G13350.1 NSP (nuclear shuttle protein)-interacting GTPase; Swiss-Prot: sp|Q8RXE7|AGD14_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD14; TrEMBL-Plants: tr|K7M6G7|K7M6G7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0063400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:10659632..10666610) extracted from Lotus japonicus Gifu genome v1.2.
CGGCAACTTTCTCTCATTGGGTGAAATGACCAAAATTTGCCTGAGAAATCTTTGCCCCTAATTTCTGAAACATCTGGAAT TCGATTCTGGCTTTGCTGAAACAACCAACTATCATATGTTGTTTCCCTTTGTCTATCATCATCATCATCATTAGGCTTGT ATTCTGATTCATCAAATTGGTGCAGGTTCATTTTCTAATAGCTTTCTTGTTTTGTTGTGTTGGTATGTAGAATAAAGGAC ATATGACTTACATGTTAAATGCAAAAAAGTTGTGCAATTTAGTGTAAGATTAGTGGTAATATAATGACAGAAAGGGGGAA AAGTGAATGAAATAGACAAGAAAATCAAATTATTCTTGTATTATTACGCATTTGATGTAAAACATATCATATTATTTAGC TTTTCAAACATAAAAAAGATAAGCATGGTGTAAAGCTTTCAGATAATGTTAATATTCCGAATTTCTGACTACATGGATCA TAAGTGATGTTTAATGTTTTGTTAGCATTAAAGAATCAAAAGGGGTTATTGAATGTTTTGTGAAAAAAAAAATCAAATTT GTGAAATCAGTAGAAAATTTATAAAGTTCTTCTCTCATTACATTTTCATTCCGCCAGAAGATGGGACATCATAAGAAAGA AGATGAAAAGACTGAAAAAGTAATTCGAGGACTTCTAAAACTTCCCGAAAATCGAAGATGCATCAACTGTAACATCCTGG TATAAAGTTACTTTTTAGCAATTTCTTTAGCCTAATTTTTTTTTGTCAAGAATTCACAACATTCCAAAAGGCTTGTTTGG CATTTCAGTATTTCTTCTATATTTCGCAGGCTTATCACTGCTTATTTCTTCCAATCTTGCTTATTGACTATTTATTTGAA TTAGGGACCGCAATATGTCTGTACCACATTCTCGACATTTGTTTGCACAAATTGCAGTGGGATACAGTAAGCATGGAATT CATTCATTTTTTGAGTAATGTTTTTTTGTTTAGAAGAGAACCCCAACGAAATGCAAGAAACAACAAATTGCTTTGTTTTT CATTTATCATGTTTTAAATTTTAGTGGGTTTACAGTTCATACAATATAACATTGTTGTTTTTTTATTACAAATTGAAGCC CGTAATGGACTGATATACATATATATATTAATATTTATTTTATCTCATTTTTTACTCCATTTAATTGTGCAAGCTTTCTG ATCCTTGTGTGAATTAGTAATTTGTTGTTGCTTACTAAGTTATATGAATTACAGTCGAGAGTTTACCCATAGAGTCAAAT CTATTTCAATGGCTAAATTTACTCCGGAAGAAGTTACAGCTCTTCAAGCAGGTGGTAATGAGGTGTGCATTATAATTCTT CAATTATATAGGCTTAAGTACATTTTCGGTCCCTATAATTTCAAAAATGCGTGATTTTGGTTCATGCAACTTCAATCACT CGAATTACGTCTCTACTTTTAAAATTAAATAAATTTGGACTAGACGTTAACTTTTCATCTAATAGCTATTAGAAAATAAA ATTAATATATATATATATATATATATATATATATATATAGGATGTATCATGTGAGAAAGGTGTTCTTATGTGAGAACATG AGAATAAATCATGACCGTTAGATCTAATCATGAACGGTCCAGATTAAAACATTAAGTCATGTGAGTTTTTAAGAAAGTCA CATGACTTTTTTAAGTGATCATGTGAGCATTAAATTGTTTTAATTTGGACTGTTCATAACATGATCTAACGGTCATGATT TATTCTCATGTTCTCACATGAGAACACCTTTATCACATGATACATCATCTATATATATATATCACAATTTTTGACATGAT AAGACCATAAAAGTAATTCATGTAATGTTAATTATTGGATGTTAATTTAAAAACAGAAGGACTTAATTAGAACATAATAA CCACTTGTTATTTAGTAAGAAATGTCTAACATTAGTCCATGAACAGAGAGCAAAGCATATTTACTTAAAAGAGTGGGATT CTTTACGCCATTCTTACCCTGATTCGTGGTAATTTTGCATATCTTGTTTATTCTATTCATAGAAATAGACTATACTGCAT ATAGTTTTCTAATTCAATTTTTTTCTTCCAGTAATATACACAAACTTCGAGATTTTATCAAGCATGTCTATGTGGACAGA AAATTTACCGGTGAAAGGAATTATTGCACTCTTCCTAGAGTTAGATTGGTAACTACTATTCACACAACTTTTTTTATCGC ATATGAGTTAATAATAAAAGATGACTAATTAAAAGAATTTTGAAACCTCTGCAATTGAGTTTCGTTAGAGCTCACTTTTG CACAATCACAAGCCCTTGATTTTTGCAATCAATGACTATGATTAATCAACATACAAAATAACTTCTTAAATTAAAAAGTT AATGATGATTTATTAGCCCTATAGGCTGCAAAGAATCTAAATTAAATTTAAAGTTCTTTTTGTTGGTTTGATTTTGTAAA CAGAATGACAAGGAGGATTCATATGAAAGTAGAAAGAAAAGTTTATTTCGTTTAGATTTCAAAAGTTCGCATTCAAGTCC TGGTGCAAGAAGTGATGACTTGAGTTTCAGATATTTATATGATGAAAGCAAGAGTCCTAAATATGCACAAAAGTATTCAA GGCGTGGAGGTTTAAGCAAAAGTCCTATAAAATTTGAGGTTGTTGATGATAGGCTCAAAGATGATGAATTCAGAAATCGT AGGCTATCAAATCTACAATCAAAGCTAAGAGCCCTTTCACTTGATAGTCAGAAGAATGTTGAAAGATCCCAACCACGCCC TGTGAGTAATATAATGGGAGAAAATTCTCCTTCTCCACAAGTAGGTGAATGAATTGTTTTCTTAAATACAACCATGTTAG CTTTTTCTAGATTTATGTTTTTGCATCGAGTCATAACTTTTTGAGGGTTAATTTGGTTAATATTTCATTCTCATACTTAA ATATGTTGCATTATTTAAAGATGTGTTTATGGTTTATGTATTTAAGTAGGTTTTTTTTAAGGAGAATAATATATATTAGA AATTTGATAGCATCATGAGAATAACCCTCTCATGGGAAGGTAAAACCCTCCTCACGCAATTTGAAAGTAGGCTTGTTAAA AGTGGACGGTGATTTATTAGCTCACCTAACTTTGTGAGCTAAAGGGGCTAACCAAAGTCTAACTAGCTTGTCAGCCAACT CACTTTATTTCAATTAAAAGTTTTATTTTCTATTAAAAAAAGAACTGAAATGTTTTTCTACTAATAAAACATCATTTCTT ATATATTTTGTTATGATAAAATTGAAATTTTGATTTTTTCCACATATATTTTCTAGTTACTAGTACTTTTTCATTTTTTA TGAATTTTATGAATTATTTTCTTTATATTAAAGTGAGCCAGCTCATCTAACCAACCAGTTCGTGGTGGATTGAGTCGAGC TATGATTTTAAAGGCTCACTACAAAAGTGACCTAGCTCAACTTAGCTCAAGTTTTGTTCAACCAGCGATCATACTCACTT TCAGATAAGTAGCACATGCAGTTTCAAGAAATACAAAAGGGTTGGTGCAAGCATGAAGTCCCATAACAATGTGAACCCAT CCCCCAAATTTTGAGGTTAAATTAGTGCACATAATCTCTAAGTCTTCTATATTCAAAAATGTATTTACGTCTATCCGAAT AAATTAACATAGAAATTAGTTCTTCTATAATTTCCATCATGCTTACTTTGACATTGTGCATCTATTATAGTCATTTGGTT TTTTTTCAGGATGTGGAAACAAGCTTCTTTTTAAAATGATAGTAATGAGTTCTTAAAATTTTCTATGATGCCTGCCATTT AGGATATTATATTGTGGTTCTATTAATTTATCAATTATTATCTAAACTAAATCTTTGATGAACTTTAATCGAAATAGGTC ACACCTTCTGCTGGCACTGGTTCTGAAGAGAAAAATTCATCTGAGAAAGTAATTAATAATACAGAAAGCACTATTGATTT GTGTTCCAAGTCTCAAGCTTCTGAAGATGCTACTGGAGTTGAAACTGAAACACCACGTATGTCACAGGAAAGTGGGAATA ATTGGGCCTCATTTGAAGCTTCTAAAGAGGACAATGCTCCTAAAACTCCAAACACCAACACTACCCTGAAATCACCTACA ATAGAAGCAAGACCTGAACCAAAATTCACAAATCCTTTAGACCTATTACTTTTTGAATTAACACCAACCACTACCACGGA GATAGAACAATCATCTAATGCAACCCCAACACAAGCTGAGACACATGATGCACAAGACTCCATTGAAGAAGTTTCACATG CTCATACACCATCAAGTATGCAATATCTTCCTTCTGCATCAGTAGATTCTAGCCTTATGACACAACCTACAAGTGCACCA GCCGAAGTTGTTGTAGATAAACATAATCTGGTGAGATATGAAACATAGATTTGTTTACATAAATTGTTGAAATGTCAATA TCACTGTTGACTTCTTCAGCCAAATACTGCTTATACATTGAATTTGAATTTAAGTTAGGCTTGACTCTACTATAAAAACA AGAGAAGATTGTATTCCCATTTATAAGGACTTATTAGGTCATATCCTTAATCAATGTAAGACATCTTAACACCCAAGCAT AGTTACTCATCTTGTTGTCTGAATTGATTGCACACAGTCACCAATTGTTCCGACTAAAGATGACACTTTGTGTGATTCTA TTGAACAATCTTTTCAAACAACCCCAGAATGTACTCATGACACCAAAGTCAATATTGTTGGCTCCCAGCCCAGCATAGTG GAAACAAGATCTATTGAAAGAAGGGAACTTCCAGAGGTATTAAATGTAGCCAAAATTCTACTATGTTATTCAGATTTACT GTTAGGAAGAATGAAAATGAGAAAATAACACATGCAGATGCACTTATTGTTAAATTAGAAAATTGTTATAACAAAAAGTG TTTCAAGATGTATTATTTTTATTTTTTTTAACAATGAACCAAATAAACCATGTTTTCCTATTTTCATGATACTCGACCCT TGATGCATATATAAATTATGTGCAGGATCTTTTTACTGCAAGCTACTTATCTGGACCTGCACCACTTGCAGGTTGGCATA ATGTTCAACCTCAAGGCATGGGCATGAGATATGGCATGCAGTTTTATCCTAGTGCAATGGTATCTTTTTATGAACCTTGT TATTGTTATTTTGTTCATCCATATATAAGTTTCCCAAGATTTTGATATGATATGGTGCTTGATTTGCAGCCTCCTTCAAC ACTTCCATTTGCACCAAAGTCTACAAACCCGTTTGAAGCATCCGAGGGGAGAGGTCTAATCCATGCTGCATCAGTATGTT CAACATTATACATTTGCAGTGTTATTGTCTTTGAATTTACATATTTTTAAAATATACCAATAACTAGTTTTAACCTTCAA AACATGTTTTTTGTTTATGTATAGTTTCCTACTATGGCTTCTTTGAATGGTGCAATGCCAACTGCATCACCCGAAACTGG CCTAATGCATGTTTCTAGCCTTGGGTCTTTAAATACAATGGTGCCTTTGTCCACAAGTTATGCAACACCCATTCCTCCAC AGACTCCCTTTGCATCTGGAGCTCCTACTGGTACTGCCATTCTTATATCATCCTTGTCTTTTAAGGAGTTTCTCTTTTTG TTTTCTTTGCTCATGGTTATTTTTTCTTTAAACTTCTCAGCCTCAGGTGTGTATTTTGATCAAGATAATGGGGAGCAACC TAGAAGGTAATTTTTACTATTGATATTATTTTGGTTTAGGTTAAATATGTTTTTGGTCCCTATAAAATATCAAATTATTG AGTCCCTAGGAGGGACTAAAGCCAAACTAAAAATACAATTTCAAGGATAGAAATTACAAAAACAAAACTTGGTCATTCGA ATTACTTTTTCTTTTGGTATTGGTCATATTGGGGACTTAAACATGTGTATTTCTAGTATTATTGATATATAGCAAATAAT TTTTTTAAGGAACCAAAAAACTATCATTATTTAGGGACTAAATTTTGGTGTGTATCTACTATATTCATTGGATTCTAAGC TATGAAGCATGCATGTCACCAAGCTAGTTTCTCTTCATTTTAAATAAGAAGAATGTCATTTCTTATTAGTGGAAATGACA CATTAAGAAAAAGATGACAAATTATAGTTTCTCTTTAAAGTCTAATAAGTCTATATGAAAAAGAGTAACTTTAATTTAAG GAGGAAGATACAATTAAATGATGAGGACATGAAGATAGTGCCAAAGATAGTTGGCACAACTGGTTTGAAATATTTGACTC TCCATTCCTCATAAGCCTTTATAGTTTTAGATATCCCTCTAAGACCACTAATACTATTGTCTAAAAATTGTACTTATAAA AGAGTAGTGCTGCCCTAACTTCTGAGCTAGGTTTCAGAGTAGAGTGAAGCCTAACCTAAATTTAAAAAATGTCTAAGAAT CATACGCCATCCTTATGTATACTCATTCAAATACTAAGTATCTTCATATGTTTATTATGACTAGAGATTACAAAGATTAT GCTAACATAAAATTTCCGGTCGAAAATGTTAATACCATTATAATTGTTGTTGATTTTTAATATTTTGTAGGTCACAAAGA ATTGATAGCTTCAATCGTGACATAACTGGTTTTGGATCTCTAGATCCCATTCAACAATCATCTGGGGAATATGTGACATC AAGAACTCCAAATTCTTTTTCCAATACAAAGCGAAACCCATTTGAATAGTTTGCCTTATTGTCATGATCTAATGTAAAAA TTGTATAGTCACCATGATCCTAAGCCAAGCTAAGTTTGTTTCTAGTTTAATATAAATTTGAAAGAACATGACCCAGACAT AATCTATAGTTCATGTAGAAAACATTACACACAAGCGAATATCATAGGATTTATTACACTTGAGTTATTCGAATTCCTTG TAACTTGTTACAGTTCTTT
CDS sequence (LotjaGi5g1v0063400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGACATCATAAGAAAGAAGATGAAAAGACTGAAAAAGTAATTCGAGGACTTCTAAAACTTCCCGAAAATCGAAGATG CATCAACTGTAACATCCTGGGACCGCAATATGTCTGTACCACATTCTCGACATTTGTTTGCACAAATTGCAGTGGGATAC ATCGAGAGTTTACCCATAGAGTCAAATCTATTTCAATGGCTAAATTTACTCCGGAAGAAGTTACAGCTCTTCAAGCAGGT GGTAATGAGAGAGCAAAGCATATTTACTTAAAAGAGTGGGATTCTTTACGCCATTCTTACCCTGATTCGTGTAATATACA CAAACTTCGAGATTTTATCAAGCATGTCTATGTGGACAGAAAATTTACCGGTGAAAGGAATTATTGCACTCTTCCTAGAG TTAGATTGAATGACAAGGAGGATTCATATGAAAGTAGAAAGAAAAGTTTATTTCGTTTAGATTTCAAAAGTTCGCATTCA AGTCCTGGTGCAAGAAGTGATGACTTGAGTTTCAGATATTTATATGATGAAAGCAAGAGTCCTAAATATGCACAAAAGTA TTCAAGGCGTGGAGGTTTAAGCAAAAGTCCTATAAAATTTGAGGTTGTTGATGATAGGCTCAAAGATGATGAATTCAGAA ATCGTAGGCTATCAAATCTACAATCAAAGCTAAGAGCCCTTTCACTTGATAGTCAGAAGAATGTTGAAAGATCCCAACCA CGCCCTGTGAGTAATATAATGGGAGAAAATTCTCCTTCTCCACAAGTCACACCTTCTGCTGGCACTGGTTCTGAAGAGAA AAATTCATCTGAGAAAGTAATTAATAATACAGAAAGCACTATTGATTTGTGTTCCAAGTCTCAAGCTTCTGAAGATGCTA CTGGAGTTGAAACTGAAACACCACGTATGTCACAGGAAAGTGGGAATAATTGGGCCTCATTTGAAGCTTCTAAAGAGGAC AATGCTCCTAAAACTCCAAACACCAACACTACCCTGAAATCACCTACAATAGAAGCAAGACCTGAACCAAAATTCACAAA TCCTTTAGACCTATTACTTTTTGAATTAACACCAACCACTACCACGGAGATAGAACAATCATCTAATGCAACCCCAACAC AAGCTGAGACACATGATGCACAAGACTCCATTGAAGAAGTTTCACATGCTCATACACCATCAAGTATGCAATATCTTCCT TCTGCATCAGTAGATTCTAGCCTTATGACACAACCTACAAGTGCACCAGCCGAAGTTGTTGTAGATAAACATAATCTGTC ACCAATTGTTCCGACTAAAGATGACACTTTGTGTGATTCTATTGAACAATCTTTTCAAACAACCCCAGAATGTACTCATG ACACCAAAGTCAATATTGTTGGCTCCCAGCCCAGCATAGTGGAAACAAGATCTATTGAAAGAAGGGAACTTCCAGAGGAT CTTTTTACTGCAAGCTACTTATCTGGACCTGCACCACTTGCAGGTTGGCATAATGTTCAACCTCAAGGCATGGGCATGAG ATATGGCATGCAGTTTTATCCTAGTGCAATGCCTCCTTCAACACTTCCATTTGCACCAAAGTCTACAAACCCGTTTGAAG CATCCGAGGGGAGAGGTCTAATCCATGCTGCATCATTTCCTACTATGGCTTCTTTGAATGGTGCAATGCCAACTGCATCA CCCGAAACTGGCCTAATGCATGTTTCTAGCCTTGGGTCTTTAAATACAATGGTGCCTTTGTCCACAAGTTATGCAACACC CATTCCTCCACAGACTCCCTTTGCATCTGGAGCTCCTACTGCCTCAGGTGTGTATTTTGATCAAGATAATGGGGAGCAAC CTAGAAGGTCACAAAGAATTGATAGCTTCAATCGTGACATAACTGGTTTTGGATCTCTAGATCCCATTCAACAATCATCT GGGGAATATGTGACATCAAGAACTCCAAATTCTTTTTCCAATACAAAGCGAAACCCATTTGAATAG
Protein sequence (LotjaGi5g1v0063400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGHHKKEDEKTEKVIRGLLKLPENRRCINCNILGPQYVCTTFSTFVCTNCSGIHREFTHRVKSISMAKFTPEEVTALQAG GNERAKHIYLKEWDSLRHSYPDSCNIHKLRDFIKHVYVDRKFTGERNYCTLPRVRLNDKEDSYESRKKSLFRLDFKSSHS SPGARSDDLSFRYLYDESKSPKYAQKYSRRGGLSKSPIKFEVVDDRLKDDEFRNRRLSNLQSKLRALSLDSQKNVERSQP RPVSNIMGENSPSPQVTPSAGTGSEEKNSSEKVINNTESTIDLCSKSQASEDATGVETETPRMSQESGNNWASFEASKED NAPKTPNTNTTLKSPTIEARPEPKFTNPLDLLLFELTPTTTTEIEQSSNATPTQAETHDAQDSIEEVSHAHTPSSMQYLP SASVDSSLMTQPTSAPAEVVVDKHNLSPIVPTKDDTLCDSIEQSFQTTPECTHDTKVNIVGSQPSIVETRSIERRELPED LFTASYLSGPAPLAGWHNVQPQGMGMRYGMQFYPSAMPPSTLPFAPKSTNPFEASEGRGLIHAASFPTMASLNGAMPTAS PETGLMHVSSLGSLNTMVPLSTSYATPIPPQTPFASGAPTASGVYFDQDNGEQPRRSQRIDSFNRDITGFGSLDPIQQSS GEYVTSRTPNSFSNTKRNPFE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 128 | 128 | 6.6E-30 | ||
| PANTHER | 1 | 378 | 378 | 3.4E-213 | – | |
| PANTHER | 1 | 378 | 378 | 3.4E-213 | – | |
| SUPERFAMILY | 11 | 123 | 113 | 1.03E-31 | ||
| CDD | 12 | 122 | 111 | 3.45833E-64 | – | |
| SMART | 12 | 130 | 119 | 6.0E-18 | ||
| ProSiteProfiles | 12 | 123 | 112 | 16.803 | ||
| Pfam | 13 | 124 | 112 | 1.8E-26 | ||
| PRINTS | 24 | 43 | 20 | 1.1E-9 | ||
| PRINTS | 43 | 60 | 18 | 1.1E-9 | ||
| PRINTS | 61 | 82 | 22 | 1.1E-9 | ||
| MobiDBLite | 228 | 336 | 109 | - | – | |
| MobiDBLite | 228 | 346 | 119 | - | – | |
| MobiDBLite | 362 | 399 | 38 | - | – | |
| MobiDBLite | 362 | 378 | 17 | - | – | |
| PANTHER | 374 | 661 | 288 | 3.4E-213 | – | |
| PANTHER | 374 | 661 | 288 | 3.4E-213 | – | |
| MobiDBLite | 589 | 661 | 73 | - | – | |
| MobiDBLite | 631 | 661 | 31 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi5g1v0063400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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