Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0107100 |
Transcript ID | LotjaGi5g1v0107100.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | EEIG1/EHBP1 protein amino-terminal domain protein; TAIR: AT3G11760.1 structural maintenance of chromosomes flexible hinge domain protein; TrEMBL-Plants: tr|I1L9M1|I1L9M1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0107100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:20271529..20275140) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTGGTGAAGATGATGAAGAAGTGGAGGCCATGGCCTCCACTGGTATCTCGAAAGTACGAGGTCAAGCTTCTTGTGAG GACCCTCCAAGGCTGCGATCTGCTGCGGGAAGGTGCACGGGAAGGGATGTTCGCCGTCGAGATTCGCTGGAAGGGTCCTA AGCTTGCTCTCAGCTCCCTCCGCCGCAGCGCCGTCGCTAGAAACTTCACTAAGGAGGCTGCCGCTGGCTGCGACGGTGAC AACAACAATGATGTCGTTTTGTGGGATGAGGAGTTTCAGAGCTTCTGCACGCTTTCTGCTTACAAGGACAACAATAATGC CTTTCATCCTTGGGAGATCGCTTTCACTGTCTTCAATGTTTGTCTCTCTTTCTTGTTCAATTTGTTAAGACAATGTTGTA ATCTGTGAAAATTGAGTTTTTTTCATCTTGGGTATGATGAAATGTTTTCAATTTTTAGAAAAAAATGAAAACTTTATTTG TTTCAATTATTTCATGGATTTGGACAAAAATTCCCATCAATTGAACTTTGATGGGCTTTTCTAGATTCTGATTTCTTCAA ACAAATTTTGGAATTTTTCCCTTTTCAATTTTGGGGGTGGGGGGATTTTTTTATTTTTTTATAATTTTTTTTTCTGTTTA GGTTCTAGGGGTTAATTGTTGCTAAATTAGGTTTGAATTGTTGCTAAATTAGGTTTGAATTGGTTATCTGTTGCAGGGGT TGAATCAAAGGCCAAAAGTTCCTGTGATTGGAACTGCTTCTTTGAATCTAGCTGAGTTTGCATCTGTGATTGATCAAAAG GATTTTGACTTGAACATTCCACTCACAATCCCTGGAGGTTCTGCTGTTGAGCCTTCTCCTTCTCTCAGTGTATGTCCATA CATGATTTTTCATTCACTGTTCAATCTTTTCATGCCATCATGTTTGGATATTATAAACTGTTTCAATTGACACAGGAATA GTTCTTTTTTTACTCAAAATTTGACACTTCCCATTTGTTGTTTCTGTACTCATCAGAACTACTCTTGATTGTGCTCAGAT ATCAATTAGCTTAGTGGAGCTAAGAGCTGCTCAAGAGAGTTCAGAGCTAGTCCAAAAATCAGTGGTGCCTGTTGCATCAC CCCTGGCCCAGACAGGAGAAACTAACTTGGCAGAAAAAGATGAGGTTTCCACCATCAAAGCTGGTCTCAGGAAAGTGAAG ATTTTGACTGAGTTTGTATCAGCCAGGAAGGCCAGAAAATCAAGCCGTGAGGAAGAGGGAAGTGAAGGCAATTTGTCTGC CAGGAGTGAGGATGGTGAGTACAATTACCCCTTTGACTCTGACTCCCTTGATGATTTTGAGGAAGGGGAGTCAGATGAGG TGAAGGAGGATCCTAATGTTAGGAAATCATTCAGTTATGGGAAACTTGCCTATGCGAACGCTGAGGGGTCATTCTATTCC AGCATCAGGGTAAAGAGTGATGATGATGTTGATGAAGGCTGGGTTTACTACAGCAATCACATATCAGACACTGGGAGCTT GCCGGTAGAGGATTCAAGCTCAACTGTTTCCTCCTCCGAGCCTTATTTATCGCAAAGTTCGAAGCGCAGCATATTGCCTT GGAGGAAGAGGAAGTTGAGTTTCAGGTCTCCTAAATCCAAGGGAGAGCCATTGCTAAAGAAGGCCTATGGAGAAGAAGGT GGTGATGACATTGATTTTGATCGTAGGCAGCTTAGCTCTGATGAATCCCTTTCACCTGGGGTAAGACCTTACTTGTTATT TTTCATTGCTTTAATGATCTACATGTTTATGACACAAAAGAATAGGCTGTTGGGTGTCCTAAAAATTGATATTAAGGTCT TTGTGATTATTAATTACCTCATGACTAATGATCTGAGTGCATGCTGGTTAGCTTTGAGAGGAGTAAGTTTAGACATAATT TACCCAGGCGAAGTAAGTTTGGATATAATTGATTCTGGCAAAATTGGTTATGTGATAAGTGAGTTGAAAGTGATGTCATT TTTGTTTGGATATGTTTCTATAAAATTGATTTTTATAGGAAAATAATGGAAATGTCTTGTGAGGAACTAAAATCACTTTC ATGTTAACTAAAAAACTTAGTCTTTTTGCTTTGGCCTTAATGTGATTTGGTCTGCCATAAGTGCTTCTAAGAATTTCACT TAAATATGTTTTGATGATGAAAAACCACTTTAGAGAAGAATAAAAGTGCTTATGTGGATGACCAACACGAAACCAAACAT ATACTAAGGAATTAGTCACAGTAGCTTCCAAACCTTTTTGCTACTTTTGTTGCACTCTCATACTCTTGTTAATTAGCTTA TAAGTACTGATGTTTCACACTGTATGCCAATCGCAGAAAACTGAGGATGATTCATGTGCAAATCGAACATCAATATCTGA ATTTGGGGATGACAATTTTGCAGTAGGGAGCTGGGAGCAGAAAGAAGTAATGAGCCGTGATGGCCACATGAAACTTCAGG CCCAGGTTTTCTTTGCCTCAATTGATCAGCGCAGCGAACGCGCAGCCGGTGAGAGTGCATGTACAGCTCTGGTTGCTGTA ATTGCTGATTGGTTCCAAAACAACCATGATCTTATGCCCATAAAGTCCCAATTTGATAGTCTAATTCGAGAAGGCTCATT AGAATGGAGGAACTTATGTGAAAACCAGACATACATGGAGCGATTCCCCGACAAGCATTTTGATCTCGAGACAGTCATTC AAGCCAAAACACGCCCCCTTTCTGTGGTTCCTGGGAAGTCTTTCATTGGTTTTTTTCATCCAGAAGGAATGGATGAGGGT AGATTTGATTTCTTGCACGGGGCCATGTCTTTTGATAACATTTGGGATGAGATTAGTCATAATGCTGGGCATGATTGCAC CTACAATGGTGAACCCCAGGTTTATATTATTAGTTGGAATGACCATTTCTTCATCCTTAAAGTTGAAGTTGATGCTTACT ACATCATTGACACTTTGGGGGAGAGGCTTTATGAAGGATGCAATCAGGCATACATCTTGAAATTTGACAGCAACACATTG ATACACAAAATGCCAGAAGTTGCACAATCATCAGATGAGAAAACAATTACTGACCAACAACAAACTGTTGCAGATGTATT AGAGAACAATGACAAGCAGATCCAGCAAGTTAATGCCAAGGAGGCTGATTCTGTTGCGGCGGAGACCAAAGAAGAACGGT TGAAAAGTGAGCAGGAAGAGGAGGTTGTGTGCAGAGGGAAGGACGCATGCAAAGAGTATATCAAGAGTTTCTTGGCAGCA ATTCCCATCAGAGAATTGCAAGCAGATGTCAAAAAAGGTCTAGTATCATCAACTCCACTTCATCATAGGCTACAAATTGA GTTTCACTATACTCAGTTGTTGCAGTCTTATGATATAGTTCCAGTGGCTGAAGCATCCATGACTGTGCCAGAGACTCTAG CTCTTGCAGTAACTGAGGTTTTGACATAATTGTACTGCTAATTAAAGAAAGTGCAGTTACTCTAACTAGTCTTACTTCGT ATTTTTGTAAGTGTGTTTTCTGATTTTGATGTGAAATTAACGAAACTTAGAGGCTCATTTGAGCTTTTGATGATGCTAAA TGAGTGAGTTGA
CDS sequence (LotjaGi5g1v0107100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGTGAAGATGATGAAGAAGTGGAGGCCATGGCCTCCACTGGTATCTCGAAAGTACGAGGTCAAGCTTCTTGTGAG GACCCTCCAAGGCTGCGATCTGCTGCGGGAAGGTGCACGGGAAGGGATGTTCGCCGTCGAGATTCGCTGGAAGGGTCCTA AGCTTGCTCTCAGCTCCCTCCGCCGCAGCGCCGTCGCTAGAAACTTCACTAAGGAGGCTGCCGCTGGCTGCGACGGTGAC AACAACAATGATGTCGTTTTGTGGGATGAGGAGTTTCAGAGCTTCTGCACGCTTTCTGCTTACAAGGACAACAATAATGC CTTTCATCCTTGGGAGATCGCTTTCACTGTCTTCAATGGGTTGAATCAAAGGCCAAAAGTTCCTGTGATTGGAACTGCTT CTTTGAATCTAGCTGAGTTTGCATCTGTGATTGATCAAAAGGATTTTGACTTGAACATTCCACTCACAATCCCTGGAGGT TCTGCTGTTGAGCCTTCTCCTTCTCTCAGTATATCAATTAGCTTAGTGGAGCTAAGAGCTGCTCAAGAGAGTTCAGAGCT AGTCCAAAAATCAGTGGTGCCTGTTGCATCACCCCTGGCCCAGACAGGAGAAACTAACTTGGCAGAAAAAGATGAGGTTT CCACCATCAAAGCTGGTCTCAGGAAAGTGAAGATTTTGACTGAGTTTGTATCAGCCAGGAAGGCCAGAAAATCAAGCCGT GAGGAAGAGGGAAGTGAAGGCAATTTGTCTGCCAGGAGTGAGGATGGTGAGTACAATTACCCCTTTGACTCTGACTCCCT TGATGATTTTGAGGAAGGGGAGTCAGATGAGGTGAAGGAGGATCCTAATGTTAGGAAATCATTCAGTTATGGGAAACTTG CCTATGCGAACGCTGAGGGGTCATTCTATTCCAGCATCAGGGTAAAGAGTGATGATGATGTTGATGAAGGCTGGGTTTAC TACAGCAATCACATATCAGACACTGGGAGCTTGCCGGTAGAGGATTCAAGCTCAACTGTTTCCTCCTCCGAGCCTTATTT ATCGCAAAGTTCGAAGCGCAGCATATTGCCTTGGAGGAAGAGGAAGTTGAGTTTCAGGTCTCCTAAATCCAAGGGAGAGC CATTGCTAAAGAAGGCCTATGGAGAAGAAGGTGGTGATGACATTGATTTTGATCGTAGGCAGCTTAGCTCTGATGAATCC CTTTCACCTGGGAAAACTGAGGATGATTCATGTGCAAATCGAACATCAATATCTGAATTTGGGGATGACAATTTTGCAGT AGGGAGCTGGGAGCAGAAAGAAGTAATGAGCCGTGATGGCCACATGAAACTTCAGGCCCAGGTTTTCTTTGCCTCAATTG ATCAGCGCAGCGAACGCGCAGCCGGTGAGAGTGCATGTACAGCTCTGGTTGCTGTAATTGCTGATTGGTTCCAAAACAAC CATGATCTTATGCCCATAAAGTCCCAATTTGATAGTCTAATTCGAGAAGGCTCATTAGAATGGAGGAACTTATGTGAAAA CCAGACATACATGGAGCGATTCCCCGACAAGCATTTTGATCTCGAGACAGTCATTCAAGCCAAAACACGCCCCCTTTCTG TGGTTCCTGGGAAGTCTTTCATTGGTTTTTTTCATCCAGAAGGAATGGATGAGGGTAGATTTGATTTCTTGCACGGGGCC ATGTCTTTTGATAACATTTGGGATGAGATTAGTCATAATGCTGGGCATGATTGCACCTACAATGGTGAACCCCAGGTTTA TATTATTAGTTGGAATGACCATTTCTTCATCCTTAAAGTTGAAGTTGATGCTTACTACATCATTGACACTTTGGGGGAGA GGCTTTATGAAGGATGCAATCAGGCATACATCTTGAAATTTGACAGCAACACATTGATACACAAAATGCCAGAAGTTGCA CAATCATCAGATGAGAAAACAATTACTGACCAACAACAAACTGTTGCAGATGTATTAGAGAACAATGACAAGCAGATCCA GCAAGTTAATGCCAAGGAGGCTGATTCTGTTGCGGCGGAGACCAAAGAAGAACGGTTGAAAAGTGAGCAGGAAGAGGAGG TTGTGTGCAGAGGGAAGGACGCATGCAAAGAGTATATCAAGAGTTTCTTGGCAGCAATTCCCATCAGAGAATTGCAAGCA GATGTCAAAAAAGGTCTAGTATCATCAACTCCACTTCATCATAGGCTACAAATTGAGTTTCACTATACTCAGTTGTTGCA GTCTTATGATATAGTTCCAGTGGCTGAAGCATCCATGACTGTGCCAGAGACTCTAGCTCTTGCAAGGCTCATTTGA
Protein sequence (LotjaGi5g1v0107100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVVKMMKKWRPWPPLVSRKYEVKLLVRTLQGCDLLREGAREGMFAVEIRWKGPKLALSSLRRSAVARNFTKEAAAGCDGD NNNDVVLWDEEFQSFCTLSAYKDNNNAFHPWEIAFTVFNGLNQRPKVPVIGTASLNLAEFASVIDQKDFDLNIPLTIPGG SAVEPSPSLSISISLVELRAAQESSELVQKSVVPVASPLAQTGETNLAEKDEVSTIKAGLRKVKILTEFVSARKARKSSR EEEGSEGNLSARSEDGEYNYPFDSDSLDDFEEGESDEVKEDPNVRKSFSYGKLAYANAEGSFYSSIRVKSDDDVDEGWVY YSNHISDTGSLPVEDSSSTVSSSEPYLSQSSKRSILPWRKRKLSFRSPKSKGEPLLKKAYGEEGGDDIDFDRRQLSSDES LSPGKTEDDSCANRTSISEFGDDNFAVGSWEQKEVMSRDGHMKLQAQVFFASIDQRSERAAGESACTALVAVIADWFQNN HDLMPIKSQFDSLIREGSLEWRNLCENQTYMERFPDKHFDLETVIQAKTRPLSVVPGKSFIGFFHPEGMDEGRFDFLHGA MSFDNIWDEISHNAGHDCTYNGEPQVYIISWNDHFFILKVEVDAYYIIDTLGERLYEGCNQAYILKFDSNTLIHKMPEVA QSSDEKTITDQQQTVADVLENNDKQIQQVNAKEADSVAAETKEERLKSEQEEEVVCRGKDACKEYIKSFLAAIPIRELQA DVKKGLVSSTPLHHRLQIEFHYTQLLQSYDIVPVAEASMTVPETLALARLI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 758 | 758 | 0.0 | – | |
PANTHER | 1 | 758 | 758 | 0.0 | – | |
ProSiteProfiles | 10 | 177 | 168 | 22.261 | ||
Pfam | 80 | 179 | 100 | 2.4E-10 | ||
MobiDBLite | 236 | 283 | 48 | - | – | |
MobiDBLite | 236 | 250 | 15 | - | – | |
MobiDBLite | 261 | 277 | 17 | - | – | |
MobiDBLite | 366 | 414 | 49 | - | – | |
MobiDBLite | 367 | 405 | 39 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0107100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…