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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0141300 |
Transcript ID | LotjaGi5g1v0141300.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Emsy N terminus domain-containing family protein; TAIR: AT5G13020.1 Emsy N Terminus (ENT)/ plant Tudor-like domains-containing protein; Swiss-Prot: sp|F4K2F0|EML3_ARATH Protein EMSY-LIKE 3; TrEMBL-Plants: tr|A0A151SGK0|A0A151SGK0_CAJCA Uncharacterized protein; Found in the gene: LotjaGi5g1v0141300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:34839725..34846953) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAGGTTCAAATTCATCTACTTGAGCAGGAAGCATACTCTGCTGTATTGCGTGCTTTCAAAGCTCAGTCTGATGCTCT TACTTGGGTATCTTCTTTAGTTTCCTCCGTTTCTTCTATATTATCTTTGTATTCTCCTGCAATGAAGATTTACCTTGTCT ATTTTACTTACGTATTTATCAGGAGAAGGAAGGTGTGATCACTGAGCTTAGAAGAGAATTGAGGGTTTCAGATGATGAAC ACAGGGAACTTCTTTCCAGGGTTAATGCTGATGAAATAATTCACCGAATAAGGTATTGTAATTCTTTGAGTAGTTGTACT TGTAACAAGAAAAACATATTGACAGTTTTTCTGCTTCTACTTTTACCACGTTATATGATGGATGATGCATTCAGGGAATG GAGACAAACTGATTGTTACCAACCTGCAAGGCGCACTACATCTCAACCTGTTCATGACATTTTACCTAGTCCAACTGTTT CAGCATCTCGCAAAAAGCAGAAGACTACCCATTCGGTACGCCATCTTTTCTTGTATGTTATGTGATTTGGACTTTAACAG CATTATTAGTATATTCATATTTACTGCTTCAAATGTAAGCGGTGCTTTCCGATCCAATGCTGAAAGCGTAATTGCATTGC ACTTAAATTCTTTACTTGAAAAGTAAATTATTGACGTCCAATTTTTTTGCTGCCAATTTTGGTGCCAGGGTCAGTCATTG CCTGGTTTGTCTTCAGTGAAGTCTATGCAGTATGCTTCTACGGCACCAACTGGAGGTAGGCATTTCATGAATCGCAGTTC TTCTGGTGCTCTTGCATCTAATGCAACTGCTGATGCAGCTGCTTTTGATCCATTGGTCGGGAAGAAGGTTTGGACGAGAT GGCCTGAAGACAATCACTTTTACGAGGCTGTCATAACTGATTACAACGCTGCTGAGGTATGTGTATTAGGAACTGTCAAA TCTAGGTAGAATCATGATTTGACAACGCTGATGCGGATAAGTCTTACTTTTACCCCCACATGTAAGACCCTTTTTTTGTT TTCTTTCCCAGAAGGGGGGGGGGGAGCATAGAGACACCTTAAACTTAATTGCCTTTTGCAAATAGACACCTTCAAGTTTA AACCTATTGTTATAGTAGATCCTTCTGTCAATTTAAAAGTTAACATGTATATTAATAGTGAACAAACTTACTTTTTTCTT CCTTATCTACTCTGAACTTATCATTTACTTTTTTTTATTTTAAAAATCATATTATTTGATGATTTGTTCACCATTATGAG TTGTCCCCAAGTTAATAAAAGTATTGTAATGATAAATAAAGTTTAAGGATTAATTGGGATTAAAAGCTGAAGGTGTTTAT TAGCTAAAGGCTTAAAGTTAAGGTGGCTCTGTACAGTTCCACTTTTCTGGGGGTTTCTTTTCCCCTTGTACAGTTTACAG TAAATGGAAAAGTGTGCAGACTTATTTGCATTTATTTCATCTAGTATAGGATATGTCTTCAATGTCAGTAACCTCTTCAA ATATACATAAAACTCACTCCCTTCCAAAATCCATATAGAAATAACAATGCTTAAAGCATTGAATAACAGTTGATAACTTT TCAGAGTTTCTTTTTTAAATTTCGTTTTGTTGTTTGCTTCTTTGCAGGGCCGGCACGCATTGGTTTATGATATTAATAAA GCAAATGAGACTTGGGAATGGGTTGATCTCAAAGAGGTATTTATTCCCTATGATTTGCTTCATATCAGATTAGAGTAATG TAAAATATTTGAGTTCTTTAACTTTAGGAAGCTAAGGGCTTTTAGGAGAAAAAAATATCCTGATTCAGGGAATAAATTAC TACTAAAAAATCATAGGGAATGAAACATCCTGACTCAACATCAGATTAGAGTCATGTAAAATATTTGTTCTTTAATTTTA GGAAGCATGGAGCTTTTAGGAGAAAAAAACTGTGATGAGGAATTTTGATAATTGAGAAGGATTTCGAACATTATTATATT TCATAATCTCTTTTTGAATTTGGGTTAGGCTTAATCTATCCCAAAATCTAGCTTAGAACTCTACCATTTATAAGGAATCT TCTGGCAGTATCTCTAGTCAATGTGAGACTTCTAAACTGGGCATCTGGAGCATTAAATTTACATGAATGAAAAGCATCTG CGGGTGGCCATACTTGAATTTGTTGAAATAATTATTGTGTATATTTCATTGATTAATACTTGACTAAAAACTACAATATA TATAGACTAACAAAGAGATAAAAAGAAACTAAATCTATCTAAACCTATCTCTAATTAAATAGATATCATCTCTATTTAAA TAAATACTAATCTAAAATAGATAAACAAATCTTAACTATATCTCTATGAGATAAGACTAATAATAAACTAAATCTTAACA GATATTCAACACTCCCCCTCAAGCTAAAGCTTACTTAGCTTTAAGCTTGTAACAAATCTAACCCAAGAAGAAAATTATCT TAATAGATATCCCTTAATAATGACGGTCTTCGCGAATCTCTGAATTGACCTTTCAAACTTCTAGTAAATCCATGGGCCGA CAAAAGACAACTTCTCATACTTGATCTGGTTAAAATTGATGCAAGACAAAAACCAATTCCTCTAGAGTGTCGTAGGGTAG CTGAGCCAGCAAACAAGGGCGAAAAACCAGCAACAATACGCCCGAAAACAAAACAAGGCTGAAGCAACAACTCACCAACA ACAACCACACAGAAATAAAACATACTTGAGGTCGATCGATTGATGGGTTCTAAGACAAACAATGGTGTCAACTTTGACAC AGACAACTCTCAAACGCCGCTGGTTCGGTGGAGGTTGTATCCAAGAATGATGCTTATATGGTGATTGTTTAATAGCAGCG TGTTTTGGAGTATCCAACAATCTGAATCAGATTGTTGTGTTCCTTTGCTTTCCTATTTCTCCATAATCCAGTTTGTGCTA ATGTTTTTGGGAGAGGCAGAAGCGTCAGGTTGAATCTAATTGTATTGATCCGCTGCATTGTTCTCGCTGGTCCTATTTGT GTTTCAGCCTCGCTGAAGCCCTAAAACCAGAAAACCAAACAATCGAGACAAAACAAACAAGGTGACACTGTCACCTTCAA AACCAAATTGCATAAAGTTAGGATCAATGTAATAAGAGCATCTCGAACCGTGAGACGCAAACTAAGATCTCAAACAGCTA GAAACATCGCAGATGAGAAAACACACCCACGAACCAAACTGGAAGAGGAAGACCGGACGACCATTAACGGTGGCGCTACA ACACACATCACCTTAAAAACCAAACCTGGCTGAAACACAAATAGGACCAGCGAGAACAATGTAGTAGCTTCAAGTCTCTA CAATTTCTGATTACTGCATTGCATGCAGTAGCTTCTCTTCTCGAGTTAATCATATTTGTTACAAGCTAGCTTGAGGGGAA GATCTGGATATTGTTAAATATCTCAATAGAGACTACGGTCAGCCATCGCTTTCCTCTGCACGTTTAATGATATCATTGTT GTCTCCACGAAAATATTCCTCCCTCGCCATGTGAACAAAAAAGAGAGTAGCCAACCAAAGGATGCCCGAATCCAAGGATA AACAGGTAGCGCTATAAATGCGATTACTTTGATAGTAATTAAGGTAACCAATATTGTTGGGCACAATTGAAGGATTATTA CGTACTTGATAGACAAATCAAACAATCAAAAATTGTAGTTCCTCTCTTCCATCGCAGCCACTTCACTATGGCTTTCACCA TCAAACAAATGGCCCTGATTATTTTGCTTTTTACTATATTGTCTTTCTTATTCGGATTTGCAGTTTCCGTCAAGAAGGGT CTATATGGTGATCCTAGAGCGGTATATTATTCAACATCAGCTATATTGGTATATCTTAGTGTTGCTTCTCTTCTTGCCTC AAGTGTGGCTGGATTTCTTTCTCTGGTTTACCCTTACAAGGGAATGTCTGTTCTGCTAAAGGTTTTGTTTGATGACATGA ACACAGGCCTCGTGGTCTTACTTCGCGCGTTTTCAACTGCAGTGTCTGCAGTGTTGTTATTGATACCAACAATAGTGGAA CTTTTGATTTGTCTATCAAGTACGTAATAATCCTTCAATTGTGCCCAACAATATTGGTTACCTTAATTACTATCAAAGTA ATCGCATTTATAGCGCTACCTGTTTATCCTTGGATTCGGGCATCCTTTGGTTGGCTACTCTTTTTTGTTCACATGGCGAG GGAGGAATATTTCCGTGGAGACAACAATGATATCATTAAACGTGCAGAGTAAAGCGATGGCTGACCGTAGTCTCTATTGA GATATTTAACAATATCCAGATCTTCCCCTCAAGCTAGCTTGTAACAAATATGATTAACTCGAGAAGAGAAGCTACTGTAT GCAATGCGGTAATCAGAAATTGTAGAGACTTGAAATTGCCCTTCACCGCTTACTCTGGTCGAATGCTTCATCAATGTGAA CACATGAATTATGGAAAACTGATTTTGAGAAACCACGACAGATGTAAGGATCTTTTTGTGGTTTCCATACCGAAAATTCA GCATCTGAAATCACATTCCAGCCCAACAAACAAGGACAACAACCAGGGGTGTGATGAATCAATAATTCATAAAACCCACA GAATATATGAATTGATGATCATGCAAGGCTCCATTGACATTCCACTTTATTTAATCAATACTGTTGCTGGCAGTGAAGAA TTATTATGTTATTCCAATCAAGAATTCTTGAATCAACAATTGTTGAATCAATTCCGACCACAGATTCTGAGTATTCACTA ATCAATGAGACTCGCACACTCAAGGAACAACCTTGCTCAAGATACAGGCGGCGACACTTCAGGGAAAAGTTGGAGGTGCC TCCGATCCGTTCTGAGCAACTTCGGAAAACGGCGGTGGAGGAACTTTGACAGTGGTTGAACGTCAATGGTGATGGCCAAG AACGTGACAAGGATCACTAGTTCTAGTCGTAAGAAAACGGCTAGAACTAACAAGCTGAAGCAAAGTACAAGGAAAATTAA ATCCAAAGAGATTTGGAAAGCCCCCGTGAAGGGGCTCACGGGGGAGGAGCCCCCTCACAGCGGTAGGATTGAAACTCGCT CTGATACCAACTTGAATTTGATGAAATAATTATTGTGTATATTTCATTGATTAATTCTTGACTAAAAACTACAATATATA TAGACTAACAAAGAGATAAAAAGAAACTAAATCTATCTAAACCTATCTCTAATTAAATAGATATCATCTCTATTTAATAG ATACTAATCTAAAATAGAAAAACAAATCTTAACTATATCTCTATGAGATAAGACTAATAATAAACAAAATCTTAACAGAT ATTCAACAGCCATATATGGGTGGAACGAGGGTAGGCTCTGATACGATATTTGAACTTAGGTTAGACTTAACTCTACCTCT AAAGCTAAATCTTAGAGGTTAGGGTTGCTCTGCTCTTTACAAGGATTATTCTGGCCACATCTCTAATCAATGTAGGACTT CTAAACAATCTCAATATAGGCTAAGATTTAAGTTTTTTAAGCAAAAATTATTATAAGAACTCCTATGATTTAGTTGTACA AGATCACTCTTCACTTGGCTTTTGGATTGAATTCAGGAATAGTTGAACCCAAACTGATGTTAATTTTAAAACTTGCAATG TTTTTAGGATATTTAGAGTCTCTGGACTTATAATTTATGTGCAGTTTCCTATTTGATCATAATCAAGTTGAACCAAGGAC CAAAAATCTTTTAATCTCTTCGGTTTTGGAGCCTGTTTGTTTTATGACTATTTCACATTATTAGTCATGAGTTAGTTTCA CTTAGAAATAGAATTTTGGGAGTTCAATGTGAGTGCTTCCAATTTCCTTTCCTATTCACCACGATTCTTAGAATTTATTG TGATAGTAAGTACTCTGGAAGTAAAAATTGGAAACAACAACCACAACTCTCAGAGTTCAAGTACCTGAGATTTATTATAC AAAATACTGGGGAAATTGAAATTGAATTTGTAAAAGATGTTACAACATGTTTAGGGAAAATAAGCATAAATGTTCTCTTT ATGTAATTTCTTTTCATGTGCTTTAACCTTCGTAGGCTCTGAATATGTTAGCTCAGTGTATGTTACTATGCAACAAGTTT CTGGTGTACATAAGATAAAAATGAACTCAAATGGTTTGACTATTTCGATGACTTAGTAGATATATGAATTTGTCCAAAAT CATCTTTTATTTTTAAAGATGTTTAATCCTTGTTAAATGCAGATTTCACCTGAGGATATACGATGGGAAGGTGAAGATCC CGGCATAGTCCATAGAATTGGACATAGTGGGCAAGGTCGTGGAGCTAAGAAATTCTTTAGCCGTAGCGGTGATACTTTGG GTGCTGGAAGAGGAAGAGGACATCCCAGATTTCAGGCCAGAAAAGAACTTCACCCTCCTCAAAATAATGGTATTGGAGAG AGAGTATCCGATGACATTGAGTTGATGAACACAGATACACTTGTTAAGGAGGTAGTAGATATCACATGCCTATGCAACCT CATTGAGAAAGAGAAAAACAGGGAAATTTTCAGTCTTTAATAACATTGATGTTATAACAGGTGGAGAGGGTTTTTGCAAC GAGTCCTCCAGATTCTATGGAGCTTGAGAAGGCAAAGCAAATGCTGAAAGTACGATGACTAACCATCATGAAGTTCTGTA TTTTTGGATTTGGCTCCTCTACAACCATTAATTTTGAAGTCAATGGTTGTGATTGTGATCATATACTTCCCTTGTTTAAC AAATTATGACATTCTTTAAATCTCAAACATTGATTTCTCAATCAATGGTGGTAATGACTCAGTGAGGAGCCAAATCCGTA TTTTGAACCTTCATCCTCTATGCTTCTTGTTTATTCGCTAATTATCGCTTGTATTGTTTGTGTAGGAGCATGAGCAGGCG CTTCTTGATGCAATTGCAAGGATTGCAGATGCATCGGATGGTGAAAGTGGTAATCATTAGTTTAGACGTCTACATTATCT TGCTGCATACTATTGTATATTCAAACTCATATTTTTCCCGTTTAGGATATAGGTAACAAAAAGTGCTTTTATGTAATTGA ATAAAAAACATAATTTTGTTATGATATCGCCACAACAATAGATTTTAGCAACTCTCTAACTAAAGAAAAGACTTTTGCTT TTCGGGTCAGAGCAGTGGAAGAAGCATGA
CDS sequence (LotjaGi5g1v0141300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGTTCAAATTCATCTACTTGAGCAGGAAGCATACTCTGCTGTATTGCGTGCTTTCAAAGCTCAGTCTGATGCTCT TACTTGGGAGAAGGAAGGTGTGATCACTGAGCTTAGAAGAGAATTGAGGGTTTCAGATGATGAACACAGGGAACTTCTTT CCAGGGTTAATGCTGATGAAATAATTCACCGAATAAGGGAATGGAGACAAACTGATTGTTACCAACCTGCAAGGCGCACT ACATCTCAACCTGTTCATGACATTTTACCTAGTCCAACTGTTTCAGCATCTCGCAAAAAGCAGAAGACTACCCATTCGGG TCAGTCATTGCCTGGTTTGTCTTCAGTGAAGTCTATGCAGTATGCTTCTACGGCACCAACTGGAGGTAGGCATTTCATGA ATCGCAGTTCTTCTGGTGCTCTTGCATCTAATGCAACTGCTGATGCAGCTGCTTTTGATCCATTGGTCGGGAAGAAGGTT TGGACGAGATGGCCTGAAGACAATCACTTTTACGAGGCTGTCATAACTGATTACAACGCTGCTGAGATTTCACCTGAGGA TATACGATGGGAAGGTGAAGATCCCGGCATAGTCCATAGAATTGGACATAGTGGGCAAGGTCGTGGAGCTAAGAAATTCT TTAGCCGTAGCGGTGATACTTTGGGTGCTGGAAGAGGAAGAGGACATCCCAGATTTCAGGCCAGAAAAGAACTTCACCCT CCTCAAAATAATGGTATTGGAGAGAGAGTATCCGATGACATTGAGTTGATGAACACAGATACACTTGTTAAGGAGGTGGA GAGGGTTTTTGCAACGAGTCCTCCAGATTCTATGGAGCTTGAGAAGGCAAAGCAAATGCTGAAAGAGCATGAGCAGGCGC TTCTTGATGCAATTGCAAGGATTGCAGATGCATCGGATGGTGAAAGTGCTAAAGAAAAGACTTTTGCTTTTCGGGTCAGA GCAGTGGAAGAAGCATGA
Protein sequence (LotjaGi5g1v0141300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVQIHLLEQEAYSAVLRAFKAQSDALTWEKEGVITELRRELRVSDDEHRELLSRVNADEIIHRIREWRQTDCYQPARRT TSQPVHDILPSPTVSASRKKQKTTHSGQSLPGLSSVKSMQYASTAPTGGRHFMNRSSSGALASNATADAAAFDPLVGKKV WTRWPEDNHFYEAVITDYNAAEISPEDIRWEGEDPGIVHRIGHSGQGRGAKKFFSRSGDTLGAGRGRGHPRFQARKELHP PQNNGIGERVSDDIELMNTDTLVKEVERVFATSPPDSMELEKAKQMLKEHEQALLDAIARIADASDGESAKEKTFAFRVR AVEEA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 182 | 182 | 2.0E-164 | – | |
Gene3D | 1 | 129 | 129 | 2.2E-14 | ||
PANTHER | 1 | 182 | 182 | 2.0E-164 | ||
ProSiteProfiles | 1 | 88 | 88 | 23.008 | ||
SMART | 1 | 74 | 74 | 1.4E-36 | ||
SUPERFAMILY | 1 | 109 | 109 | 7.19E-36 | ||
Pfam | 3 | 70 | 68 | 4.6E-27 | ||
Coils | 35 | 55 | 21 | - | – | |
MobiDBLite | 76 | 136 | 61 | - | – | |
SUPERFAMILY | 154 | 178 | 25 | 1.65E-5 | – | |
PANTHER | 182 | 315 | 134 | 2.0E-164 | – | |
PANTHER | 182 | 315 | 134 | 2.0E-164 | ||
Coils | 280 | 300 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Defense response to fungus | Reactions triggered in response to the presence of a fungus that act to protect the cell or organism. |
Expression pattern of LotjaGi5g1v0141300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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