Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0179500 |
| Transcript ID | LotjaGi5g1v0179500.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; TAIR: AT5G24530.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; Swiss-Prot: sp|P24397|HY6H_HYONI Hyoscyamine 6-dioxygenase; TrEMBL-Plants: tr|W9S991|W9S991_9ROSA Hyoscyamine 6-dioxygenase; Found in the gene: LotjaGi5g1v0179500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:45711220..45713847) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTGGTAATTGGTACCATTGCCTAAAATCACTAAGGGCACCTATAATCAACACACATGGAAAAGCTCATATCTAGCAG ATGCAACAACTTGCAATATGTTCCAGAGTCTTACATTCTGCCACCAGAAAGCAGGCCTGAGAAAGAAGCTCCTCTCTGCA ACATGGTGCCTGTAATTGACCTTGGAGGAGGTGAATTGGATTCTGATGCTTCAACCATATCTCAGCAAATTATAAAGGCT AGCCAAGAATTTGGATTCTTTCAGGTTCCATCTTTTACTTCCCCAATCCCTATTGAATATGATTGGTTGAAACTTAAAAA TCACTTAAAAATCAACTTAGTTGTTAGTTGGCTTAATTGCAACTTTGGTACCTGACGTTTACCAATTTCACAATTTTAGT CCCCCACCTAATTTAATTACACAGATGGTCCCTGACTTTGCTGGCAGTCTGCAACGTTGGTCCTACCGTTTGTTTGTTAA TGGAGGAGGTTTACGTGGATGGTCACTTAGTTGATGTGGAAGTTGAATTGGAGAGAGAAAGAGACCAGCAACTGATTCAA CCTTCTTGCTCGTCTCTAGGGACTCGTTCGTTCTTTATCTCTTCCCTCTTCGCTAAATCCCAAGCTTCGAAACATCTTCC TCACGGTGCTCTGTTTTTCAAGGAGGAAGAGGGTAAAAGATGACCGTTGCAGGTCTCACGTGCAAGTCACGTGCTTCCCT CTCTCTTCAGTCCTTCTTTCTCTCTCCAATTGGACATCCATGTAAGCCTTCTCCGTTAACAAATAAACGGTAGGACCAAC ATTGCAGACGGGCAGCAAAATCAGGGACCATCCGTGTAATTAAATTAGGTGGGAGACTAAAATTGTGGAATTGGTAAACG TCAGGGACCAAAGTTGCAATTAAGCCTTGTTAGTTATTCTTGTCCCTTTGATTGTTAGTGTTGAATAAGAATCGTTGAAA ATCAACTAATAGTGTGTTTGGATCGGTGGTGGAACACAATCCAAAGCGCGATAACTCTAGAATCTACACTTTGTAGCTTC TCCCCGAAGCTGAGTATGAGGCATTCCACCGCAGAACCAAACACGCTACATGTAAATTGTTAGTTATTTCAGTCCCAAAT TGGTTAGCATGAACTTACCTTTTGTTTGATAATTGACCAAATGTCAATTTTTTCAAATACTCATAAGTTGAGAACAATAT GCAGTTGGTTAATCATGGCATTCCCATAATGCTACTAGACGATGTAATGCAAGTAGCCAGGGAGTTCCATGAGCTCCCTA TAAAGGAGAAGGCAAGTTTATACTCAGAGGACCCTAAACAAAGTTGTAGATTATATACAAGCATTGACTATGCTACTGAG GATGTACACTACTGGAGAGATACTCTAAGGCATCACAGTCATCCTCTACAAGAACACATCCAAAATTGGCCTCATAAGCC AACTCAATATCGGTACGTACAAGATCATGTAATAGTTCCATAAATTTTCAGTATTTTATTGCAGTGCAGAAACTTTTATG TGTGTACAACTTGATTCTAGCAAAAATGAATCGAGAGAATAAGAGCAAAAAAATGTCTCAGGATATGTTATTTTCCCATT TTCATACTTTTTAACAGTGAACTAAAGTGACTCTAACTAGTTGCTTGGCAGGGATGTGATGGGGAGCTATTCAGTGAAGG TGAGGAAGCTCTGTTTGATTCTTTTGGATCTGATTTACACAGGACTAGGACTTGATTCAGGATATTTCAACAATGAACTT ACCAGTGTTCAGTTGATGGCTATAAACCATTACCCACCGTGTCCAGACCCAAGTTTAACTTTGGGGTTGCCTAAACATAG TGATGTTAACCTCATAACAATCCTTTTTCAAGGTGACAAGAATGGGTTGCAAATCTTGAAGAATGGACATTGGTTTGAGC TTGAACCACTTCCCAATGCATTAGTGGTTAATGTAGGCCATATTTTACAGGTCTATCACCTCTATCTAAACTCAAATCAA CCTTTTATACTTTCTAATCCTGGTTTAGAATCAGTTTAGTTTACCGTTAGAAAGTATGAAAAAGGAAAATAAAACATCTC AACTTACTGATTCATTTATTGATTATAGATTATCAGCAACGGGAAGTTAAAGCGCCGATCACAGGGTGGTGACAAACAAA AGAGTTGCGCGAACAACAATCGGTTGCTTCATCCATCCCTCTCAGGATTGCCATATTGAGCCAGCAAAAGCACTTGTTGA TGATGATAAGAATCCCCCTTTGTACAAGTCTTTTGAATACAAAAGCTTCATTAGTAGCTATATAGCAGATACTCATGCCA GATTGCCACCACTCGAGCGATACAAGCTAAAGTAACATCTTTGTGTTTAAGATGCTTACACAAATTGAAAGGTGTAGGTT GGTTCAATAAAAGAAATAAGTAGGCTAAATTATCACTGTTGTTTTGTTCAATCATTAAACTTTTGCATTCAGCAACAACA CTAGCTTTCTTTTTGGATTGCCAAAATTAAATGAATTTCACTTTTGAGATCATTGCTATGGGTAAAGATGTAAACCCCAC TTCTCAAAGCTAGTAAATAAGTAAACACACCTAAATCAAAATGCCTATCTTTTACTGCTAGTTCTTGC
CDS sequence (LotjaGi5g1v0179500.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAGCTCATATCTAGCAGATGCAACAACTTGCAATATGTTCCAGAGTCTTACATTCTGCCACCAGAAAGCAGGCC TGAGAAAGAAGCTCCTCTCTGCAACATGGTGCCTGTAATTGACCTTGGAGGAGGTGAATTGGATTCTGATGCTTCAACCA TATCTCAGCAAATTATAAAGGCTAGCCAAGAATTTGGATTCTTTCAGTTGGTTAATCATGGCATTCCCATAATGCTACTA GACGATGTAATGCAAGTAGCCAGGGAGTTCCATGAGCTCCCTATAAAGGAGAAGGCAAGTTTATACTCAGAGGACCCTAA ACAAAGTTGTAGATTATATACAAGCATTGACTATGCTACTGAGGATGTACACTACTGGAGAGATACTCTAAGGCATCACA GTCATCCTCTACAAGAACACATCCAAAATTGGCCTCATAAGCCAACTCAATATCGGGATGTGATGGGGAGCTATTCAGTG AAGGTGAGGAAGCTCTGTTTGATTCTTTTGGATCTGATTTACACAGGACTAGGACTTGATTCAGGATATTTCAACAATGA ACTTACCAGTGTTCAGTTGATGGCTATAAACCATTACCCACCGTGTCCAGACCCAAGTTTAACTTTGGGGTTGCCTAAAC ATAGTGATGTTAACCTCATAACAATCCTTTTTCAAGGTGACAAGAATGGGTTGCAAATCTTGAAGAATGGACATTGGTTT GAGCTTGAACCACTTCCCAATGCATTAGTGGTTAATGTAGGCCATATTTTACAGATTATCAGCAACGGGAAGTTAAAGCG CCGATCACAGGGTGGTGACAAACAAAAGAGTTGCGCGAACAACAATCGGTTGCTTCATCCATCCCTCTCAGGATTGCCAT ATTGA
Protein sequence (LotjaGi5g1v0179500.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKLISSRCNNLQYVPESYILPPESRPEKEAPLCNMVPVIDLGGGELDSDASTISQQIIKASQEFGFFQLVNHGIPIMLL DDVMQVAREFHELPIKEKASLYSEDPKQSCRLYTSIDYATEDVHYWRDTLRHHSHPLQEHIQNWPHKPTQYRDVMGSYSV KVRKLCLILLDLIYTGLGLDSGYFNNELTSVQLMAINHYPPCPDPSLTLGLPKHSDVNLITILFQGDKNGLQILKNGHWF ELEPLPNALVVNVGHILQIISNGKLKRRSQGGDKQKSCANNNRLLHPSLSGLPY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 3 | 268 | 266 | 7.0E-75 | ||
| PANTHER | 4 | 267 | 264 | 1.1E-100 | – | |
| PANTHER | 4 | 267 | 264 | 1.1E-100 | – | |
| SUPERFAMILY | 9 | 266 | 258 | 9.61E-72 | – | |
| Pfam | 37 | 145 | 109 | 2.3E-21 | ||
| ProSiteProfiles | 187 | 294 | 108 | 8.679 | ||
| Pfam | 192 | 266 | 75 | 1.6E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0179500.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…