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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0209400 |
| Transcript ID | LotjaGi5g1v0209400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-(1,6)-fucosyltransferase; TAIR: AT5G28910.2 alpha-(1,6)-fucosyltransferase; Swiss-Prot: sp|Q9N0W2|FUT8_BOVIN Alpha-(1,6)-fucosyltransferase; TrEMBL-Plants: tr|A0A0B2PBF9|A0A0B2PBF9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi5g1v0209400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:51247769..51253764) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTGGCCAGGCTAAATGTCCTTTTCCTTTAGCCTTTTTCAAATTTATTTATTTATATAAGTCAGAAACTATAATATAT AATATAGATAAAAATCTGATATTTCTGTTTCTGAGGTGTTCTGATAAAGCTGTTTCACATATTCTTATCTTCTTCACTGA TTGCATCTTTTGTCGTTTTCATCATTCCATTCCTTGTGTGTAGTGGTGATACTTTTCCTTTTCACCTTGCAATGCCTTTT CACAAGGCATGGCTACTACCCTTTCCTTCACAAAAGCCTTATTCTTCTCAAAACTGTTTTCAAATTTTTCCATAGTTTGA ATTTTTCTGTGATTAGCTTCTCATTATTCGGTGGGGTTAGTTACAAAACTTCACCTTCTTCTACTAGCCCATCACTTAAC ACACACATACACACTCTATCTCTCACACTTTTTTTCTTCTTACTATTTTAGTATGAATTTTGTAGTCATGTGATGATTGT GCAATTGTTAAGTAAATATATGAAGCCTATGCTAATTTTCTCTTACTTTTCTTTTTTCTTTTTGGTTGAGCATCTATGAT TCTATTTTAATATGTAGATTTTTTTTATGTACCTATACTCTCTGTTCCTCCATGACTCTGTGTTTGAGTGTGGCTTTGAT AAATTCTCATGAGAACTTGCATTAATTTTCACAGTTACAAGGATGATAGTGATGGCCCACCAAACTGTTTAAGGAGACAG GTGCAAATAATTGTGTGATTTTTTTAGGTCTCTCTGTCCTTGGAGGTGGTTGGAGAACTCACGAGTTGAACCTATGAGAC TGTGAAAAGGGGTCACTTTTTGAATAAAGAATCGTTGAAAGAAGAAGAGTGACATTAATGGAGCCACTGAATCCCAAGTA CTTTGAGAGAGTGGTCTCACAGAGAGCACTGCAAATGGGAAACTCGTTTCCTTGTCAAATTTGTGTGGTGGGATTTCTCT GTGGAGTTTGCCTCACCTCTCTGTTCTTGGCTGCTTTGACTTCCTTTGGCACCTTTCAGTTTGGTCCCATTTCATTTTCT ACCATGAACATGGCTAATTCATCAGGGAACTCAACTTCTAATTATAATATCAGTAAGTTAAATTCCTCCTCCTTCATTTG AATTAATCATTTCTTAATTGTTCTTCTTTTGATTATTTTTATGTTGCTCTTGTGGCCAATTCAAGATACATTAGAGCTGG TTTTATTTAATTGAATAAAAATTGCATAAGAAAAACAGCTGCGGACCAATTTTATCCCATCATTCTCCATTCGCCCTCAT ACACGGAGGTGCAAAAGCTAAGACAAGTTGCTTTTGTCAACCATGATTTTGGTTTCACCATAATTTTTCAACGCTCACCA CGCTCATATCCGCAGCTGCAATCGTTGTCAATGAACCTCCACCATCCTCTGGTCCAGCTGCAACCACCTCCCTCATGTGC AGCCGAGGGCTGTCCTGAACCCTAGATGACAACACCCACCACCCTTAGGTCCGACCGTTATTGCCATCAACAAACCACCA CTAGCTTTTGTTCCAGCCATAGTTGTTGTCAACGTATCCCACTACCCTGGCACTTGTATGTAGCCGAAATCAATCGTCGC CATGGGGTTGTGGGCGCCGTTGACAACGATTACGGCTGGACCAGAGGATGGTGGGTTTGTTGACAGTAATGACGACCGGA CCTAAGGGTGGTGGGTGTTGGGTCTGGGACAACGTTTACGGCCGCACCTGACGATGGTGGGGTATGTTGACAGTGCGGCC GGACCAGAGGATGATGGAGTTCGTTTAGAGCGATTACAGTCGGACGTGAAGGTGGTGGGTTTAGCAACTAAAGTGAGATA AAATTTATAATAAATTATTTTTCTCTATTCTTGAAGTTAAAGAATTAAGTTTATTATGAATTCCAACTTCCTTTCAAAGT TTTGTGTATTCAAAGACGTTTGTTGATGAAGCAAACTTGATGAGAAGGACTTAAGCCTTGTGCATGAAGCAACTTTATGA AAGATAATTAACTTTCTTACTTTACGTTAGGAATGCTCTAATTAAACATTCTTTTTTACTAAGACTGCATTTGTTTTGCT TAATCAGTACAAGAAGGCACGTAGAACTGATCAAAATGATGTAGTAATGCAGTAATTAATCTGATTAAATTAAATTAATG GTAGAAAGTGTTTTCTTATATTTTTCTCAGATATGGTTACAAGTGGAGACTGCAATTTTAAGCTTAAGGAAAATGAAAGG TTATTGGACTTTAAGGGTATTGGAGATGGTGATGATAATAACAATGACAGAGTCTCATTGCTTTATTCGGCTTGGAGTGC TGTGTTGAATGAATCTACAAGTGGAGGAAATGAGTACTTGTTGAAGAAAAATGGAATCAGTAGGTCCAGTTTGCCTAATG CTCCACATTTGGAGAATTGTAAGGTGAAAACAGAACTATATGGAAGACTTGATAAGCGTACCGGAAATGAGAGCTTCCCA CCATGGACGAGTTGGAAGGGATTTCTACAAACATTCCCTGTTGCTGCATCCAGTGAGCAGATCAATGATCTAAGGCTTCA GGCTGCATCTGAGGGGGCTTATCCACCCTGGGTGCGTTCTTAAACATGATTTGTTTAGTGCATGTTTGAAACTGGTTCGA AAACTACAGTGAAGCCAAAATTATGGTGGACAGAAGCAATCTCCCTTAGCTTTTACTTTTATTCACCATGATCTTGGCTT TGTCGTGATTGTTGAATTGTGGTTGTCGAATGAGTTTCCAAATATGCACTCAGCGTACTAATATACAATGTTGGTGCCAA TATTGTGTTTGTTGTTACCTCCAAATATGCTAGTGAAGGGGCATCAGTTTCCATAACATTCACCTTTCATGACCAATTAT TGTTTCTTTACAACATGTTTGGAGTCAAAGTTGAACTTTTCGTAGTAACTTCCTCCTTCACAAAGGATACTACTAGAATC ACTTCTCTTGTTAACATGAAAACTTGTCTAATTTCCAAACACACACTTTAGTCATTTGTTTCTTAAATCCTTAACTTTTT CCTGAGCAGAGATATTGGCAAACTCCCGATATTCCAAACACACACTTAACTCTAATGAAAATTCCATGATTCCAACATTT AGGATGAGTAATCACTAATAAACTTATAGAAGAACACCATATAGATGGTTGAGGAAGAAAATTATACAATGTTCAGGGTT AAATTAAAAGATAAGATGGAATGTTGGAATCACTGGCCAAGTTGTTCATATAGAAGCTTTTGCAGATTGCAGGATCTGAT GAAGAAAACTATCCCTTGACTAGAAAAGTGCAGCACGACATATGGATCCATCAGCACCCTTTAAACTGTAGCGACCCGGA TGTGAAGTTCCTTGTTGCTGATTGGGAGAGATTACCTGGATTTGGTATTGGGGCTCAGATTGCTGGTATGTGTGGACTTC TCGGTATTGCAATCAGTGAAGGAAGAGTCCTTGTCGCTAACTATTATAACCGGGCTGATCATGATGGTTGCCAAGGTATA ACTTCTGTGCTTTCTATGTTCCTGTTGAATTCAGTCTTCACAACCTATGTACAATGTGAATATCTGATCACCACGAGTTT TCAAACACTGTGAACAAGATTACAAAAAACCAAAGGAATGTTAATCTGATGATATTATATACAGGGTCTTCGCGGTCTAG TTGGAGCTGTTACTTCTTTCCAGAAACATCTTCGGAATGCCGTCAGCGTGCATTTGAGCTCATGAACAATGAAGAGGCAT GGAGCAAAGGAATTGTGACCACAAAGGAAAATTATACATCGAAGCATATATGGGCTGGACCAACTCCAAGGTAATCAACC TCTCAGAACTGCAATTTATGACTGCTCCTATGCTGAGACCTGAATGTGCTGTTTTATTCTTCTAATGCTTACTATATGCT GCAGAAAGTGGGGTCTTCCATGGAATTATTTGCAACCTACAACTGATATAAATGGGACTCTATTGGCTTCTCATAGAAAA ATGGATAGAAGGTGGTGGAGAGCACAGGTACTATTCTTCTATCCCCAAATGACGTCTCAAGTTTTCGGTCCCACGAATGA AAGTTTGTCATGTCAATTAAAATAGACATAAGTGAGGCAGTTATAAACTTACATGGTGGTTATTAATTGACATGTTAAAA ATTTATTGGTGAAACAAAGAATGGGACACAGTTCAGGGAAAGAAGATTTCAATCCCTAGTTTTAGATGTGAAAAAAGGGG TGTTGTGTCCTCATAATCAATTCTTAACACTGAGAAGCTACTCACATAAGCTCCTTCATAGAATTGATTTTGTCCATAAA ATCAATTCCAGAAGGATTTTCATTTTTCAAATATGCACTTAATCTTGCTACCATAAATGTTTCTTTCAGGCTGTGCGCTA TTTAATGAGGTTCCCAACTGAATACACATGCAATTTAATGAATGAGGCCCGCCATGCTGCTTTTGGAAAATTAGCTGCAA AAATGGTTCTGGAAAGTCTTGGTGGAGAATGGCCCAAGGTTGTCTTAAATATGCATTGCTTTTCTCATTGGTCAAAAGAC TCTGCTTTGCACATGAACAACAATAGGAAGAATGAAAGTGCTTCCTAACTCTAAAAATAGAAAGTTTTTATTGAAAAGTG TGATATTTGATGCTATGAATGCATTAAATCTTATGTTTTTCAATAAAATTTTGAACAACATGCTACTCGTTGCTCTATTT GATAAATAAATGCAGCAGTAGTATTAGATATCTCATGTCCTAATGTGTGTCACATTTTCCTGTCTCGCCAATTAAACTTT TCCGTATTAATTAAAGAGACAATTGTTGCACGCGCGAGGCAGTTACAAACTTACATTGATCACGTATTTTCTTTTTAACG AACATGAAAAAATTTGATTGGTGGAATAGGAAAATGGAACACATTAGGGACAGACGATTTTCATCATCCTAGTATTAGAT ACTTGGTAGTATTGAGCTTTCATTTGTGGAAGTCATACACTTACCTTTACTCCTCTGCCTCAGGAAAGTAATTATGACAG GCCAAGTTCTGATATTGATGAATATGTTTGGTCCAATCACAAGCCATGGGTCCCTAGGCCTCTTCTGAGCATGCATGTAA GGATGGGAGACAAAGCATGTGAAATGAAGGTGGTTGAATTTGAAGAATACATGCAGCTTGCTGATAGGATTCGAAGGCAC TTCCCAAATCTCAATAGCATTTGGCTTTCCACTGAGATGCAGGTACAGCAATTATTACCACACTTTCCAAATTTGGAAAT CCTTCTATAACTGATTCTAAAGTCAAAATCAACTCTCTCGAGAGAAACTTTTATGAGTAGTAGCTTCTGAATTTTAGAAT TGATTCATAGGAAATATAAACTGATCTAAATAGCCATTCTTCCTAATTATTTTGAGTCATCTTCTAGATGATATTGTAGT TTGTTATATAGTCTTAACATTATTAACTCCAATTTGATTCAGCAAGTCATTGACAAAACAAGAGAATACCCTAATTGGAA CTTCCACTATACAAAGATAAGACGCCAAGTTAAGACTAACATGTCAATGGCTGATTATGAAGCCAGCTTAGGAAGAGAGA CAAGTACTAATTATCCAATGGTGAATTTCTTGATGGCTGCTGATTCAGATTTTTTCGTTGGAGTGTTGGGTTCTACATGG TCGTTTCTTATAGATGGAATGAGAAATACTGGGGGAAAGGTAATGGCTGGGTTCTTGAGTGTCAACAAGGATAGATTTTG GTAGAGTATATATGCCTTGTAAATATTATATTATTTGTAGCCACGGTAATAATGTGATTCTTTGTGTATATATTGTAGTG TTATTACTATGAAGAATCAAAAAAACTTGGACCCTGTTCCTTGAATCTATTATTTTTTGCCAGGTTCCTTTTTGTTCTGT TTCATGGGGAGTTGCATGGTAATTCATCTGAGGTTTTTGGTATGGAATTGTTCCATTTTCAAACTTTGCAACTAAT
CDS sequence (LotjaGi5g1v0209400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCCACTGAATCCCAAGTACTTTGAGAGAGTGGTCTCACAGAGAGCACTGCAAATGGGAAACTCGTTTCCTTGTCA AATTTGTGTGGTGGGATTTCTCTGTGGAGTTTGCCTCACCTCTCTGTTCTTGGCTGCTTTGACTTCCTTTGGCACCTTTC AGTTTGGTCCCATTTCATTTTCTACCATGAACATGGCTAATTCATCAGGGAACTCAACTTCTAATTATAATATCAATATG GTTACAAGTGGAGACTGCAATTTTAAGCTTAAGGAAAATGAAAGGTTATTGGACTTTAAGGGTATTGGAGATGGTGATGA TAATAACAATGACAGAGTCTCATTGCTTTATTCGGCTTGGAGTGCTGTGTTGAATGAATCTACAAGTGGAGGAAATGAGT ACTTGTTGAAGAAAAATGGAATCAGTAGGTCCAGTTTGCCTAATGCTCCACATTTGGAGAATTGTAAGGTGAAAACAGAA CTATATGGAAGACTTGATAAGCGTACCGGAAATGAGAGCTTCCCACCATGGACGAGTTGGAAGGGATTTCTACAAACATT CCCTGTTGCTGCATCCAGTGAGCAGATCAATGATCTAAGGCTTCAGGCTGCATCTGAGGGGGCTTATCCACCCTGGATTG CAGGATCTGATGAAGAAAACTATCCCTTGACTAGAAAAGTGCAGCACGACATATGGATCCATCAGCACCCTTTAAACTGT AGCGACCCGGATGTGAAGTTCCTTGTTGCTGATTGGGAGAGATTACCTGGATTTGGTATTGGGGCTCAGATTGCTGGTAT GTGTGGACTTCTCGGTATTGCAATCAGTGAAGGAAGAGTCCTTGTCGCTAACTATTATAACCGGGCTGATCATGATGGTT GCCAAGGGTCTTCGCGGTCTAGTTGGAGCTGTTACTTCTTTCCAGAAACATCTTCGGAATGCCGTCAGCGTGCATTTGAG CTCATGAACAATGAAGAGGCATGGAGCAAAGGAATTGTGACCACAAAGGAAAATTATACATCGAAGCATATATGGGCTGG ACCAACTCCAAGAAAGTGGGGTCTTCCATGGAATTATTTGCAACCTACAACTGATATAAATGGGACTCTATTGGCTTCTC ATAGAAAAATGGATAGAAGGTGGTGGAGAGCACAGGCTGTGCGCTATTTAATGAGGTTCCCAACTGAATACACATGCAAT TTAATGAATGAGGCCCGCCATGCTGCTTTTGGAAAATTAGCTGCAAAAATGGTTCTGGAAAGTCTTGGTGGAGAATGGCC CAAGGAAAGTAATTATGACAGGCCAAGTTCTGATATTGATGAATATGTTTGGTCCAATCACAAGCCATGGGTCCCTAGGC CTCTTCTGAGCATGCATGTAAGGATGGGAGACAAAGCATGTGAAATGAAGGTGGTTGAATTTGAAGAATACATGCAGCTT GCTGATAGGATTCGAAGGCACTTCCCAAATCTCAATAGCATTTGGCTTTCCACTGAGATGCAGCAAGTCATTGACAAAAC AAGAGAATACCCTAATTGGAACTTCCACTATACAAAGATAAGACGCCAAGTTAAGACTAACATGTCAATGGCTGATTATG AAGCCAGCTTAGGAAGAGAGACAAGTACTAATTATCCAATGGTGAATTTCTTGATGGCTGCTGATTCAGATTTTTTCGTT GGAGTGTTGGGTTCTACATGGTCGTTTCTTATAGATGGAATGAGAAATACTGGGGGAAAGGTAATGGCTGGGTTCTTGAG TGTCAACAAGGATAGATTTTGGTAG
Protein sequence (LotjaGi5g1v0209400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPLNPKYFERVVSQRALQMGNSFPCQICVVGFLCGVCLTSLFLAALTSFGTFQFGPISFSTMNMANSSGNSTSNYNINM VTSGDCNFKLKENERLLDFKGIGDGDDNNNDRVSLLYSAWSAVLNESTSGGNEYLLKKNGISRSSLPNAPHLENCKVKTE LYGRLDKRTGNESFPPWTSWKGFLQTFPVAASSEQINDLRLQAASEGAYPPWIAGSDEENYPLTRKVQHDIWIHQHPLNC SDPDVKFLVADWERLPGFGIGAQIAGMCGLLGIAISEGRVLVANYYNRADHDGCQGSSRSSWSCYFFPETSSECRQRAFE LMNNEEAWSKGIVTTKENYTSKHIWAGPTPRKWGLPWNYLQPTTDINGTLLASHRKMDRRWWRAQAVRYLMRFPTEYTCN LMNEARHAAFGKLAAKMVLESLGGEWPKESNYDRPSSDIDEYVWSNHKPWVPRPLLSMHVRMGDKACEMKVVEFEEYMQL ADRIRRHFPNLNSIWLSTEMQQVIDKTREYPNWNFHYTKIRRQVKTNMSMADYEASLGRETSTNYPMVNFLMAADSDFFV GVLGSTWSFLIDGMRNTGGKVMAGFLSVNKDRFW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 594 | 594 | 0.0 | – | |
| PANTHER | 1 | 594 | 594 | 0.0 | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| Phobius | 28 | 53 | 26 | - | – | |
| TMHMM | 28 | 50 | 23 | - | – | |
| Phobius | 54 | 594 | 541 | - | – | |
| Gene3D | 217 | 413 | 197 | 3.8E-11 | – | |
| Gene3D | 433 | 590 | 158 | 5.4E-11 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0209400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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