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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0247300 |
| Transcript ID | LotjaGi5g1v0247300.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparan-alpha-glucosaminide N-acetyltransferase; TAIR: AT5G47900.1 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624); Swiss-Prot: sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase; TrEMBL-Plants: tr|G7IEH8|G7IEH8_MEDTR Heparan-alpha-glucosaminide N-acetyltransferase-like protein; Found in the gene: LotjaGi5g1v0247300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:55564019..55568600) extracted from Lotus japonicus Gifu genome v1.2.
AGAACACCCCTTCTTGTTCATGATCATGATTCCTCAATTCTCATTCTTCATCAAAACGAAGACACCATCGTTCCTTTACC ACCCGATCATAAACCTTCACCCTCTCTTTCCGTTCCCAGTCAACGCCTCGCTTCTCTCGATGTCTTCCGCGGCTTAACCG TTGCGGTTCGTCCCCAATCTTCAAAATCTTCACAATTGCTTCAATTTTACTGTCAATTAGCTGCATAACCATCTTGTGAT TTTGCTGACCTTGTCAAGCTAACTGGAAATTGGGTTGCTCCTTCAAATTGTGATGCAGTTGATGATTTTAGTTGATAATG TGGGAAGAGCTTTTCCATCTTTGAATCATTCTCCATGGTTTGGGCTCACGCTTGCTGATTTTGTGATGCCGTTTTTCCTC TTTGGGGTTGGCGTTTCAATCGCTCTGGTATTCAAGGTATTCAATCTACCAGACCTACCTTCCCGCCTTTTTTCCAAGCT ACCATTTGGATTGAATGATTCTAAATACTTCTACATGTTCCTCTTAATTACTAAATGAAGAAATTATTTATTTTTATTTT CAAGGTATTAAATGTATTTACTTTTGAATTTAATATTTTCTGTATAATAGGAAGATGTTTATTGGTTAGGAGGATGCAAC ATTTCTCCTTTGGATTTTTGTACGGTGCTGGTGGCTTTCTTATATATAAATCAGGGTTGTTAATGGTGAATAGTGTAGCG TAGCAGCAAGCCCAAAAAACGTTATTTCGAGCGCTATTGCGGCAAATAGCGGTGAACCCCCAGGGCGCTACGCTATTGCG TGCTGTTAATGAGCCTGAATTATAAATACAAATAATAAAAGAGCTAAAATTTTGAACATTGTTCTAATTCTTGGGTAGCC TTTCAGAAAGTCTCTAGCAAACCAAATGCCACAAAGAAAGTCATATCAAGGACAATTAAGCTTTTCCTTTTGGGGCTGTT GCTACAAGGTATGTTCTTCTTCTGCTTTGCTTCCATTTCATTACCTTAGCAAGCAGTTGAAACTTGTCAGGAAAAGTTAT GTATTCTTTTGCACTTCTTCTTATCCATATTCCATAGAAATTCAATCCATGTTTTGTATCCGTTTACTTGCAGTATGCTT TGTGTGCTGGCTTGATAGCAATTGCTTTAATGTTTCTTTATGAAACTTATCCATAGGTGGCTATTTCCATGGGCGCGGCC ATTTAACTTATGGAGTTGATTTAAGCAAGATACGCTGGCTTGGTGTACTTCAGGTATCTGTAACCATAGAGTAGTTGTCA TTACTGTCTAACTTAGTAAGGTTTTTTTTGGGAGTGTTTCTAATTATGGCGATATAGCGTTGTTTAGTCTATGTAACCAA CCCCCTAGCAGAAAACGACAGGTTGGTTTTGGTTATTTCTAATTCAGTATACATTCGATATTATTGCCGTACATGTTATT TTGTTGGTGATTTACTTTTTGCCACTGGTAAATTAACAGTTTCATATTGAATGATGCTTTCTGAAATTACTTATTTGAAA TAGCTAATGAGAAAATGCACCAAGTATCTTTATAATACTGCTTCTTTGACATGTTAATTTTGATGCCCGTTTTATTGTAT TGAGGAAGTAAATTAAAAAAATTCTCTCTATTAAGTTTTTTTTGTTTTGTTTTTTGAAACAACTCTATGAAGTTAGTATA ACTTAAGGATGGTAGATGGTTGCAGGTTTACAGTTGGTAGAAGAGTCATTTAGTCATTGTTTGGTTGCTCTGTTATGGGT AGGGCATAGGAATTACAACTGAGAAAATGGCCACAATTTTGAAAATAATCAATTTTGTTTTGCGTTATTTTGATAAATTT GTTTTCAATTAGATACATATTTTCCTTGTAATATGCAGAGGATAGCTATTGGGTATTTCTTTGCGTCTACATCAGAGATT TGGCTAGTGAACAATAATATTTTGGTTGACTCACCAGCAGCTTATGCGAGGAAATACTCCATTCAGTGGTTAGTTTACTT TTCTGGTGATTAAAGATTACAAGGGGCTTCCTCCATCTCGGTGTCAGGATTCAACTTCTGTGAATACCACTTTTGCTTGC CTTGTGATATTCCTTCGTGCTAATTGCTTGTTTCTTTGTCCAGGATGTTTTCTATCTTACTTTGCTCAGTGTACCTTTGC TTGCTCTATGCCCTCTATATTCCAGATTGGAAGTTCGAACATTCTAACTTTCTTCGAAATGTGAGTTGACATGGTTTGTC ATTCTGTGCTACTGGATGCTAAAACACATATTATGAATTTTTTTGGCTGATTTTAACTTATGCTTGCTTGTGCACCCAAG TTCTAAGATGGTATTAGACCCATCTAAGATTTGTATTGTATTGAGTCACCCATAGATGGGCCACTTGCAAAATTCACATT GCAGTATAAAGAGTAGGGTAATCCTCATCCCTAAGCTAGCTTTTCAGGTAGAGTTAGGCCTAGGCTCGAGTCCTAAGGTC TGGGTTAACTCTGATTATTATATTTAATTTTGTATTTCTATTTTCATTTCCATGGCTCTCCCCTCCTAGTGGTATGAAAA GCCTTTAGTTGTTTTGCATTTTCTTTTCTTATGGAGAATAAATCGACATGCAATATTTTTCTCCAGGTTCATTGTGGAGT GAGGGGCAGTCTTGAACCTCCTTGTAATGCTGTGGGATTTATTGATAGATTAATTCTTGGTGAAAATCATATATACCAGC GTCCTGTGTATAGAAGAACAAAGGTTATTTACCCTCTGACGTATTTTCTGTCTTGAATCTACTGCCTCCTTAAACTTCTT TTGTTTTATCCATTAAATAATCTCATTCTTGAGTCTTGACCTCCTTTTCATTTTCAGGAGTGCAGTGTTAATTCACCTGA TTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGTCTTGCACCATTTGACCCAGAGGGTATATTGAGGTTAAACATAG TTCCTGCTCTCCTTTTATCTTTTCTTTTGTAATTATTATAGTGGCATGAAAAGCTATGGTACATGTTATAATGTGATGTG TACTTGGTTTATGGCATGTTCATTTCTTTTCACTGCACTATAGACAACCTGATTCATGATAAATTATTCAATTAACTATC TTCATTTGATTAACACTGAAATTTTAGTGATTTTGGGAAAGTTGGACTGTCATCTTTGGCTTGGTTGGGTCATCTAGAAT TTTCTTTGGGCCGGTTTATATCCATACTGGGCCCAGACTAGCCCAGATTTAGCTTCAGTCAGCCATCCCATACTTTTTAT TGATTATTGAGCTAGTCCATCAAGTTTAACTGATTTTGACGGTATTTAAATTTTATTAATGCACTTTGATTGGTTGCTAA CTTACTTTATTAAATCTTCTAGTTCACTGATGGCTGCCATTACATGTTTCATGGGACTGCAATTTGGGCACATACTTGTA ATTTTTCAGGTTCGGATATGATGCTTTTACAATGTATAAGAATCCAAGATTAATGCCTTTCTCATGATATAAAGGTAGAA GATGTAAAGTTTGTCTTGTGTGTGTGTTAACTATTGTCTTCTCCATTCAGGGTCACAAGCAGAGGATACTTCTTTGGTCT GTGTTTTCCTTCTTTCTATTGCTGATTGGATATGTTCTGGAGATTTTAGGTACTATCTAATTTTAAATTTGTTGAGGTAC ATTCTATTCTTCAACTAACAACTGTAAAGTTTTTCAGGAATTCCTTTATCAAAAGCTCTGTACACATTAAGCTACATGTG CGTCACTGCAGGAGCATCAGGCTTGGTCTTGACTGCTATCTATTACATTGTAAGTTCATCTGCGTGTCATAAATAGAGGT AATTTATATGCCAAGGAGAAAAAGAGATAATTAGCAGATAGGCATGAGAGTGGTTACTCAAGTGGTTGATTACCTGGTCC TCAAGGAAGGATATACATAAGCTCCTTGTGTGATTCTCATGAGAGTGGAAAGCCATAATTTGGGATCACCATAGCCAGCC ATCAATTGTTGAGAGGAAAGTATTGCTTTGTTGTCTCACTGAACACCTCTCCATCACAGCCAAAAAACAAATAGTGACAT TTTAATCTCAATATATAAGCTAACCAAGAAAAATAATTTTCTTTCTCTTCTGATTTTATTTAAATGATGCATATCCCATA TTTTTGTAGATGAAAGATTAAAAGCCTAACAACATCACTAGAACTTATTTTCTTGCAGGTTGACATAGGACATTTTAGAA AGCCTACAGCTTTACTACAATGGATGGGAATGAATGCTCTTATTGTATACGCATTGGCTGCTTGTGATATATTCCCGTTA GTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAACTTGGTAATGTTCATTTCCAACGGTTTTGTTTGTCTCCTCTT TCATTATACTTGATTGTTAAAATTGGTAATTTAATTTGCAGGTTGATGCCAGTGAAACTTTACTACAGAACGTATTTCAT TCTGAAAAGTGGGGTACACTGGCCTTTGTAATAGTTGGGATTTTATTCTGGTGTCTTTTTGCTGGTTTCCTTCACAAGAA AGGGATATATATAAAAATGTAA
CDS sequence (LotjaGi5g1v0247300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTTAGTTGATAATGTGGGAAGAGCTTTTCCATCTTTGAATCATTCTCCATGGTTTGGGCTCACGCTTGCTGATTT TGTGATGCCGTTTTTCCTCTTTGGGGTTGGCGTTTCAATCGCTCTGGTATTCAAGAAAGTCTCTAGCAAACCAAATGCCA CAAAGAAAGTCATATCAAGGACAATTAAGCTTTTCCTTTTGGGGCTGTTGCTACAAGGTGGCTATTTCCATGGGCGCGGC CATTTAACTTATGGAGTTGATTTAAGCAAGATACGCTGGCTTGGTGTACTTCAGAGGATAGCTATTGGGTATTTCTTTGC GTCTACATCAGAGATTTGGCTAGTGAACAATAATATTTTGGTTGACTCACCAGCAGCTTATGCGAGGAAATACTCCATTC AGTGGATGTTTTCTATCTTACTTTGCTCAGTGTACCTTTGCTTGCTCTATGCCCTCTATATTCCAGATTGGAAGTTCGAA CATTCTAACTTTCTTCGAAATAATAAATCGACATGCAATATTTTTCTCCAGGTTCATTGTGGAGTGAGGGGCAGTCTTGA ACCTCCTTGTAATGCTGTGGGATTTATTGATAGATTAATTCTTGGTGAAAATCATATATACCAGCGTCCTGTGTATAGAA GAACAAAGGAGTGCAGTGTTAATTCACCTGATTATGGACCCTTGCCTCCAGATTCACCTGGATGGTGTCTTGCACCATTT GACCCAGAGGGTATATTGAGTTCACTGATGGCTGCCATTACATGTTTCATGGGACTGCAATTTGGGCACATACTTGTAAT TTTTCAGGGTCACAAGCAGAGGATACTTCTTTGGTCTGTGTTTTCCTTCTTTCTATTGCTGATTGGATATGTTCTGGAGA TTTTAGGAATTCCTTTATCAAAAGCTCTGTACACATTAAGCTACATGTGCGTCACTGCAGGAGCATCAGGCTTGGTCTTG ACTGCTATCTATTACATTGTTGACATAGGACATTTTAGAAAGCCTACAGCTTTACTACAATGGATGGGAATGAATGCTCT TATTGTATACGCATTGGCTGCTTGTGATATATTCCCGTTAGTTATCCAGGGTTTCTATTGGCATTCTCCTGAAAATAACT TGGTTGATGCCAGTGAAACTTTACTACAGAACGTATTTCATTCTGAAAAGTGGGGTACACTGGCCTTTGTAATAGTTGGG ATTTTATTCTGGTGTCTTTTTGCTGGTTTCCTTCACAAGAAAGGGATATATATAAAAATGTAA
Protein sequence (LotjaGi5g1v0247300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILVDNVGRAFPSLNHSPWFGLTLADFVMPFFLFGVGVSIALVFKKVSSKPNATKKVISRTIKLFLLGLLLQGGYFHGRG HLTYGVDLSKIRWLGVLQRIAIGYFFASTSEIWLVNNNILVDSPAAYARKYSIQWMFSILLCSVYLCLLYALYIPDWKFE HSNFLRNNKSTCNIFLQVHCGVRGSLEPPCNAVGFIDRLILGENHIYQRPVYRRTKECSVNSPDYGPLPPDSPGWCLAPF DPEGILSSLMAAITCFMGLQFGHILVIFQGHKQRILLWSVFSFFLLLIGYVLEILGIPLSKALYTLSYMCVTAGASGLVL TAIYYIVDIGHFRKPTALLQWMGMNALIVYALAACDIFPLVIQGFYWHSPENNLVDASETLLQNVFHSEKWGTLAFVIVG ILFWCLFAGFLHKKGIYIKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 420 | 420 | 6.8E-238 | – | |
| PANTHER | 1 | 420 | 420 | 6.8E-238 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| Phobius | 20 | 45 | 26 | - | – | |
| TMHMM | 22 | 44 | 23 | - | – | |
| Phobius | 46 | 56 | 11 | - | – | |
| Phobius | 57 | 76 | 20 | - | – | |
| TMHMM | 57 | 76 | 20 | - | – | |
| Phobius | 77 | 95 | 19 | - | – | |
| Phobius | 96 | 115 | 20 | - | – | |
| TMHMM | 96 | 115 | 20 | - | – | |
| Phobius | 116 | 134 | 19 | - | – | |
| Phobius | 135 | 154 | 20 | - | – | |
| TMHMM | 135 | 154 | 20 | - | – | |
| Phobius | 155 | 244 | 90 | - | – | |
| Phobius | 245 | 268 | 24 | - | – | |
| TMHMM | 246 | 268 | 23 | - | – | |
| Phobius | 269 | 274 | 6 | - | – | |
| TMHMM | 275 | 297 | 23 | - | – | |
| Phobius | 275 | 297 | 23 | - | – | |
| Phobius | 298 | 302 | 5 | - | – | |
| TMHMM | 302 | 324 | 23 | - | – | |
| Phobius | 303 | 327 | 25 | - | – | |
| Phobius | 328 | 346 | 19 | - | – | |
| TMHMM | 345 | 367 | 23 | - | – | |
| Phobius | 347 | 367 | 21 | - | – | |
| Phobius | 368 | 390 | 23 | - | – | |
| Phobius | 391 | 411 | 21 | - | – | |
| TMHMM | 392 | 411 | 20 | - | – | |
| Phobius | 412 | 420 | 9 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0247300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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