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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0282300 |
Transcript ID | LotjaGi5g1v0282300.2 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | DUF668 family protein; TAIR: AT1G34320.1 Ikzf5 (DUF668); Swiss-Prot: sp|O06995|PGMB_BACSU Beta-phosphoglucomutase; TrEMBL-Plants: tr|A0A0L9TZ66|A0A0L9TZ66_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0282300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59853752..59860188) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTGGTATTTGCTCGAGGTCGTGGAAAGCCACTGTGGATGGTGTAGCTGTAGATAATGCACTTGATGGAAGCTCGAG GAATGCTAATGGCCATGCTAATAATGAGCCTGGAACGACTTATCAGACTGGACATATAAATAGCAACTCGAATCTGCGTC CTATTGACGATGAATCGGATAAGCATCAACGAGAATCGTTTTCATTCTCTGCATTGGATAAGGTTTCATATGGGACTAGT GGTGATGATATCAATGATGGCATTCCTAGCTTGTCCAGGGCGTTATCACATAAATCTAGATCAACTAGGTCAAGGCAAGC TGCTGTCAAGGTAAGTTGCCATTCTCATGTTTGATCTTTCTATTTCTTTTGTGTTTGGATTAGCTTGTTCTGGCTTAAAA TCTGTTTTTTGTGTAAATATTAATCAAAACCAATTATTTTTTGTTAATGGAAAGAGTATTTTTATTAGATAGAAAGAATC ATAGAAAAGAGGTAAAGTACAACCTGGGGGAGGATAAGATATCACTCAAATAAAGAAAAACATATTAAAGGTAAAATCTA CAATTCAAGAAAACTGTCTGCATATCAGAAAAGGAAACTCTCCTGGAAAAGCCATGAGTAGAACACCTAAGTGAAACCAT AAACAAAATTTCAAAGCAAATTCAGTCCGTTTTGTTAAGTTCAAGTCTTTGAAAGCATATTAGGTGGAAGCCTGGGAATT GCTTTTACATCTTTAACACACAATTTTAACTTTATTTAGAACATAAAATAATGGGGTCATCAAGGACCAAACTCCTGATT AGTGGCTGTGTGGTCATAGAGGCTCCAATACAATATCTAGAACAAACTCTCCCAAAAGCTTACGTCTTTAGTTGCAGGCT CTTAAATTTATCTTATATCTCGCAATCGCAACAGACTTCAACTAAACACACTAGAGAACTGAAAAATCTGCACACTGTGA CAACATGTTGATTTTGAACGCTCTTTATTCTGCCAAAACTTTCCAACTGAACCAAGAGAAAATGCTCCATAGTGAAGGGG CTAGACACCTAAAAAAATATTCCTATGACTAAATGGGCTTCTCTTAACAAATATGACAACGATGAGCTGTGTAGGTCCTA AGATTCGACAATGTGTTGCTTGTATTATTCTCATCAAGTGCTAACTGCCCCAACCCCCTAGACATGACTTGATAACCCTG GTGTGAAAGCACACTAAGCAATAGGTCCCTTGATGTGGTTTGATCAGGGCTTGACCAACAAGATCTTGAAAGAATCGGGC CAGGGCAGAACTTCAGGGTCATAAGGTAGTTAAATAGAACCTGATTATAATGATTGGTTATGGAAGCTCTCTAGATAGTT TGTGGTCTCTGTTTACCATGTAGAGACAACCATTTAGTAGAAAAAAAGGTAGAGTTTGTGCCAAAAGATCTTTATGGGTC AGAAAAGTATTTGTGTACGTTGTGTTTTTAATTATATTTATTAAATTCCCTTTACTCTAATGAGCTAATGCCTCACATGG TTCCAAACATTTGTCTAAGATCAACCTCTGCTTGATGTCATGGGTTAGATGATTAGATCTCTCCCCTTCCCTGTTTTCTG GTCTGTAAGTCCTCCTATGTAACAAGAAAAAAGATTGCCTTTTTAGTCTTATCTTTTGGTGTACTACAGGTATCAGAAGT GAGTTCACTTTTGGGCAGAGCTGGTACAGCTGGACTTGGCAAGGCAGTAGAAGTTTTGGACACATTAGGAAGTAGTATGA CAAATTTGAATCTCAGTAGTGGCTTTACATCAGGCGTGGCAACAAAAGGAAATAAAATTTCAATTTTGGCCTTCGAAGTT GCAAACACAATTGTTAAGGGTGCCAATCTGATGCAATCTCTTTCACAAGAGAACATTAAACATTTAAAAGAGGTGGTTCT ACCATCTGAAGGAGTGCAAAATTTGATATCCAGAGATATGAATGAACTCCTACGTATTGCTGCAGCAGACAAGAGGTAGA TTAATCATGAATGTTTTCAGGATCAACTTAGTAGCTTTCTACCTTTTGATTTGGAGCTTAATTTCTTCAGCTACTGTCTG TACTTAAACTTCACTATCTTGTACTGTTTTGACAGAGAAGAATTGAAAATATTTTCTGGTGAAGTTGTACGATTTGGAAA TCGTTGTAAAGATCCTCAGTGGCACAACCTGGATCGCTATTTTGAGAAGTAATCTTAGTTGAATTTATTAAGCTTACCTT GTATTTTTTCTTGTAACATCTAACATTGTGTTAAGTATGATTTGCTTTGTCGTTGTTAATTTTTAGATTAGGCTCAGAGC TGACACCACAAAAGCAATTGAAAGAGGAAGCAGAGGTTGTGATGCAACAACTAATGACCTATGTTCAATATACAGCGGTA AGATGCCTGTTATAAGGAACACTGCACGTGCCTTTCTTCTTGCTGAGATTTATATGCTGAACTTATAATTATCTAGATCT GAATTATCTTCTTGATTGACGTGTGTATTTGAGTAACTACACTACAGAAAGTGGATCCTTATTTCTATAACTACACTATC TTCTTGTACTAAATTAGTTTAACATTTCTCTTGGCATGCAGGAATTATATCATGAATTGCATGCCTTAGACAGGTTTGAT CAAGATTATCGGCGCAAGCTTCAAGAAGAGGACAATTCAAATGCCACACAAAGAGGTAAATGTTGACTTGGATTTACTTA TACACAAGTGTATTAAATCCTGTGTTCTTGTATTGTGTATATGAAGATAGTAATTCTGTTTACAATCAGTATTTATTTAT GGTTGTTTTACACCAAAAATATGCATTGATTAGTGAAGTTTGCAGTTATTGCAAACTCTGTCTTTATATAATGACAAAGA AAAGGTGATTCGAGGAAAGACTCAAGCAACAAGTTAATCCTTTAGAGGACAAATAAAGAAAAAGAATGTTATTCTGAATA ACCATGCTAGTCTTTCTTACCACAATAACTGTTCTTATTTTTAGGAGACAGCCTTGCAATTTTAAGATCAGAACTGAAGA GTCAAAAGAAGCATGTAAGAAATTTGAAGAAAAAATCACTGTGGTCCAAAATTTTGGAAGAGGTAAGAAGTCAGTACTAT TCATATTGATTTTGCAAGTATTCATTGGTGAGTGTTTATCACAATAGAAGTTTGAGTTTTGAAATAGGAATTTATGATTA GATTTGATATGGCATCTGAAAAATGTATGTTATTCCTGTTTTCATTGAATTATGTTCTGTTCTAATTTTGTTGTTTCAGT TGACCTGTATTTTTTCCCTTGGATAACATTTCTCTTCAATACTTTCGGCCTCTTTTTCTTAAGCACTTCTCTTATATATA AATATAAAATATGATTGTTTTATTTGTAGGTGATGGAAAAGTTCGTAGACGTTGTCAATTTTCTGTATTTGGAGATACAT GAAGCATTTGGTAGTGCTGGTATGCTTTAAAGAATTGCAAGGATTATTGTTTATGATTAGCTGCAGGCCTGTATGTTTTA TTTTTTTATTCCTTGAGTGTTTGGATAATGAGGGGCGGGGGGTGGGTATAGTTATCTCCCTGCATGTAATATAATGTCAA GCATGTTGGAATCTGTTTATAGAAAGAGTGTACGGTGTATTGATGAAAGGAACTCTTTTCTGTAATGTGACATAAAATTC TTCATATGGTATTCAGCAACATGGCTCATTCATTGGCATAGTTATAGTTGCAAAGTTCTCGTCCTTTTAATTCTTATCTG AAGAAGTGCATAAATTTGATGAAATTAGAATTCCATCTTATTTTTTAAATTATCCTTTACTTGTTTTTTCCAAGTAAGTT TTCTGATCTAAACCTTGTGCTGACCTTTTCATAATTTAGTCCCATTTGATTTAAGTTTACTTCTTTTTTCTTACAACATG TAGACCATCCTTTACAGTTGTTGAGATGCCAGATTAAACAGAAATCTCTTTTATACTTGTTTTCTTGTTCAACCTTGCAG ACCCTGATAAGCAAGTGAAAGATTCTCAAGGAAACCATAAGAAGTTGGGATCTGCTGGTCTTGCTTTGCATTATGCAAAC ATTATCACTCAAATTGATACTCTGGTCAGTTAAAGATTTTACTTTAATTACATAATCTATTATAATTGTTGCTGTCTTGG AAGTTCAAAACATCCATTTTGTATCTGTTAAATAATGTCGTCTTGCATTAGCGTCTCTTATTCCTTCTCTGCCCAATTTT TGTGAAAAAGTTGGGTAGCAGAAGCATCTACCCAAACAAGCTTCATAGTGTGTTGCTAGAAAGCCCTTTCTCACCTCAAA CCCAGCTTCATTAGTTCATAATAATGCTTATGTTGGGGAGGCGGTCATATTGTTGGTTCTAGTTTTTCTGCATAGAATAA TGCTTTTAACGACTGTTAGAGCTACAAATGTTTACAAACTGCACTGTTGTTGCATATGAAAAACAATAGCAAAATGGTTG TGAACGTAGCCGTGTGTTGACATTTTAACTTAATCAGGTGTCTCGATCAAGTTCTGTGCCTCCTAATACGAGGGATACTT TATATCAAGGGCTGCCACCTAATGTAAAATCAGCATTGCGTACGAGGTTACAGTCATTTCAGGTCAAAGAAGAGGTGCAT ATCCCATTTCCATCATACATTTTATTAGCTGGGTATGCATGCTGTAAATTTTAGTGTAGTTATTAATTAACCTTTGTCCC TCTCATTTAGAAAGAATAGCTATCAGGAGTATTTGACTCAAGTTTTTAAACAATCAGGAGTATTTAGTTTTCTTTATGAC ATTCTCTTATATCTTCTGCATAATAATCTGGCAGAATTTTGATTATACCCATTTTTTCTTTTTTGAAGTTTAATTTTTGT TCACATGTTCATGCTATGAGTGCTTCAAAACAAATGTGCTTTTTTTTTTTGAAAAGCAAAACAAATGTGCTTGTCTGCAT ATCAATTAGAACCAATATGTCACAGCATTTTTTTATTTCAAATTCATTAAATGCTTGTTAATGACTTGCCTGATTCCATC TTCTAATGATTTTGTTGAACTTCCTTGCTGTCAAAGCAGTTTTACTGAGCTTTTGCTGCATTGCCTATATTGATAGTAAC AAAAAAATTAAATCCAAATCCTAAATGAAGGACATATTCTTGCAGCTTACTGTCCAACAGATCAAAGCTGAAATGGAGAA AACATTGCAGTGGCTTGTTCCTATTGCCACCAACACAACGAAGTATGTATGCTAGCCCTCACTCAGAAATTCCTAAATAT CCTAGTATTGTGTTATGGTATGCAGCACATTCATGTGTTTGCTTATCGTTATTGTTAAAAGTATAATGTATCACCCAGTA GCTTAACTTTTGGGGATAGTTGGTTCATGATATGCTATCAGAGCCACTATGACAAATGCTCTAGAGTTCAATCCTTATTC CCCTCATTATTCTAATAAAAAAAAATTCAGCACAAGATAAGTGAGTCTGTGTATTGTCCACGCTTCAAGCCCAGTGAGCT CTTGCGTGAAGAGGTGTGTTAGAAACATAATATAAACCATTCATGTCTTCCCTCAATAGCTAAAGCTTTTAGCATAGGTG GTTCATATCAATTATAGTCAACAATCAGCAATACTCATCATTGTATTCATATAGAAAAATTCAGGTTTATCTGTATGGGC CATTTAACATTTATGAGTATTATTGGCTTTCATGTGTTCTCTCCTATTATTAAATCACCTTTAACCTCTCTATGTTCTGT TCTCTTATTTATTTCTCTTTTTGTCAATTGTATTAATTCAGAGCTCATCATGGCTTTGGATGGGTTGGAGAATGGGCAAA TACAGGGTAAGGTCAAATTTTTATCTTTATTTCCTCCATGTTTTTTTTTATTCCCTAACTCAAGCTTGTATGTATAGGTC TGACGTCAACCGTAAACCCGCTGGCCAAACCGACTTGTTGAGAATTGAAACGCTCCACCACGCTGACAATGAAAAAACTG AAGCTTACATACTTGAACTTGTTGTCTGGCTCCATCACCTAGTCAGCCAAGTGAGAGTTGGTAATGGAGGAATAAGGTCA CCAGCCAAATCGCCAATCCGTTCTCCCACTCAGAAGACAGGGCAGTTATTCACACACAAAGGTTGCTCTACTTCTCCCAT GTTAACATTTGAAGATCAGCAAATGCTTCGCGATGTCAGCAAGAGGAAACTAACACCAGGCATCAGTAAGAGCCAGGAAT TCAGCACTGCCAAGACTAGGTTGAGCAAACACCATAGGCTTAGCAAGAGTAGTAGTCATTCCCCAATCAGTGAAAGCAAA AATGACATGTTCTCTACAAGGAGGGTGCTGCCTTCTGTTCCTGTCATTGACTTTGATATTGACCGAATGAAGGCCTTGGA TGTCATTGATAGGGTGGATACCATTGGAAGTTCTTGA
CDS sequence (LotjaGi5g1v0282300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGGTATTTGCTCGAGGTCGTGGAAAGCCACTGTGGATGGTGTAGCTGTAGATAATGCACTTGATGGAAGCTCGAG GAATGCTAATGGCCATGCTAATAATGAGCCTGGAACGACTTATCAGACTGGACATATAAATAGCAACTCGAATCTGCGTC CTATTGACGATGAATCGGATAAGCATCAACGAGAATCGTTTTCATTCTCTGCATTGGATAAGGTTTCATATGGGACTAGT GGTGATGATATCAATGATGGCATTCCTAGCTTGTCCAGGGCGTTATCACATAAATCTAGATCAACTAGGTCAAGGCAAGC TGCTGTCAAGGTATCAGAAGTGAGTTCACTTTTGGGCAGAGCTGGTACAGCTGGACTTGGCAAGGCAGTAGAAGTTTTGG ACACATTAGGAAGTAGTATGACAAATTTGAATCTCAGTAGTGGCTTTACATCAGGCGTGGCAACAAAAGGAAATAAAATT TCAATTTTGGCCTTCGAAGTTGCAAACACAATTGTTAAGGGTGCCAATCTGATGCAATCTCTTTCACAAGAGAACATTAA ACATTTAAAAGAGGTGGTTCTACCATCTGAAGGAGTGCAAAATTTGATATCCAGAGATATGAATGAACTCCTACGTATTG CTGCAGCAGACAAGAGAGAAGAATTGAAAATATTTTCTGGTGAAGTTGTACGATTTGGAAATCGTTGTAAAGATCCTCAG TGGCACAACCTGGATCGCTATTTTGAGAAATTAGGCTCAGAGCTGACACCACAAAAGCAATTGAAAGAGGAAGCAGAGGT TGTGATGCAACAACTAATGACCTATGTTCAATATACAGCGGAATTATATCATGAATTGCATGCCTTAGACAGGTTTGATC AAGATTATCGGCGCAAGCTTCAAGAAGAGGACAATTCAAATGCCACACAAAGAGGAGACAGCCTTGCAATTTTAAGATCA GAACTGAAGAGTCAAAAGAAGCATGTAAGAAATTTGAAGAAAAAATCACTGTGGTCCAAAATTTTGGAAGAGGTGATGGA AAAGTTCGTAGACGTTGTCAATTTTCTGTATTTGGAGATACATGAAGCATTTGGTAGTGCTGACCCTGATAAGCAAGTGA AAGATTCTCAAGGAAACCATAAGAAGTTGGGATCTGCTGGTCTTGCTTTGCATTATGCAAACATTATCACTCAAATTGAT ACTCTGGTGTCTCGATCAAGTTCTGTGCCTCCTAATACGAGGGATACTTTATATCAAGGGCTGCCACCTAATGTAAAATC AGCATTGCGTACGAGGTTACAGTCATTTCAGGTCAAAGAAGAGGACATATTCTTGCAGCTTACTGTCCAACAGATCAAAG CTGAAATGGAGAAAACATTGCAGTGGCTTGTTCCTATTGCCACCAACACAACGAAAGCTCATCATGGCTTTGGATGGGTT GGAGAATGGGCAAATACAGGGTCTGACGTCAACCGTAAACCCGCTGGCCAAACCGACTTGTTGAGAATTGAAACGCTCCA CCACGCTGACAATGAAAAAACTGAAGCTTACATACTTGAACTTGTTGTCTGGCTCCATCACCTAGTCAGCCAAGTGAGAG TTGGTAATGGAGGAATAAGGTCACCAGCCAAATCGCCAATCCGTTCTCCCACTCAGAAGACAGGGCAGTTATTCACACAC AAAGGTTGCTCTACTTCTCCCATGTTAACATTTGAAGATCAGCAAATGCTTCGCGATGTCAGCAAGAGGAAACTAACACC AGGCATCAGTAAGAGCCAGGAATTCAGCACTGCCAAGACTAGGTTGAGCAAACACCATAGGCTTAGCAAGAGTAGTAGTC ATTCCCCAATCAGTGAAAGCAAAAATGACATGTTCTCTACAAGGAGGGTGCTGCCTTCTGTTCCTGTCATTGACTTTGAT ATTGACCGAATGAAGGCCTTGGATGTCATTGATAGGGTGGATACCATTGGAAGTTCTTGA
Protein sequence (LotjaGi5g1v0282300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGGICSRSWKATVDGVAVDNALDGSSRNANGHANNEPGTTYQTGHINSNSNLRPIDDESDKHQRESFSFSALDKVSYGTS GDDINDGIPSLSRALSHKSRSTRSRQAAVKVSEVSSLLGRAGTAGLGKAVEVLDTLGSSMTNLNLSSGFTSGVATKGNKI SILAFEVANTIVKGANLMQSLSQENIKHLKEVVLPSEGVQNLISRDMNELLRIAAADKREELKIFSGEVVRFGNRCKDPQ WHNLDRYFEKLGSELTPQKQLKEEAEVVMQQLMTYVQYTAELYHELHALDRFDQDYRRKLQEEDNSNATQRGDSLAILRS ELKSQKKHVRNLKKKSLWSKILEEVMEKFVDVVNFLYLEIHEAFGSADPDKQVKDSQGNHKKLGSAGLALHYANIITQID TLVSRSSSVPPNTRDTLYQGLPPNVKSALRTRLQSFQVKEEDIFLQLTVQQIKAEMEKTLQWLVPIATNTTKAHHGFGWV GEWANTGSDVNRKPAGQTDLLRIETLHHADNEKTEAYILELVVWLHHLVSQVRVGNGGIRSPAKSPIRSPTQKTGQLFTH KGCSTSPMLTFEDQQMLRDVSKRKLTPGISKSQEFSTAKTRLSKHHRLSKSSSHSPISESKNDMFSTRRVLPSVPVIDFD IDRMKALDVIDRVDTIGSS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 656 | 656 | 0.0 | – | |
PANTHER | 1 | 656 | 656 | 0.0 | – | |
MobiDBLite | 24 | 53 | 30 | - | – | |
MobiDBLite | 24 | 64 | 41 | - | – | |
Pfam | 162 | 218 | 57 | 3.7E-25 | ||
Coils | 315 | 335 | 21 | - | – | |
Pfam | 383 | 472 | 90 | 2.1E-33 | ||
MobiDBLite | 540 | 559 | 20 | - | – | |
MobiDBLite | 545 | 559 | 15 | - | – | |
MobiDBLite | 588 | 624 | 37 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0282300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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