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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0324500 |
| Transcript ID | LotjaGi5g1v0324500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF1764 domain protein; TAIR: AT5G11760.1 stress response protein; Swiss-Prot: sp|Q92346|YDH1_SCHPO Uncharacterized protein C6G9.01c; TrEMBL-Plants: tr|A0A151UAF8|A0A151UAF8_CAJCA Uncharacterized protein C6G9.01c; Found in the gene: LotjaGi5g1v0324500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64265051..64267679) extracted from Lotus japonicus Gifu genome v1.2.
ACCAAAAAATTAAAATTATATAATCCTGTGAACTTTAAAATTTCAACCTACTACGGCCCATTCTTAGCAGAGCCCAAAGT CGAATATTGCGTTGCCCTCCGTCGCCGCTGTTGGATTGTTGGTCGCGACATTGTCGCTCTGTGCCCACCATTGTCTTAGG TTCGGTATTTATACCTGTCACCTTCATGATTTTGTTTCTTCTGCTTACTTTGATCGTTGGAATTTGAATTCCATACAGTA GCATAATGATTGTGTTCAATGACCTGAGTATGGTGGTTTGGTTGTTTTGAACATTCACTTAGGTTTCATGCTTAGCAATT GATGCCGACCAACTGTTTGATGTAAATCCTTATCAATTGTTGCTCTCGTTCTATTTGATGTTTGTTTTCTCTTGCTTAGT CCTGAACCAGCTTGGAAGCATTGTTATTGTAATGAACTAATGAGACTATGTTTTAGGTGCGGTGCATTTGTTCAATCATT TGTGAATTGTTGCAGCTACTTTGTTGTAGAAGAGTAGGCTCGGTGGGCTTTAAGTGTGATGCTTTTATTTTTATGCTTAT TGATCATTTCAGTTCTAACAAAATTTGCAACATGGCATGCAGCTTTGTTTGCACTCCGATGACGAAGAAGAGTTCGAAAA CGACCCCTAGTTGGTTGCAAGAACATATTGTTGTGGAAGAGGCAAAACCCTCGTCTGTAATAAGGGCAGGTAATGAAATT GATGAAATATTTGCTGGTAAAAAGAGGAAAAAAGATGAAGTGGGGAAGAGTGGAAAACCTGATGAAGTAACTATGACAAC CGAGAAAGTAAAGAAGAAGAAAAACAATAAGAAGAAAACTGATAGGCCAGATGATGGTGAATTTGTAGACCGACCTTCGC GGCCAAGAAAGAAAACGCAGGATGGACTTTCCATTTATACTGAGGAGGAGTTAGGTATTAATAAACAGGATGCTGGAAGT ACCCCACTCTGCCCATTCGATTGCTCTTGTTGTTTTTGATGGGTAGCTGCACAACAATTTGCACTCTCAATTCCTTGGTT CAGTGTACAATGGTTTTATCATTCACTTACAGTTTTGGATTTATAAGCCAGGGCCCCAGGGGAGTTGCTTTTTCCTTTAT TTATGGTTGGGCTTCTGGCTTGAGTCATCTTGTCCTGAGGTTGAGTTCTTTAGATCTACATATGATTCCATATTTAGGTG GTCAAAGAGGTTACTGAAGTTTTGAATTTTGAAGCATGTTATGTTTCTTTCACTTTGTATTAAAGTATATAGTGAGATGA GATGTTGAAAATTCAAAGCAGCAACCATCTCATTTTTCTTTTGTTCTGTTTTTGCTAAAGTCATTGAAATGGACTGAGGA TGGGTACATCATTCATGCTACAAGTACCTGAAGATAGTGGAGAAAGTTGGAAACATAATGTAGCAAGTGCAAGAGGATGG TTACTTCTGTAAAAAGGTAATTATACCTTTACTACAATGAAATGTCTAACTCTCTTGCCTTTGATGTTTCTGTGTAAAAA TATAAAATTAATTTTTGTTTGAAAATTACAGCTTTAAGGTTTGCATTAATGCCTTCATGATATGTGATTAACATCTTTGT ACTTTTTTTATGCTGCTGCTCCGCCCCCTTATATTAGAAAATAAGCTTTTATGGAGCAAGTCATTATTAGTCTGCATCAG ACTATAGAATCCCTTTTAAACTAAAACTCTTTATTTTATAATGACAATATACAAATGTCAGGGACTTATGAGATAAGGTG AAGGCAACATTACACATGCACTTTCAACCTCATTTATATTTGAATGAAGTTTATTTTCTGGTTACATGAAAGCATGAAAT AGATACACTTGTATATTTGAATTAACTTCTATATTCTCAGACTCAATTTTAAAATATAGAAGCTACTCTCCAAAATTAAT TTTGTATAGTAGAATGATTTCCAAACATGGAATAATTCTTGTACGACGGAATCTCCCTTGATTAACTAGTGATACCTATT AGTGGGAATATTGTGGAGCATCAAGGTTGGGTGTTGGTACAGCCCACACCATGATCAACATTTCTGAACCAATAAGTGTG GGTAAAACGAGCAGCACCTTCTGGAACATCCTCCATCACACACTCATGGCCTTTTGGGTAGTAAATTCCTGTGCGTGGGT GTGGAACCCAGATTGCTGAAGAATCCTCTGTCTTCCCACTAATCTTTGGAACTTCTTCTTCAGAGCTTTCTGCAGCAGCT GCTTTAGCAGTAGTCCCTGAGAACTTCATGACCCTATTCTCTGCTCGGTTAGCTCCCCTGCATGACATTGACACACTTCA CTTGTTAATAAAAAATATGAACAGCACTATGAAACCAATTGATAAGAACTTTGTAATGCCTTTGAATTTGTCATTAAGAG ACTGATTCATGACAATTTACCGGAGAATCAGCAAGGTTGATTTGGTGATGCCACCTCTAGCCATGAGCTGCAAGTTGCAG TTGTATAATAATGTCTCAGATCTCAATACACTGAACTAACTTAACTGCCTTTGTTGCTTAAGCCTCAAGACCTTATGATG GGTATTTATAGTCTAGTGCTGCAAGTGAGGAAAGGATCCAGCATAGAATAAGTTCTGTTGCACGTGTGA
CDS sequence (LotjaGi5g1v0324500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACGAAGAAGAGTTCGAAAACGACCCCTAGTTGGTTGCAAGAACATATTGTTGTGGAAGAGGCAAAACCCTCGTCTGT AATAAGGGCAGGTAATGAAATTGATGAAATATTTGCTGGTAAAAAGAGGAAAAAAGATGAAGTGGGGAAGAGTGGAAAAC CTGATGAAGTAACTATGACAACCGAGAAAGTAAAGAAGAAGAAAAACAATAAGAAGAAAACTGATAGGCCAGATGATGGT GAATTTGTAGACCGACCTTCGCGGCCAAGAAAGAAAACGCAGGATGGACTTTCCATTTATACTGAGGAGGAGTTAGGTAT TAATAAACAGGATGCTGGAAGTACCCCACTCTGCCCATTCGATTGCTCTTGTTGTTTTTGA
Protein sequence (LotjaGi5g1v0324500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTKKSSKTTPSWLQEHIVVEEAKPSSVIRAGNEIDEIFAGKKRKKDEVGKSGKPDEVTMTTEKVKKKKNNKKKTDRPDDG EFVDRPSRPRKKTQDGLSIYTEEELGINKQDAGSTPLCPFDCSCCF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 126 | 126 | 2.7E-39 | ||
| Pfam | 30 | 126 | 97 | 7.8E-30 | ||
| MobiDBLite | 42 | 101 | 60 | - | – | |
| MobiDBLite | 42 | 64 | 23 | - | – | |
| MobiDBLite | 72 | 98 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0324500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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