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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013885
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.125s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj4g3v0462780.1
n.a. Uncharacterized protein TCM_037263 [Theobroma cacao] gi|508782606|gb|EOY29862.1| chr4 6962758 6967434 -
2 domain predictions
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Lj5g3v2111930.1
n.a. n.a. chr5 30200631 30202672 +
2 domain predictions
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LotjaGi4g1v0058000.1
n.a. DNA-directed RNA polymerase subunit beta; TAIR: AT5G11760.1 stress response protein; Swiss-Prot: sp|Q92346|YDH1_SCHPO Uncharacterized protein C6G9.01c; TrEMBL-Plants: tr|I1KLM2|I1KLM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0058000 LjG1.1_chr4 6988568 6992760 -
3 domain predictions
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LotjaGi5g1v0324500.1
n.a. DUF1764 domain protein; TAIR: AT5G11760.1 stress response protein; Swiss-Prot: sp|Q92346|YDH1_SCHPO Uncharacterized protein C6G9.01c; TrEMBL-Plants: tr|A0A151UAF8|A0A151UAF8_CAJCA Uncharacterized protein C6G9.01c; Found in the gene: LotjaGi5g1v0324500 LjG1.1_chr5 64265051 64267679 -
3 domain predictions
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LotjaGi5g1v0324500.2
n.a. DUF1764 domain protein; TAIR: AT5G11760.1 stress response protein; Swiss-Prot: sp|Q92346|YDH1_SCHPO Uncharacterized protein C6G9.01c; TrEMBL-Plants: tr|A0A151UAF8|A0A151UAF8_CAJCA Uncharacterized protein C6G9.01c; Found in the gene: LotjaGi5g1v0324500 LjG1.1_chr5 64266134 64267617 -
3 domain predictions
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LotjaGi5g1v0324500.3
n.a. DUF1764 domain protein; TAIR: AT5G11760.1 stress response protein; Swiss-Prot: sp|Q92346|YDH1_SCHPO Uncharacterized protein C6G9.01c; TrEMBL-Plants: tr|I1KLM2|I1KLM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0324500 LjG1.1_chr5 64266181 64267414 -
3 domain predictions
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