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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0354000 |
| Transcript ID | LotjaGi5g1v0354000.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aluminum activated malate transporter; TAIR: AT4G17970.1 aluminum-activated, malate transporter 12; Swiss-Prot: sp|O49696|ALMTC_ARATH Aluminum-activated malate transporter 12; TrEMBL-Plants: tr|I1NF40|I1NF40_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0354000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66953771..66957420) extracted from Lotus japonicus Gifu genome v1.2.
ACATTTTTTAATACTCGTTCCTTGTCACCATGTGCAGAAGCTTTTAAGCCTATATGTAACACACCCTTAATTTCAAAAAG GAAGCTTTTAATGATCATCTCACTCAGGAAGCTGATTCAGGAGTGAAAGTTTGAAACTTCCAATGGCTGAAACCAATAAC AGAAGTTCAAGTCATTGGAAATATATTTATAGTTTTGCTGATAAAGTGAAAAAATTTCCAGATTTAGCAAGGAGGACAGC ATGGGAGGTTGGTAAAGAGGATCCAAGAAGGGTGGTTCATTCTTTGAAAGTTGGTCTGGCTCTGACACTAGTTTCTTTGT TGTATCTGATGGAGCCATTGTTCAAAGGGATTGGCAAAAATGCTATGTGGGCTGTCATGACTGTGGTTGTGGTGATGGAG TTTACAGTAGGTAGGCTATTGTATGATTGAAAATGATTCAGGGGCATCCGAATAGCGCAGACACCTCGGAGACACCCAAA GTGAGAAAATAATAGAAGTGGGAGAAGTAACAGATGTGATAAGAGAGAGATAGAGAGAAAATTTGGGTGTTTGTGAGGTA TCTGCAATATTTGGGTGTCTAAGTATCATTATTGTTATGATATCTCAGTGACATTGTTTTGTGTTCAGTCTGTGTATTCA TCCTCTGAATGCAGGGGCAACTTTATGCAAAGGACTAAATAGAGGGCTGGGGACTCTGGTAGCAGGATCATTGGCTTTTT TGATCGAGTATGTTGCAGATGCCAGTGGTCAGGTTTTTCAAGGAGTTTTCATTGGTGCTACAGTTTTTCTTTTAGGTAAC CATTTTTTTACTCGTGAATGTAACTTCACTCGTAGTTTAATTATACAGCACTGCTATATGTTACAAAGAAAACAGCAAGA AATACTGACATGGTAAAACTAGCTGTGTTATTTAATAGAAATTATGGAGAAGTAGTGTAGTTAACATCCACTTCTTGTGT TTCGTATCATAACTTTTAGTATTTCCCTTTAACTATAATTTGAAAGGATGTAGGAGAATCACTAAAGATAGAGATAAGCT CTTTCTGTGTTGAATAACTGCTGTTGTTTCTTTAGTCCTGATTCTTTTATCAATACAATGCCACGAAAGTATTGTTTGTT GAAATTTTAAGACAAACTCAGTTTGATGTGTAAAACTTGAACCTATCACACAAAATACAAATATTTAGAATCACAGGTCA GAAGATAAACCACACTTCCCTGCATTGTCCATTAATGTGCTAATCTTAGGCTTATGTTTGTAATTTTAATTAATTTTCCT GGAACGTAAAGAACATAGGATGAAGTTTTCCTCATTTTTGGTTGGCAGGAGCTGCAGCTACTTATATCAGGTTCATCCCC TATATCAAGAAGAATTATGACTATGGTGTTCTTATATTTCTCTTGACCTTTAACTTGATAACTGTATCAAGTTACCGCGT TGATGATGTTTGGAGCATTGCAAAAGATCGAATCTCTACCATTGCCATAGGCTGTGGTCTGTGTCTTGTGATGAGCCTAT TGGTATTTCCAAACTGGTCAGGGGAAGACCTCCATAACTGCACCATATCAAAGCTTGAAGTCTTAGCCAACTCCATAGAA GGTAAGGTTAACTTTAAGCTTGAAGTATTGCTACTAATTGTTAAATGTGAAAAAGTTGCTTCATTTCCATTGCCTCATAC TATGTCATTGATCTCATGCAGTTTCTGTCAAGGAATATTTTTATGATTCGGAAAAACGAGCAACTCAAGATGATTCATTC GAGGATCCCACTTACATTGGTTACAAGGCTGTCTTAGACTCCAAAGCTAAGGATGAAACACTGGTAACTCACTACGGATT TGGGTTCTCTGTACTCAGGACATTTCTAAATTCACACATTCAAGTAAATCTTAGTCATCCGATCAAGATCGAACAACTTA TAAGTTTCATTAAGATCGGACAACTCAAATAAACTCGAAATCGGAGCCATATGATTTTCATTGAATGGCTCATATTCTTT GATTGTGTGAATTTTTTATTTCCTAACTGCAGAGAATCCAAATTCAGTCACTACTGGCCCTTTCTTGTAAAGTAAAACAT CAGACATGAGTGTTTTATGATAAGAAGATCTCATATAGAATTGTTGTGTGGAATTAAACAGGCATTACAAGCAAGCTGGG AGCCAAGATACTCAATATATTGCCACAAAATCCCATTGCAGCAATATGTAAGAGTTGGAGCTTCTCTTCGACATTTTGGT TACACTGTTGTAGCACTACATGGATGTCTTCAGTCTGAAATTCAGGTACTAAACCAACTAGTTCAGGAAAGAAAAATAAT AACCTAGAGTTTTATATGAAGCAAATAGTAAAAGAATGAACTAAATGTATTTCTGCTCTAATGATTTAACCTTCAAGTCT TACATTTTATGATTTTTCCTTTTTTTTTCAAGTTAATACATTTACCAGTTTATGTAGGTTATTATGCAAACTCTTTCTCC CAAAAATTGCTTCCACTTGCTTCTATAACTCCCATAATTGAACTCTGGATTATCTGTCATGTTATGGATAGCACATGGAT AACAACCACTTGAAATATCAATCATTGATTATGCTCTAGGATCTACATAATATTCAAGGTCTGCATTAACATCATTCTTT TGGCTGACACCATTACAATTATTGGAATCAAAACTAACATAAAGTATACTTTATAATTTGATGCTTATTGTCATAATTTG ATGATACCACATGTACTTGTTATTATTCAATATTTGATTCTTCAGACACCAAGGTCGATTCGGATCCTATACAAAGACTC TTGCATAAGACTTGCACGAGAAGTGTCAAAAGTATTGAGAGAACTGGCGAACAGCATAAGGAAAAAACATCAATTCTCCC CTCAAATACTCTCTTGCAATGTCAATGAAGCTTTAAGAGACCTTGACAATGCCCTGAAATCCCAACCTCAAGTTTTACTA GGCTCTAGGAATGGTAGAACCACCAACACGTCCTCTCCAACAATTGCACATCTTGAGCAAAAGTTTGAAGAAGATACTAG AATTTCATCATGGGGTATTAAGAATGATCACTCTGGAGAACAACCAAAAGCAGGACAAGCACACAAGAAGGTTTTAAGGC CACAACTGAGTAAGACTACAATCACTAGCCTCGAATTCTCAGAAGCACTACCCTTTGCTGCTTTCACTTCTTTGCTTCTG GAGATGGTGGCAATTCTAGATCATGTTATGGATGAAGTTGAAGAATTGGGGAAAATGGCACACTTTAGAGAGTTCAGGCA TGATGATGAGATTGTTGTGACTTGTGAAAGACCAAAAATGAATATAGCTCAGAATGACTTGGCTTCTTATGGAACAGAAT AGTCAGTAGAATCCTTAGGGAGTACTGGTGCATATTCTTCCTCAGCTTTTAATGCCGATACAATCATTCATGTGTGTGAG TGTGTGAGGGAGCTTACTCATTAGTCATTTTTATTGAGGTTGAGTGTTTCCACAGTTATCATGTCAAAGTCAGTTTCCTG AGTTTGTCAATATGTCTTGCTTCAATTGATTTAGTTAATTATTGTGAAATTAAATGATAGCTAGTTGTATAAAAAGATAT ATTCTTTGAAAGGGTATTATTATTTAGTAAATAAAAGAAAGTATTGTGCG
CDS sequence (LotjaGi5g1v0354000.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGAAACCAATAACAGAAGTTCAAGTCATTGGAAATATATTTATAGTTTTGCTGATAAAGTGAAAAAATTTCCAGA TTTAGCAAGGAGGACAGCATGGGAGGTTGGTAAAGAGGATCCAAGAAGGGTGGTTCATTCTTTGAAAGTTGGTCTGGCTC TGACACTAGTTTCTTTGTTGTATCTGATGGAGCCATTGTTCAAAGGGATTGGCAAAAATGCTATGTGGGCTGTCATGACT GTGGTTGTGGTGATGGAGTTTACAGTAGGGGCAACTTTATGCAAAGGACTAAATAGAGGGCTGGGGACTCTGGTAGCAGG ATCATTGGCTTTTTTGATCGAGTATGTTGCAGATGCCAGTGGTCAGGTTTTTCAAGGAGTTTTCATTGGTGCTACAGTTT TTCTTTTAGGAGCTGCAGCTACTTATATCAGGTTCATCCCCTATATCAAGAAGAATTATGACTATGGTGTTCTTATATTT CTCTTGACCTTTAACTTGATAACTGTATCAAGTTACCGCGTTGATGATGTTTGGAGCATTGCAAAAGATCGAATCTCTAC CATTGCCATAGGCTGTGGTCTGTGTCTTGTGATGAGCCTATTGGTATTTCCAAACTGGTCAGGGGAAGACCTCCATAACT GCACCATATCAAAGCTTGAAGTCTTAGCCAACTCCATAGAAGTTTCTGTCAAGGAATATTTTTATGATTCGGAAAAACGA GCAACTCAAGATGATTCATTCGAGGATCCCACTTACATTGGTTACAAGGCTGTCTTAGACTCCAAAGCTAAGGATGAAAC ACTGGCATTACAAGCAAGCTGGGAGCCAAGATACTCAATATATTGCCACAAAATCCCATTGCAGCAATATGTAAGAGTTG GAGCTTCTCTTCGACATTTTGGTTACACTGTTGTAGCACTACATGGATGTCTTCAGTCTGAAATTCAGGTACTAAACCAA CTAGTTCAGGAAAGAAAAATAATAACCTAG
Protein sequence (LotjaGi5g1v0354000.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAETNNRSSSHWKYIYSFADKVKKFPDLARRTAWEVGKEDPRRVVHSLKVGLALTLVSLLYLMEPLFKGIGKNAMWAVMT VVVVMEFTVGATLCKGLNRGLGTLVAGSLAFLIEYVADASGQVFQGVFIGATVFLLGAAATYIRFIPYIKKNYDYGVLIF LLTFNLITVSSYRVDDVWSIAKDRISTIAIGCGLCLVMSLLVFPNWSGEDLHNCTISKLEVLANSIEVSVKEYFYDSEKR ATQDDSFEDPTYIGYKAVLDSKAKDETLALQASWEPRYSIYCHKIPLQQYVRVGASLRHFGYTVVALHGCLQSEIQVLNQ LVQERKIIT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 3 | 317 | 315 | 4.6E-198 | – | |
| PANTHER | 3 | 317 | 315 | 4.6E-198 | – | |
| Pfam | 34 | 322 | 289 | 1.3E-131 | ||
| TMHMM | 44 | 63 | 20 | - | – | |
| Phobius | 44 | 62 | 19 | - | – | |
| Phobius | 63 | 73 | 11 | - | – | |
| TMHMM | 73 | 90 | 18 | - | – | |
| Phobius | 74 | 94 | 21 | - | – | |
| Phobius | 95 | 100 | 6 | - | – | |
| TMHMM | 97 | 116 | 20 | - | – | |
| Phobius | 101 | 117 | 17 | - | – | |
| Phobius | 118 | 122 | 5 | - | – | |
| Phobius | 123 | 143 | 21 | - | – | |
| TMHMM | 126 | 148 | 23 | - | – | |
| Phobius | 144 | 154 | 11 | - | – | |
| Phobius | 155 | 173 | 19 | - | – | |
| TMHMM | 155 | 174 | 20 | - | – | |
| Phobius | 174 | 184 | 11 | - | – | |
| TMHMM | 184 | 206 | 23 | - | – | |
| Phobius | 185 | 203 | 19 | - | – | |
| Phobius | 204 | 329 | 126 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Malate transport | The directed movement of malate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi5g1v0354000.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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