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LotjaGi5g1v0357900.2

Overview

Field Value
Gene ID LotjaGi5g1v0357900
Transcript ID LotjaGi5g1v0357900.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Glutathione S-transferase; TAIR: AT1G75270.1 dehydroascorbate reductase 2; Swiss-Prot: sp|Q9FRL8|DHAR2_ARATH Glutathione S-transferase DHAR2; TrEMBL-Plants: tr|I3SE57|I3SE57_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0357900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:67249126..67250584) extracted from Lotus japonicus Gifu genome v1.2.

ATGGCTCTCGAGATTGCTGTCAAGGCTGCTGTTGGTGCTCCTCATGCTCTCGGAGACTGTAAGCTCCTCCTTCTTCTTCT TCTTCTTCCACTCTCTCCCTTTTCTCTCTTTCTGCGTTTTGTTTCTGATTCTCTCTGGCAATTTTGTTTCCAGGTCCATT TTCCCAAAGGGTCCTCTTAACTCTGGAGGAGAAGAAAATCCCACACAAAATTCACCTCATCGATCTCAGCAACAAACCAC AATGGTATTGTACTCTTCTCACTGTGTCCAAATTTCTATTGGGGTGATGTTAAGTTTTAATGTTTTTGTGATTGGTAGGT TTTTGGATGTGAACCCTGAAGGGAAGGTTCCTGTGGTTAAGTTTGGTGACAAATGGGTGGCTGATTCTGATGTTATTGTG GGAATTCTTGAGGAAAAATATCCTGAACCATCTCTGGTTACTCCTCCTGAATTTGCCTCAGTGTATGTTCCTTGACCCTT TATTTTTGTGCTTTCCTAGTTTACTTTTTTGGTATCTGCAAATGTGAGGGGTTGTGGTTATGTGAAAGATACAAATAGTA CTACTCACTGTTGAGGATAAAAGGGGTACTTAAATTATGTTGTGTTCTAATTGTTAATACATTATCTGAATTGAGATGGT TTTTCTTCACTGATGAATTTGGCTGTGCACTGTGTTTACACTTGCAGGGGATCAAAGATATTTGGGTCTTTTGTGAGCTT TCTGAAGAGCAAGGATGCAAATGATGGAACTGAGCAAGCATTGGTTGCTGAGTTGAGTGCTTTGGATGAACATCTTAAGG CCCATGTATGTATAGGAATTCATTATAAATGAGTAGTAGCATGTTTTGATCAGCTTAATTAATATCCTCAGAATCAATTG TGACACCAGAAGCTAGCTACTCACAATTGATTTTGGCTCTAGATTCAATTGTAGGAGAATTTCCAAAAATGCACTAAGTT TTTGTTAATTGCTTTCTCTTTTGTACAAGCTAATTGGCTACACTAATAATATACTGGGGTTTTGGTCAGGGTCCATATGT TGCTGGGGAGAGGGTCACTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTAGTGGTAGCACTTGACCACTTCA AGAAATGGAGCATTCCTGAAAGTTTGGCACATGTCCACAACTATGTCAAGGTATGCTATTGTTTTCTGCACAGCGTGTAA TCTTTTGAGACTATTTAGTCATGCCTTCTGTATTGCCACTGAATAGTTGTTTGATTCGCTCACCGACAATAATTGGTATT TGGTAATGAGAATTTTTTATTGTCAAACTTATCATAGGAGCTATTTTTTGTTGTATTGTTTGTACTATGCTTTAAATTTC TTCAGAAGGACAAGTGTTTATCTATCTAATTTTAAATGTATTGGAGTCCAGATAAAGCGTGTGAAAGGAAGGTGATTATA AGTGATAAAGTAAACATAA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0357900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTCTCGAGATTGCTGTCAAGGCTGCTGTTGGTGCTCCTCATGCTCTCGGAGACTGTCCATTTTCCCAAAGGGTCCT CTTAACTCTGGAGGAGAAGAAAATCCCACACAAAATTCACCTCATCGATCTCAGCAACAAACCACAATGGTTTTTGGATG TGAACCCTGAAGGGAAGGTTCCTGTGGTTAAGTTTGGTGACAAATGGGTGGCTGATTCTGATGTTATTGTGGGAATTCTT GAGGAAAAATATCCTGAACCATCTCTGGTTACTCCTCCTGAATTTGCCTCAGTGGGATCAAAGATATTTGGGTCTTTTGT GAGCTTTCTGAAGAGCAAGGATGCAAATGATGGAACTGAGCAAGCATTGGTTGCTGAGTTGAGTGCTTTGGATGAACATC TTAAGGCCCATGGTCCATATGTTGCTGGGGAGAGGGTCACTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTA GTGGTAGCACTTGACCACTTCAAGAAATGGAGCATTCCTGAAAGTTTGGCACATGTCCACAACTATGTCAAGTTGTTTGA TTCGCTCACCGACAATAATTGGTATTTGTCCAGATAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0357900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MALEIAVKAAVGAPHALGDCPFSQRVLLTLEEKKIPHKIHLIDLSNKPQWFLDVNPEGKVPVVKFGDKWVADSDVIVGIL EEKYPEPSLVTPPEFASVGSKIFGSFVSFLKSKDANDGTEQALVAELSALDEHLKAHGPYVAGERVTAVDLSLAPKLYHL VVALDHFKKWSIPESLAHVHNYVKLFDSLTDNNWYLSR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.30.10
1 89 89 2.8E-30
IPR036249
PANTHER
PTHR44420
2 188 187 1.2E-101 –
ProSiteProfiles
PS50404
10 88 79 15.748
IPR004045
SUPERFAMILY
SSF52833
18 87 70 3.52E-21
IPR036249
SFLD
SFLDS00019
19 184 166 1.2E-28
IPR040079
Pfam
PF13417
19 87 69 7.8E-18
IPR004045
SFLD
SFLDG00358
19 184 166 1.2E-28 –
CDD
cd00570
20 77 58 5.15148E-17 –
ProSiteProfiles
PS50405
66 198 133 8.016
IPR010987
SUPERFAMILY
SSF47616
83 185 103 1.21E-18
IPR036282
Gene3D
G3DSA:1.20.1050.10
90 191 102 1.4E-37 –
Pfam
PF13410
117 184 68 6.3E-9 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0357900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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