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LotjaGi5g1v0358800.4

Overview

Field Value
Gene ID LotjaGi5g1v0358800
Transcript ID LotjaGi5g1v0358800.4
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Protein phosphatase 2c, putative; TAIR: AT1G43900.1 Protein phosphatase 2C family protein; Swiss-Prot: sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11; TrEMBL-Plants: tr|I3T109|I3T109_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0358800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:67330449..67334157) extracted from Lotus japonicus Gifu genome v1.2.

ACAGAACCTGAAGAACACGCCAACGCGGCCACCGTTGCCGGAAAATCCTCTGCCGGTTTTTCCTTTGATGATCATCTCGC ACCGCCGGCAGCTCCAAACATTGTCATGTCCTCCAAGGATCACGATTCTCTCTTCAGTGGTGGCGGTATCAGGTTGCTAT TTGGATTGCTTGATTCTGAGCTATTCTTTCTCTTGATTCTCTTTTCTATTCATTTCTGGATGTTTGAATTCATTGAATTG ATCATAGAAATGAACGGTGTCGTTTGTTCTTAAGATGGTTAGGAAATTAAGATAGCTGATTCCTGAAATTGGTTTCTGAA TTGCATTGTAAATTTTCAATGTCATCGTTTAGACTATATATAATTATGTGTTATGATACGACTATGTATACTTTGATATT TTTATGAATTATATACTTATATGTTATGACTATCTCATACTAGTTTTTGAATGATTGGCATTTGGTCTGCTCCTTCTTGC TATTGAAAAATGTTGAGAATGAATGACATTTTAATTTCTATATGTATGTTGCAGTTAGTTAGGTATTACCTTTTATGGCT TTACCATGCATCTTTCCTTTTATAAAGTAGGGTTGTCATAGCGCGCTAAAGCAGCGCTTTATGTAGCGGTGCCAGTGATT ACTCCTAGTCGTTGTGTAGCGGGGCAGTTTAGTGTAGCACGATCTTTGCGGCCGCTTAAGTGGAGGAAATTACGGGCAGC GCTATTTGGCGGGATTGATGAAAACCCAAAATATGCCCTCACAAAGTTAATGTTTTGGCATTTTTGGGAAGTGTTCACTC AGTTGAATGATTATTTGATATATACAGCATAATCTTTTCGGAACAGGGAAAATATCATGGAAAAGTGTGATGATGACATA ACTGTTTGCTTACTATTAACTGTCAATAATAGGAATCTTTTTATTAAATTTCTGTGAAGAAAAACCTGGGACTTGTGAAA TTTTGTTGCTGGACCGAGTGTAGTAACTTGGTAAAAACAATGGCTAATGGCAAGAATTTGTGCCAGACCTAGCTTGAGAG GCTGCACCAATTATAGGTGTCATAGGCTGGGGTGTTGAGCATAGTGAATCCTTGAGGTGAATTAAGCTGAACCCCCCCAA CCCCCGAAGTGCGTTGTTGTCCCTTTTGTGTTATATAACAGCCTTCCAACTTTCAAATATTTAAAAATTTGAAAATGAGT AACTTGCATTTATTTCTGTTTAGCCTTCTGTCTGGAAGTCGAAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGG TAAAAGATCTTCAATGGAGGATTTTTTTGAGACCAGAATATCAGAAGTTGATGGTCAGATGGTTGCCTTTTTCGGTGTTT TTGACGGTAAGTTTTAGGTTTTTATTTTGCATCCCTTAAAATTAATCCTTTAGCCTCCCCGCTCCCCAATTTTGTTTGAT GGGCTTGATGATTCTGTTTCCCTTTTGGTTTTCTGCCATCTTTATTGTCTTTGCTATTGGGTTTATTCTATTGGTGCGAT TCTTTCTGTCATAGGATCATTTGTGACTATAAGACTCTCTAAAGTAAACAAGGGTGTATTCCCAATTTAGATAATTTTAT GTGTATAATTATGTTAACACACTAAATTTTGTGGGTTGATATGCCCTTGTTCATGTAATAGATAAACTCACTTTAAAAGT CATTTTCAATATGTTATGGGTTTATGGTGGCTATTGTGTAGGTTTTGAATTTGTTGAGGGAGGGGTTTAAGGTTCCGTGA TTAGGTTAGAAATTTAGAAGTGACAGAATAGCAGAAATAGGCATGATAGATGATCGCCCGTTGGAATTATTAGACAGAAG CAGAAATAGGACTTGTAGATTGAGGAAAAGGAATTTATATAGCGGCTGATGATATGGCTTATGGTTCCTGATTAGACAAG CATTCCTATAAAATTGGGAGAAGAAAATCAAATTACTCATAACAATGATTGTATCCAATCATTTTATGATCAGAAAATGA AAGAAAGTCGCCAATGCTCAATACAGCAAAGATGGAGCTGTAATACCCAAACCTTTTTGGGGTTGATTTTCAATTCCGTA ATAAAATTGGAAAGCATGTAGGTTATTTCATATTGGCATGTCCGTTTCGTGCATATCTTTGACGTTATTTATTTATTTTA ATCTTTTTAGGTCACGGAGGTTCTCGGACTGCAGAATACCTGAAAAACAATTTGTTTAAGAATTTGAGTAGCCATCCCGA TTTTATCAAAGACACCAAGACCGCAATTGGTAGGAGCTTCATTTATCTAAAATTATATATGTAGTGAAATTCTCATATAA CATTATAGTTGTGTGGTTTGTTACCTGGATGGTCTAAATATGAACATATGTTTGTTCTAATTGTTTGTCTTGTTACAGTT GAAGCATTTAAACAGACAGATGTTGATTACCTCAATGAGGAAAAAGGACATCAAAGGGATGCTGGGTCCACTGCATCAAC AGCTGTATTGTTGGGTGACCGCATTCTTGTTGCAAATGTTGGCGATTCCCGAGTAGTTGCGAGTAGAGCTGGTTCAGGTT GGTGCCATGTGAATTAGGGGTGAAAGAATTAGATTTACATTGGGCAGGATATGCATTTTTAATTGGGTGGTGAATGGAGG GATATGCAACATATTTCCTTTCCCTGTAGTACACTGTCAAACATGGTTTTTGGTTATGTCAGTTTTGCTAAGTTACGGGC TTCATGCTTTTGCAACATACACTAAAATTTCAAATTGCTTTTAGTAGTTTTTTTGTTGAGATCCTACATCGACTAGAAAT ATGACTGAAGTATATCTTAGCTAGGACATTGGGTCTATGGGTTTCTAATCTTTTATCTAGCTCATTGCTAACCAATGTGG GCTTCAAGCTCACACTTGAGTTCCCAACACAGCTCAAGAAGCAATATAATTTCCTATATCCGTCCCTCCTTTCCCCCTAT TATCTGATATAAATGTTTGTGTTTCACTGCAGCTGTTCCTTTGTCCGTTGATCACAAACCTGATAGATCTGATGAGCGTC AAAGGATTGAGCAGGCTGGGGGATTCATAATTTGGGCAGGTAAATGTCCATCCTTTATGGGTGTTTCCTATTTTTTATGG TTCATAGTAAATTACTTTCTCTATTGCTGGTTAATCCAGGAACCTGGAGGGTTGGTGGTGTTCTTGCTGTTTCTCGTGCA TTTGGAGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAGGTTGCCTAAGATCTTAAGTTTTGTCACCC TTTGCCATACCTGTGTTGTTATAGATCTTCTATCCGCTAACTTATCCCCCTTTTTGGCACTGGTTTGGCCCAGGAGGAAG AGATTGATGGTGTAGATTTTATAATAATAGCTAGTGATGGTCTTTGGAATGTCATATCAAACAAGGTGAGGCTGGAAGTG TTTATTTTGAAATTTAAATTTGTGTTCTCGATTTTATTAGTTATTTTTTAGGCCTATGAATGTTAACATTTTAAAGTAAT TTGGGAAAAAATTCTTCAATGGAACCTAAGCATCTGATTATGCCATCCCTGCCTTTTCAGGAAGCGGTGTCTTTGGTACA AAATATCACAGATGCGGAAGTGGCATCCAGAGAACTAATTAAAGAAGCATATTCACGAGGAAGCTCAGACAACATCACTT GTGTTGTTGTTCGATTCGATCTATCCTGA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0358800.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAAGAAAGTCGCCAATGCTCAATACAGCAAAGATGGAGCTGTCACGGAGGTTCTCGGACTGCAGAATACCTGAAAAA CAATTTGTTTAAGAATTTGAGTAGCCATCCCGATTTTATCAAAGACACCAAGACCGCAATTGTTGAAGCATTTAAACAGA CAGATGTTGATTACCTCAATGAGGAAAAAGGACATCAAAGGGATGCTGGGTCCACTGCATCAACAGCTGTATTGTTGGGT GACCGCATTCTTGTTGCAAATGTTGGCGATTCCCGAGTAGTTGCGAGTAGAGCTGGTTCAGCTGTTCCTTTGTCCGTTGA TCACAAACCTGATAGATCTGATGAGCGTCAAAGGATTGAGCAGGCTGGGGGATTCATAATTTGGGCAGGAACCTGGAGGG TTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGAGATAAACTTCTTAAGCCATATGTTGTTGCTGACCCAGAAATTCAG GAGGAAGAGATTGATGGTGTAGATTTTATAATAATAGCTAGTGATGGTCTTTGGAATGTCATATCAAACAAGGAAGCGGT GTCTTTGGTACAAAATATCACAGATGCGGAAGTGGCATCCAGAGAACTAATTAAAGAAGCATATTCACGAGGAAGCTCAG ACAACATCACTTGTGTTGTTGTTCGATTCGATCTATCCTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0358800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKESRQCSIQQRWSCHGGSRTAEYLKNNLFKNLSSHPDFIKDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAVLLG DRILVANVGDSRVVASRAGSAVPLSVDHKPDRSDERQRIEQAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQ EEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYSRGSSDNITCVVVRFDLS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
SMART
SM00332
1 221 221 4.9E-69
IPR001932
ProSiteProfiles
PS51746
1 223 223 44.751
IPR001932
PANTHER
PTHR13832:SF634
13 224 212 2.5E-127 –
PANTHER
PTHR13832
13 224 212 2.5E-127
IPR015655
Pfam
PF00481
14 216 203 1.3E-56
IPR001932
Gene3D
G3DSA:3.60.40.10
14 225 212 1.1E-74
IPR036457
CDD
cd00143
16 223 208 6.66664E-80
IPR001932
SUPERFAMILY
SSF81606
16 224 209 5.36E-65
IPR036457

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0004722
Molecular function Protein serine/threonine phosphatase activity Catalysis of the reaction: protein serine phosphate + H2O = protein serine + phosphate, and protein threonine phosphate + H2O = protein threonine + phosphate.
Subterm of
GO:0006470
Biological process Protein dephosphorylation The process of removing one or more phosphoric residues from a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0358800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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