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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0053100 |
| Transcript ID | LotjaGi6g1v0053100.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein XRI1; TAIR: AT2G01990.1 XRI1-like protein; Swiss-Prot: sp|Q6NLW5|XRI1_ARATH Protein XRI1; TrEMBL-Plants: tr|I3SEF6|I3SEF6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0053100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9474354..9478834) extracted from Lotus japonicus Gifu genome v1.2.
ATATGATGTCACATTGTTGCTCTTGTACTAAGCATCCACCACAGAAAATCTGCAAAATCCGGAGGTGACCAAAATGTCTT TATTTTCTGGGATAATTAAAGACCAGCTTCCTCAATATGATCAGACCAAAAATCTTATCAATCAGTAGTTCCAATTGCAT ACTCAACACTCTAGATAAAGTAACCTATTTATTATTTTGATTTGCATTGACTAATATATGGTTAGGTAGGTGGGTTTTTT GAGAGTTTATAAAGGGCCCCATTTCAATAATTTTAAGTGAAACACAGTAGTCAGTTTGTTCAGATATATGAATGTTCTAT TAACCTGCATACAAGAGTTCTTGACCACACATAATTGCTTGTGTTCTCACTGCCCTTCCTCCATGGAATTGGAGATTGGA GGCACTCATTCAGATCTCACTCTTGGTATATATGTTATATCCTTTTAAGTTACTCTTTTATTTTCAATTTCTTTGTGGAT GCTTCACTTGTTTCCAAGTAATGCTACTAACGGGCACTGAGTACCCGAATGGATGCAAACCAAATAGTATTTATTGGAGC TTATTTTCTGCATTTTCTAATAGATAAGTTCCTATAAGCTTGTACTCAAACAGGTTCTAATTCTACTTGTTTCTGACCCT AGTTTGCTTATTATGCCTGTATGTTGTTGCTGTAGTAGAGTCATGGTTTGCTTCTGATGCATCTACTGGGTATCTTGAAG ATGCTATTGTTGGCTGGGATATTTGGTGCAAGCAGCAAACCTTACCATCCTACTCTCAAGATCAAAAGGTTAATTAACTA TGCAAGGGTTCATGTACTTTACACTTGCTCAATTGTAATTCCCATGTTTTAATTGTTAAATATTTTGAAACTTGATAAGA TATTTAATTAATTACAGAAAAGCCAGTATTTGGTTGGTCATGAAGATCCATTTCCAACATTTTCTTCCACAGCAGCTCAA ATGCTTCATGGTATCCCCTGTTATCATTTTCAATCTAGCATGATTTTGGAAATAAGTCCTTTTATTATATTGTTCATGGT TAGAAATGTAGTGCAAAATTATCTCCTTAACTGTTTGGATACAGATTATGTGGCCATAAAAGGAGTTTAGAATTTGCAAT AAATTACAAACCTAACATTTCCACTTCAGCCTATAAATTTGTTACTAAGTTTAGTCTAAGTGGAATTAATTGAAGCATAA CAACCACTTACACTGCAGATTATTTCTTTCCATGCCAGACCATAAAAAATTCATCACTAGGAACCTATCATCATCACAAA ATCAAACACATGCAGCTGCAGCCAAACATGATTCTGCTCAGAAGAAGTGTGCATCTACAGAGTCATCAGATGAGAATGAT GCTTCAGTTCCAAGTACAACATTCTTAAAGAGGAGTTACTTGATTTAGTATTTCATTCCTCTCTCACCTCAGCATCTTTA TCTTTTATTTTGTTTTTAGAGTAACAATTGTTCACTCAAGTGTCCTTCTGTCACTTTTCTCTTCAGGAGGTTCTTGGAAG AAAATAGCTTATCCATTTGAGTTGGTGAAGCCTGGAGGAGTTGAAGGGGAAACAACACTCAAAGATATAAACCACCAGAT GCTGATGAACCCATCAAAGCCAATTCCACACCCTGTAGGAGATCTTGTCACACATCCCTGCATTTCAACAAGTGGGTTTG GTATCTCAGGAAAAAAAGTTGCAGCCCTTACTAGGATTCACACCAAGGGTAGAGGCTCCATTACCATAGTTAGGACCAAG GGTTAAGTCCATGTCTGGAAACCCTTATACCATTGATTATGAATCCAGAATCAATTCGAGGGAGAAGCTGAAGCTGCAAA CAAGCTATAAATAGAAGGGAAAACTCTGTATAATATTGTGTCCTTGGTTTTTGTATCATAGTGTTAGTTTATAGGAAATA TACTAAATGGACTGAAAAAAATAGCCAAAGGTGTGTTGTAGTGTAAATTCAATTTGAAATTTTGAAAGGTGAGTTGTTTT GATGAAAAATGTTCCCCAGTCCTTGGCTCTGAAATATTGTTCTGGTTCTTCCAGGTTTTTTTTTTCCATCACGATACAAC AGGGCTACATATTTAGGCATTTCAACCAGCCAATAGATTTGGTCACGGCGACACAAGTTCAATGAGTAGGTCAGTAGTCC AATCACATATACTGATATGCAATAGCTAATAATCAATAATCAATAATCAATAATGAATAGTATAGAGTAGTTGAGAAAAA TTGAAAGCCATCCATGGAATAATTGTCAATCAACTGGACAATCGGTTTTATATCTATTAAATACTTATGTAATTTTTTTT AATTAGTCGGGTAAATTTTAAATACTAGTTTTAGGAATGTAATATATCATAATTGGTGGCGGCTCTAAAATCGGCCCATT TCCCTCTTTGGGCAGGTGTTTAAGGCAGTTTATTTCTCTCAGTGATCTTAGGAAGTGAAGAAAGTGTTGTGATATCAAGT GTGAGTAAGTCTCACATTAGAAGATAATGACAACTTTAAACACTATAAATGAGAAGGTTCATACACCTAAGGTCTTAAGG TTTTACACTTTGTTTGTTAGAAGAGAGATAGAAAAGAGAGAGATGCAAGAGAGAGAGATAGGAGAGAGATGGAGGAAGTT ACCTTGTTTGGTAGAAGAGAGGAGGGAGGGGGTTACAGAGGTGAGGCCCACCCCTTTTTTTGGGTATCTCCAATTTGGAG AAAAATGGAACAGTAACAAGGGGGCTGCGTTTTTTTTTTCTTCTAATTTTGGCTACTTAGTGGCGGTTTTAAACCGCCAC TTTGTTCATTTTTTTCAAAAAAATATTATTTTAATCAAAAGTTAATCTTTTATCTTTTTTCCACCTCATTATTTCTTATC TCTCTCCTTTATCTCTATCATACCAAACAACCTCTTAAATCCACTTTATTTCTCACATATTTCTCTCTACTCAATCTCTC TATTCTCTACTCTCTCTTCTCTATCTCTCTCTACTCTACCAAACATAGTGTTAGGGTATGTCATTTTCAATTCACTTGTG GTTTGCTCTTTAGCCCAATGCAATGATTCACCGTAGTTTTAATCATCTCATTGGTATAACAATGGTATCAGCTGATGCTT TGTTTGACCACGGTGACGACTCTTTGTATCGAAAGTATTCCTAACAATTTTGTGACTAGCGATGTGTCTCATTGATCATC CCGACGACGAAGCAAGTATTTGGAGGCTTCCGCTTTCGCTTGAGATAGAATCATACTTGAAGGGGAGATTGTTGTGATAT TAAGTGTGAGTAAGTCTCACATTGAAAAATAAAGAAAACTTTGAGCACTTTATAAGTGAGAGAACTTCCTTGTGATCTAA CATTCTTGCCAATACATTATCTTCATTCTACTCAAGATTGTAATCTCGAATAAAAAATATATCTTTGTGAGCAAATGCCC ATGTGATAATGACACATACATCCGATGCATTAATGTTTTGGGTAATTATCTCATTTGGTCCAACAATGGTATCAGAGCCG ATAATTGGCTTGACCATAATGACAACTCCTTGTATCGGAAGTCTTCATAGCTATGTTGTGACCACTGACGTATCCCCTTG ATCATCCCAATGGCGGTGCTATTATGTGGAGGCTTCCGTTTTCTCTTAACATAGACTCACATTTGGAGGGGAGATTATTG TTGTGAAAATACTAGAGTGTTCAAGGACTAGTATGTAATAAAAGCAAGAGTTCAAGGACTCATTTGTAATAGTTAGTAGT TAGTCGTTTCCAGCTGTCAGTTTGTTAGGATGGTTATAACTACTGTTAGTTAAGGGTTTACCATATAAATAGTGCTTAAC ATAAACACTCTGTAATCTGAATATTCATTTCTACAAGATGCAATACAATTGATTCTTCTTCTTCCTTGAGCTTCCTCTGA AAGCTAGGTTAAGATTTCTGTTATGGTATCAGAGCATAATCATCAAAGCTTCCGCAATCTGCAACAATGGTGAATCGTCA GAATCAAAATCAAAATCCTCAAGTGGTGCTTGATCCTGCTCAGAATCCCGCATCACCTTACTATATACATTCCAGTGATA ATCCTGCAGCAACAATGGTGAATCCACCTCTGAATGGGAAGAACTACAACGCTTGGGCAAGATCGATGAAGCGTGCTTTG GTCGCGAAGAACAAGTTTCGATTCATCATCGGTGAAATTCCAGTACCAGCAGCAACTGATGCAAACTTTGAGGCTTGGGA TCGTTGCAATAGCATGATTCATTCATGGATTCTTAACTCGGTTACAATCTCTATAGCAAATAGCATAGTTTTTCTTGAAA ATGTATGTGATGCTTGGAGAGATTTGCGAGATCGATTTTCTCAAGGGGATCTAGTTAGGATCTCTGAATTGCATAATGAA ATCAGTAATTTGAAGCAAAATTCAAAGTATGTGAGTGAGTATTATACTGAGTTGAAGATACTCTTGGAGGAATTGGAACA C
CDS sequence (LotjaGi6g1v0053100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGTTCTATTAACCTGCATACAAGAGTTCTTGACCACACATAATTGCTTGTGTTCTCACTGCCCTTCCTCCATGGA ATTGGAGATTGGAGGCACTCATTCAGATCTCACTCTTGTAGAGTCATGGTTTGCTTCTGATGCATCTACTGGGTATCTTG AAGATGCTATTGTTGGCTGGGATATTTGGTGCAAGCAGCAAACCTTACCATCCTACTCTCAAGATCAAAAGAAAAGCCAG TATTTGGTTGGTCATGAAGATCCATTTCCAACATTTTCTTCCACAGCAGCTCAAATGCTTCATGACCATAAAAAATTCAT CACTAGGAACCTATCATCATCACAAAATCAAACACATGCAGCTGCAGCCAAACATGATTCTGCTCAGAAGAAGTGTGCAT CTACAGAGTCATCAGATGAGAATGATGCTTCAGTTCCAAGAGGTTCTTGGAAGAAAATAGCTTATCCATTTGAGTTGGTG AAGCCTGGAGGAGTTGAAGGGGAAACAACACTCAAAGATATAAACCACCAGATGCTGATGAACCCATCAAAGCCAATTCC ACACCCTGTAGGAGATCTTGTCACACATCCCTGCATTTCAACAAGTGGGTTTGGTATCTCAGGAAAAAAAGTTGCAGCCC TTACTAGGATTCACACCAAGGGTAGAGGCTCCATTACCATAGTTAGGACCAAGGGTTAA
Protein sequence (LotjaGi6g1v0053100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNVLLTCIQEFLTTHNCLCSHCPSSMELEIGGTHSDLTLVESWFASDASTGYLEDAIVGWDIWCKQQTLPSYSQDQKKSQ YLVGHEDPFPTFSSTAAQMLHDHKKFITRNLSSSQNQTHAAAAKHDSAQKKCASTESSDENDASVPRGSWKKIAYPFELV KPGGVEGETTLKDINHQMLMNPSKPIPHPVGDLVTHPCISTSGFGISGKKVAALTRIHTKGRGSITIVRTKG
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 15 | 232 | 218 | 2.4E-103 | – | |
| PANTHER | 15 | 232 | 218 | 2.4E-103 | ||
| MobiDBLite | 112 | 146 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Male meiotic nuclear division | A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline. | ||
| Biological process | Female meiotic nuclear division | A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the female germline. |
Expression pattern of LotjaGi6g1v0053100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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