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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0061300 |
| Transcript ID | LotjaGi6g1v0061300.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | XH/XS domain protein; TAIR: AT3G12550.5 XH/XS domain-containing protein; Swiss-Prot: sp|Q9LHB1|FDM3_ARATH Factor of DNA methylation 3; TrEMBL-Plants: tr|I1MZC5|I1MZC5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0061300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:11146264..11153471) extracted from Lotus japonicus Gifu genome v1.2.
TGCAAGAAGCTCGAAAAGAATTGATTGATGTAAGTGTGCATTTTCAGATATATTTTCCATTTCCAGTTTACTGATTCTTT TAATTAATTTGGAAGAGCACCTGTTCGACAGTATCCAGTTTTATATTTCTTTCATATGTGAATCATTGGCTGGTAATGTT TTTGTTAGGATTAATTAAAATAGATTAAATCCTAATATAATTAATCCTAACAGTTTTGTATGCTGATTTTACTTTAGAGT TTGAAGTGTTATGAGTTGAAGTACACGTGGCATAAATTCACATTTACTTATAGAACACTCCTCTGACCTCTTCTTTGTTT CTATCTGGTCTCTCTATGTTGATATCTTTTATGGTTCAGAGCAAGGTAGTAAAGTGACTAGAGAAAAATTAAAATCTCGT TGTATCCATTTCATCTAATTGATTTATTATTCAAAGTGTTATTAATGGCCGGTCTGATTATGCAGATGAGACCTAACTGT GATTATGTTGATAACTGGACATCCATTCACTGCTTGTATGTTACATTACTTTCATCATGGGTTTATCTCTCTTGCAGTAC ATTAAAGAGACGTCATTTCGATCCCATATTAAGCTGAAGAGAATGGGGGAAATGGACACTGGACCATTCCTCGAAGCCAT GAAGAAAAGATATAATGAAGAGGAAGCTGAAGAGAGAGCTTCAGAACTATGTTCATTGTGGGCAGAATATCTGAAGGACC CAGATTGGCATCCATTCAAAGTTGTCATAATTGAAGGGAAAGAAAAGGTATGTCTTTGTTAAACATATAAGTCCCCCTGA ATTTATCCTGAACTATACCTGTTTCATTGCAATGCATATCACTCTGAATCAAATTTGGTTTCATCACCTCTTCATTAAGA AATGAATATTTGAAGGTCAGTGTACTTTAGATTAATGCTATATTAGGCCTTCTTAACTTTCGCCTAGTGTAAGCTAAGGG CATTCTTTATATTGATCCTTGTCCTTTAGTATATGATGTATATTGAAGTAGAGGAAGGTTTGTAGTATTAGAAATGTCAT GAGGGGATTAATAGTGTTAGAAATATAATATAAAACCATTCATCTGGCCCTTACCCAACAGCTGAAGCTTTTGAGATAAT TGGTTGTTTGATATGGTATCAAAGCCTCTATGACCAAGTGGTCTAGAGTTCGATCCTTGCCACCTCCCCCCCCCCCAAAT TATTTTAAACAAAAGTGGAATTTCAGGACATGGTAGGTGGGCCTGTGCATTATCAACGCTTCAAGCCCAAGTGAGCTCTT GCGTGAGGGAGCGTGTTAGAAATATAATATAAAACCATTCATATGGCCCTTACCCAACAACTTAAGCTTTTGGTATAATT GGTTGCTTGACAAATAGGAAAAAGAATAGCCAGACAATCATGAAAAGGGGCTAACTTGTCAATATTTTGTAAACCTGGAA AGGTTTGAACAGCTTACTTTGCAAAATTCAAATACGAAAATGATGATGCAATTAGCATTATGTGGGGTGAGTAGTTTTAC GTGTATCATTCTTATAGATCCTTGCTACGAGGGTGTGTTGTACAAGGAAGGGGTAGCACATAGTGGACAAGGAAGGATAC TATGTATAAAGGGGGAAGATTATGCTGATTAGAGCATAAGTGAATACCAAGCTAATAAGCATCTTTTCACCCTTAACTTT CATTCTTCCCCTATTGCTTTAGTACATTTATTTACAAAGTAGCAATTTTATCTAAAAGGGTTTCATATCCATTTTAATCT ATAATTATCCTGCAATATTTTGTCTAATTTCTTTGTTAAAACTCTTAAAGCATGCCCTTTTTTATCTGGTATCACATTTT TTTCATTTCAGGAGATTATTAAAGATGACGATGAAAAGTTGAATGGGCTAAAAAATGACATCGGTGAAGGGGCGTATAAA GCAGTGGTGACTGCTTTAACAGAGATAAACGAATACAATCCCAGTGGGCGATACATAACCTCAGAATTATGGAACTATGA AGAGGGAAGGAGAGCAACTCTGAAAGAAGGAGCGCAAGTTCTGTTGAAGCATTGGGAAATGGTTAAAAGCAAGAGGGGAA TGATGTGAAGGTTTGTATTAACTAGTTACTATATAATGTATTTAGGCGACTGTATTTTTCTCATGAACTGTATTGCAAGA ACTCAAAGAAGGTTTTTTAAAAGGATAGATTACTGCTTTTGATGTTTTCTTTAGAAACTACCAGTTGATTTATAGTAATC AGAATCCCCTCCCTCCTTTTCTTATTAAGATCATCTCATGTCACATAACATTGTCATACGAAACATTCTCTTTGTAAATA TTCAGAAGGTCCCACCTATTTAATACTTATGAAAAAGGAGACAGACTCAATTTCAACATGATTATGTGATGTGAAATTTA CATATGACAGATCATGATTCCCCTTTTCACTTGATTACTGATAGGCTTAATTGCAATTTTGGTCCCTGACGTTTACCAAT TCCACGATTTTAGTCCCCCACCTAATTTAATTACACGGATGGTCCCTGACTTTGTTGGTCGTCTGCAACGTTGGTCCTGC CGTTTATTTGTTAACGGAGGAGGCTTACGTGGATGTCCAATTGGAGAGAGAAAGAAGGACTGAAGAGAGAGGGAAGCATG CGAGTTGCACGTGAGACCTGCAACGATCATCTTCTACCCTCTTCCTCCTTAAAAAACAGAGCACCGTGAGGAAGATGTTT CGAAGCTTGAGATTGAGCGAAAAAGGAAGAGATAAAGAACGAACGAGTCCCTGGAGGCAAGGAAGAAGATTGAATCAGTT GCTGGTCTCTTTCTCTCTCCAATTCGACTTCCACATCAGCTAAGTGACCATCCACGTAAACCTTCTTCGTTAACAAATAA ATGAAAGGACTAATGTTGCAGACGACCAGCAAAGTCAGGGACCATCCGTGTAATTAAATTAGGTGGGGGACTAAAATCGT GGAATTGGTAAATGTCAGGGACCGAAGTTGCAACTAAGCCTTACTGATACAGTTTTAGTTACATGTCATATAACTGTTGA TGTTATTGCTGAAAGGTTGATTGATGTTTGTGATAGGAACAAGCATGATGCATTTGGAGAGATAATTTCTGCATCACAGC TGGGTTTCAAGCATCCATATTTCCAAAGCTGCGAACCTAAAGGTTGTCTTTGACTATGATAAGCTGTTGGTTTTTACTAG AAATTAGGGTTCTATGGGCGTCTTGCTGAGAAACAAACTGCAACAATAGCGACAGCCCTTATACTATTTCAAGCATGGGA GAAGACATTGATGTTAAACTTGTCTTACTTTACTAACCATTTATTTTTAGCATGTTTGTTTGATTACTTGCATTTTGGTA TGACTATATTTTCCTGTCTCTATGGCTATGTTTGGATTGGTGGGATCTGGTGAATGGAATGTGCCATTCTATTCTATGGC GTGTTTTTGTTTCTCTTCGTCGCATGCTATTATTATTTTGTGACTTGAAAAGAAGCTTTCAATCAATAACGTGATTGAAT TATTCTGATTGATTATTCTATGACTGAGCTGCCTAATTATCAGAAATGAGTGTCACCTACGTAGTATCCCCAAACCTTAG CTCTTTAAGTAGCTGTTTGGGCCATATTAGTTCACAGGTGGCAGAGGCCATGGCAACTTCTACACTTGATCTTGCCACTA TAGTTTATTTCTTGCTTTTCCATGAAATCAAGTTGTCACCAATGAAAATACAGTAGGCAGAAGTGGATCTCCTGCCAGTA CGAGAGTCTGCCCAATTTGCATCAGATTAACCTACAACTCGTGCATGACCTTTGTCTTCATACAAAAGACTGTTCCCGGA GCTCCTTTAATATATTTTAGAATGCAGATTATAGCATGTCAATTTCCTTCACAACAAAACTGGATCTACCAAACAATGTC CTTGGTGATTGTTTCAGATATAAAGATTTACGGAGATGACATACTAGTCCAGATGACTCCCCCTAAGCAACAAGCCCATG AGGTTTCTCCATATACACTTCTTTAGCCAGATCACCATGAGGAAAACATTTTTCACATCAAGCTGGTAAAGAGGCCGGTG AAGAATAGCATCCCTAGATAGGAATACTAGAATAGAGGCCATTTTAGCCATTGGAGAGAAAGTGTTACCATAATCCAAGC CAGATATTTTTGTGTACCCTTTCGCAACCAATCGGGGTTAAGTCTATCAACCTTGTCTCCATGACCAATTTTCACAGTGA AAACCCAACTGCAACTAACAACAGATTTCCCTGAAGGAAGGAGAAAGAGGTCCCAAGTACCATTGTTCTAAAGTGCATAC GTCACACGTCTGCTTAATAAGTAGTATATTCCTTTTACTTTGGCTTGAGGAGCGAGGCTTTTGCTTCACATTTTATCAAG GCTTTTGCAATGCTTGTGCAACCAATCCCAATTATCTTACATAAATTTAAACATACTTGCGGTTACCTCATCTCTTCCAA TGTCTCTCATAATATAGTAATTTATCATCTACCTTAATAAAGTGAAATATATGATGATTATTTTTTTTTAAGTAAACGTT AATGGTTAGTAATGTTAATAAATTAGTCATCCATCAAGATTCGAACTCTGAACTTTTTTTCTTTATTTCCTCCAACCCTT ATGTCTCATAATTCCTACCATTTGAGCTAATCTTGAGGGACAAGAGATATGATTAATGATGTGATGAAAAACAAAAGAGA TAAAAAAAATGGAAGAATGTGAAAGTAATATGTGAGAAAGAAAAAGTGTGTGAGTATATCATGACTCTTGGATTTCTCAC AGTACCTATTGTAAACAATGTGAAATTATGAAATGCAACGTTTTGAATGCGTAAGGTCACCATCATGAACCCATAAAGTG AGAGCATCTGCTTTTAAGGTTCCAACATTGCTCCAACTCATTCTACACTCATCACTCTTCTCAGGTATTATTTGTCTTTG CACATTTTTCAATTAGGGTTTGTCAAAACCAAAAATCAAACAAATAACTACTCCTAAATTTGCAGGTACTTTGAAATTTG CATGATCATGGCAAACACTAGTCATGAAGGGGATTCCAGTGAGCCATGTGAGGGTTTGGTAAGCTTTCAGAAGGAAACTG AACCCCAGAGCCAGGAAATTGTTGATTTGCAGCAAAAACTCAATGACAAAGCTGCAGTTATTAGCAAACTCAAAGAATCT CTGGACATGGTCATGAATATGACTGACAAAGAGTATAAGCTGCATCAGGAATGTGGAAAGGTATGTATATAATGGATTTA AAGATAATCAAAATCAGGAATGTGGAAAAGTTTTAATTTTTTTTAACTACCCTGATGTATTATTTCTTTGAAAAACAACA ATAAAAACCAAAAATTTAATTTTTTCTTCAATATTTTTAACATGGAGTCTGTATTTGCTAAAAAATGCCTTAGGATGCAT GCAAAAATAGTGAACTGCAAAGGATTTTTTCTTGTACGGTGTAGCTGATTTTTCATGTATTCAAACTAGGAATCCCAACA ATAGATCCTCCCAGATTCTGTCATTAACACCTCTGCTTGCCCTTTCTCTTCTCCTCTTAACCTTTGTTTGAGAGATTTTA GAGAGGAGGAAGTTTATGTCCTTCCCTTATTTGGCAGTTCCAAATTTCGGGAACTAAAATATAATTCAGAGATAGTTTTG GAGGACTTTTTGAAATTCAACCTTTAAAACATATGACTCAAAAGCTGGAGTTGGATATTCTGCAGCTGAGAGGATTATTA GATGAGTTGAAGCATGTGGAAGATGATGAAGATGCAAAAATTCTGAAGAAGATAGATGCTTTACAGAAGGGTTTAAGTGA AAAGGAAGAGTCACTTGAAGACTTAGATGCATTGAACCACTGCCTAATCTCTGTAGAGCGCAAGAATTTTGATGAGCTTC AAGAAGCCCGAAATGAATTGATTAATGATGTAAGTCTATACTGGTACATTACTCTCTGAAAATTTCATTCAATTTTTAAA GATTGCTTGAATGATATTGGAATAATGTTTTTCTCTCATGTAGGACATTATGGAGAAGAAGTCAAAATATGTTCGTATTG GAGTTAAGAGAATGGGGGAGATTGACACTAGACCCTTCCTTGAAGCAATGAAGGAAAGATATAATGAGGAAGAAGCTGCA GTGAGAGCTTCAGAACTGAGTTCAATGTGGGCAGATTATCTGAAGGACACCAATTGGCATCCATTCAAAGTTGTCACAAT TGAAGGGAAAGAAAAGGTATGTCTTTGTTAATAAGTCCAACATAGATTCGTTTTAATCTACAATTTCATTTTCTTAATTT CAGGAGATTATTGATGATGACGATGAAAAGCTGAATGGTCTCAAAAATGACATTGGTGAAGGGGCATACAATGCTGTTGT GACTGCTTTAGTAGAGTTCAATGAATATAATCCTAGTGGGCGATACGTAACCAAAGAATTATGGAACTATAGAGAGGGAA GGAGAGCAACTCTGAAAGAAGCAATTCAGGATCTTATCAGGAAAAGGAAAATGAGCCAGAGACACTAGAGGTGGGTAATG TGATGCTTTTGTTGTGTATACAACTATATAATGGATTTATGTTACTGCATTTTTCATACAAATTGTGTAGCTAGAACTTG GAAACAAAAAGATTAAAGCTGATTGGTATATGTAGCTTTAGTTACCTATAACTAAAGTTGCCCAACTTTATTTCTCTTGA TGGTTTGTTTTCTCAAGAAACTAGTTGATTTATAGCATTCTGAATCCCCTTGTGCTTTTTCAATATTGCTACTGTTATCA TTCTAATTACTGTGTCATGTAATATTGAATTTTATTGCTGAAAGGTTGTTTGATGTTGGAATTACAGGGTTGAACATGCT GTGTTCGTAGATAGAATGAAGCTTCGGAGCTGGGTAGCACTCATCAAATTAGTCGAACTGCGAACTTAATGGTTGTGTGT AGTTTTTAAGTAACTTATAATAATGTTGAACTGGTTGGTTTCCCTACTAGACTCTATGAGCTTTTTGCTGAGAATTAAAC TGCATTAGCATTTTGACAGAACCTTTGCGCTATCTCAATCGTGGAAGAAGGCATTTTATGTTAAACTTGGACAGCTTTAT TTTGCCTTCATTTTAGCATGTTTTTTTGTGTTGGCATTTTGGTATATGATTATATTTTACTGTCACTTGGTGATCATGAC CCAACGAA
CDS sequence (LotjaGi6g1v0061300.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGGAAATGGACACTGGACCATTCCTCGAAGCCATGAAGAAAAGATATAATGAAGAGGAAGCTGAAGAGAGAGCTTC AGAACTATGTTCATTGTGGGCAGAATATCTGAAGGACCCAGATTGGCATCCATTCAAAGTTGTCATAATTGAAGGGAAAG AAAAGGAGATTATTGATGATGACGATGAAAAGCTGAATGGTCTCAAAAATGACATTGGTGAAGGGGCATACAATGCTGTT GTGACTGCTTTAGTAGAGTTCAATGAATATAATCCTAGTGGGCGATACGTAACCAAAGAATTATGGAACTATAGAGAGGG AAGGAGAGCAACTCTGAAAGAAGCAATTCAGGATCTTATCAGGAAAAGGAAAATGAGCCAGAGACACTAG
Protein sequence (LotjaGi6g1v0061300.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEMDTGPFLEAMKKRYNEEEAEERASELCSLWAEYLKDPDWHPFKVVIIEGKEKEIIDDDDEKLNGLKNDIGEGAYNAV VTALVEFNEYNPSGRYVTKELWNYREGRRATLKEAIQDLIRKRKMSQRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 125 | 125 | 1.2E-68 | – | |
| PANTHER | 1 | 125 | 125 | 1.2E-68 | – | |
| Pfam | 1 | 128 | 128 | 2.1E-53 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0061300.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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