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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0069400 |
| Transcript ID | LotjaGi6g1v0069400.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphate translocator-related family protein; TAIR: AT3G11320.1 Nucleotide-sugar transporter family protein; Swiss-Prot: sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320; TrEMBL-Plants: tr|V7CZE2|V7CZE2_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0069400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13300899..13303796) extracted from Lotus japonicus Gifu genome v1.2.
ATGAAGGGTTCGAGCCGTTTCTTCACGATTGGGCTTGTTGCAGCGTGGTACTCTTCCAACATTGGAGTGCTTCTGTTGAA TAAGTACTTGCTCAGCAACTATGGTTTCAAGTACCCGATCTTTCTCACCATGTGTCACATGACTGCGTGCTCGTTGCTCA GCTATATTGCCATCGCGTGGATGAAGGTTGTGCCTATGCAGACCATTCGATCCAGGGTTCAATTCTTCAAGATCTCTGCG CTTAGTCTCATTTTCTGTGTCTCTGTGGTGTTTGGGAACATCTCGCTTCGGTATTTGCCTGTGTCTTTCAACCAGGCTAT TGGTGCTACCACGCCTTTCTTCACTGCGGTTTTTGCTTACATCATGACATTCAAGAGGGAGGCTTGGCTCACTTACCTGA CCCTTGTTCCTGTTGTTACTGGGGTTGTCATTGCAAGTGGGGTATGTAATTTGAGACCCTTGTTGTTTTCTTCCTTTGTT GTTTTCCATTGTGTAATCGTGGTTCAAGTTTTAATTGGTGATGATGATGCTGCTGTTTTGGTTATGTTCTTGTTGTTAAT GGGTATGGCTAGATGTAGGAAATAATTTTGGATTTTGACTTTCTAATGCTTTAATCATCGAATTTATCTAGTTTAGGATT GTTTCAGATGTGATTTCAGATGCCTAGCAAGAAATTAAGCACTGTTGAATTGGAATTTTAGAAATTTGTGTTGTTCTTCT TGTGTGTCATTCCTTGTGTTCAGTAAACTTAGGACCCGTTTGGATACCCTTTAGAAAGTATGTAAATGAGAAACTAACAT ATCTCAATGCACTTTTTGGTGAAGTAGTAAGTTGTTACTTCATCAAAAAAGTGTCTCATGATGCGTTATTTTCATGTTTT CCGACTTTCTAATAGGTATGCAAACAGGCTTTTATGTGAGGTTAGCAGATTGGCAAGCATTTGTTTTTAATGAGGAATTT AAGATGAATGGAATTCATTTTTTGGTGAGAGATAGTTCATGCTTCCCGATTTTACGTGTTATCCAGTTTTTAAGTAGTAA TTGATACATTTGTCTGATGTATTCTTGGAGTGCTATTAATTTGTTAAAAGTAAAAATTATCTGGCTTCTGATATGTTTTT CTTCTTTCTCTACTTGGTCATAGGGTGAACCAAGTTTCCATTTATTTGGATTCATAATATGTATTGCGGCTACAGCGGCA AGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGGTAAGGATTGAGGAAGTCAAGATTAGATCAGTA ATCATTAATTTATCGCTGATTTTTTTGTCTTTTTTCAAGGTATATATTCAAATAGGGCTGACATCCTTCTTCTTGTTTAC CAGAGAGAAGCTGAATTCTATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTTCTTCTTCCTGCCACACTTA TAATGGAAGAAAATGTTGTTGGCATCACCTTGGCGCTCGCCAGAGATGATGTCAAGATCATTTGGTATCTTCTATTTAAT TCGACACTTGCGTATTTTGTCAACCTGACCAATTTTCTGGTCACGAAACATACCAGTGCTTTGACCCTTCAGGTAAGTTC CCATTTATTCAAATTGGCGTTTATCTCATCAGTTGGTAGTTGGAACATTAGATTCAGATTTTGGGTGTTTGTCAAATTGA GTTTATAATCAAATTGCAAGATGTGTCACAGTCAAGCATGGTCCTGATCACCTTTATTTTTATTTGTTCTTTAGCAATAT GCATTGGTACAGCAGTTTGTCTGTGGTTGTGGAGTATCTTGTTCCCTGGTTATTTTTTTCTTTTTTATTTGAGAATGAAA TTCTTTGAGAACAAATTACCTGAGGTCATTTGAGTTTTTATGCCTTGTGTGTAGTCTACTTTCTCAAAACTCATAGATAT GTAGGTTTTCCTGTTCTATTTTCTGTTACAATCAGTGATTTCATAAGTAGTTCTAGCAAAATTAATTTATGAAATGCCAC TAAAATTTTCTGCTAGATTTAGAAGCACAATAAACTCCTCTAAATTGAGTTTATCTTCAAAGTGAGAAAGTGAGGGCATA TTCAATTTGGATTTTATGAGTTATGATTACAGTGCACTTTAAATTAAATCAGTGGTAATAGACTCCCACTTTCCCACTTT ACAGACAAACCTACTTTATATGAGCTTTTTCCCTCTACAGCTCATGTTAGGCCAGTATCTTCAAACATTTCTATTGAAAA TTCATTAGCACCTAAAACTAAAATTAAATTTTGTTGATTGCAGTTTTCGTAATCAATTATTCTAAATGATTTATTAACCA TGCTCAAGACTAATGTGGTGGTCAATTTATTTTCACTTGATATGCTGACTGTTACTGTGTTACACCTGGCTTGACCTAAT TTGCTGAAGTCGCATGTAGCTATGATTTTTTTATTTGATACCCTATGCTATATAAATCCTTGATCTGGCAAACCACAAGG ATTGCATGAGGTTATAGATTCAAATCCTATTGTCACTACTGTACACACAAAGAAGTCCTTGATCAAGTTTGTAAGGAATT GGTGTGTTTGACGTTTAGGAAGGATCTTCGTATGGCAGTCGAATGCTTTTGCATTAATGAAATGAGTGTCATTCTAATGA GGATATAAATGGATGAATTGACATCTTTTTGTTTGTTTAAATTTATGGTGATTTAAATTGATGCTTTAACTAATGTAAGA GTTGGCTCATACAGGTACTAGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTAATATTTAAAAACCCAGTG TCAGTCACTGGAATGATGGGTTATGCGCTCACAGTCTTTGGAGTAATACTTTACAGTGAAGCCAAAAAGCGAAGCAAGTG AGGCTCAGATCACAGTGA
CDS sequence (LotjaGi6g1v0069400.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGGGTTCGAGCCGTTTCTTCACGATTGGGCTTGTTGCAGCGTGGTACTCTTCCAACATTGGAGTGCTTCTGTTGAA TAAGTACTTGCTCAGCAACTATGGTTTCAAGTACCCGATCTTTCTCACCATGTGTCACATGACTGCGTGCTCGTTGCTCA GCTATATTGCCATCGCGTGGATGAAGGTTGTGCCTATGCAGACCATTCGATCCAGGGTTCAATTCTTCAAGATCTCTGCG CTTAGTCTCATTTTCTGTGTCTCTGTGGTGTTTGGGAACATCTCGCTTCGGTATTTGCCTGTGTCTTTCAACCAGGCTAT TGGTGCTACCACGCCTTTCTTCACTGCGGTTTTTGCTTACATCATGACATTCAAGAGGGAGGCTTGGCTCACTTACCTGA CCCTTGTTCCTGTTGTTACTGGGGTTGTCATTGCAAGTGGGGGTGAACCAAGTTTCCATTTATTTGGATTCATAATATGT ATTGCGGCTACAGCGGCAAGGGCCCTAAAATCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTC TATGAACCTTCTCCTTTACATGGCTCCAATGGCTGTGGTTTTTCTTCTTCCTGCCACACTTATAATGGAAGAAAATGTTG TTGGCATCACCTTGGCGCTCGCCAGAGATGATGTCAAGATCATTTGGTATCTTCTATTTAATTCGACACTTGCGTATTTT GTCAACCTGACCAATTTTCTGGTCACGAAACATACCAGTGCTTTGACCCTTCAGCAATATGCATTGGTACAAGTTGGCTC ATACAGGTACTAG
Protein sequence (LotjaGi6g1v0069400.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKGSSRFFTIGLVAAWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYIAIAWMKVVPMQTIRSRVQFFKISA LSLIFCVSVVFGNISLRYLPVSFNQAIGATTPFFTAVFAYIMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFIIC IAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSTLAYF VNLTNFLVTKHTSALTLQQYALVQVGSYRY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 6 | 6 | - | – | |
| PANTHER | 5 | 259 | 255 | 6.5E-157 | – | |
| PANTHER | 5 | 259 | 255 | 6.5E-157 | – | |
| TMHMM | 7 | 26 | 20 | - | – | |
| Phobius | 7 | 26 | 20 | - | – | |
| Pfam | 12 | 256 | 245 | 1.3E-35 | ||
| Phobius | 27 | 37 | 11 | - | – | |
| Phobius | 38 | 63 | 26 | - | – | |
| TMHMM | 39 | 61 | 23 | - | – | |
| Phobius | 64 | 74 | 11 | - | – | |
| TMHMM | 73 | 95 | 23 | - | – | |
| Phobius | 75 | 96 | 22 | - | – | |
| Phobius | 97 | 101 | 5 | - | – | |
| TMHMM | 99 | 121 | 23 | - | – | |
| Phobius | 102 | 122 | 21 | - | – | |
| Phobius | 123 | 128 | 6 | - | – | |
| TMHMM | 128 | 147 | 20 | - | – | |
| Phobius | 129 | 146 | 18 | - | – | |
| Phobius | 147 | 151 | 5 | - | – | |
| Phobius | 152 | 169 | 18 | - | – | |
| TMHMM | 152 | 169 | 18 | - | – | |
| Phobius | 170 | 189 | 20 | - | – | |
| Phobius | 190 | 207 | 18 | - | – | |
| TMHMM | 190 | 207 | 18 | - | – | |
| Phobius | 208 | 226 | 19 | - | – | |
| TMHMM | 227 | 249 | 23 | - | – | |
| Phobius | 227 | 248 | 22 | - | – | |
| Phobius | 249 | 270 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0069400.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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