Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0096700 |
| Transcript ID | LotjaGi6g1v0096700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Oxysterol-binding family protein; TAIR: AT1G13170.2 OSBP(oxysterol binding protein)-related protein 1D; Swiss-Prot: sp|Q9SAF0|ORP1D_ARATH Oxysterol-binding protein-related protein 1D; TrEMBL-Plants: tr|A0A151U962|A0A151U962_CAJCA Oxysterol-binding protein isogeny C2F12.05c; Found in the gene: LotjaGi6g1v0096700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:20971099..20978366) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATCCACTGTGCTGCATTGCTCCGGTTTCGATCGATCGGGACAGGCCGAACCCTGTGGTGACGAAATCGCCTGGTCA GTGTCAGTTAGGGCTAGATTCAACAGTCAGGACGACGGTGAACTGCGCTTTCAGATCGGTCTCCTCCGCTCAGGACTCGT CGCTCGCTGGCGGCGACTCCGTCAAATCATCAACCGCCCACGACGACAACGACGAGGAGCCTCGGGATTCCAAGGTGTTT GCTGGTGGTGGAGGTAGTGTGGCGGGGATACTGTACAAGTGGGTGAACTACGGCAAGGGGTGGAGGTCACGGTGGTTTGT GCTTGAAGATGGTGTGCTTTCGTATTACAAGATTCATGGGCCGGACAAGATCTTGATGAGCCCTGCTAAGGATAGGGGTG TGAGGGTGATCGGTGAGGAGTCGTCGAAGTTCGTGAAGAAGGCGAATTGGAACCTCAATCGGGGAGTCTCTGGAGTTGGA GGAGGAGGATCCACCAAGCAATGCAAGCCCTTTGGTGAGATACATTTGAAGGTTTGTTTCTTGTGATTTCAGATGCTGAT CAAATTTCAATGTTTTTGCTCTGTTAATTTGAAATGCCTCTTTACTCTGTTAATTTTCTGGTTTTTTCGTGTCATGCTAT AGTTTTTTTTTATTAATTTGCTCCAACTTCATTGATTAGAATCGTCATGTATATGCATGTGTGGTGTTTCTTTGTGCTGC TTGGCCTGATTTACCACAATATTTGCAAGAAAAAGGGGGCTATGGGTGGAGGGTTGTGAGGCAAGAGAACTGGGACATTA ATGGCTGACGTGCTAAATATAACTCAAGGTGTTGAATGGATCATCTCTTGCATTTGCTTGCAAACATGTATCCGCATTGA AATATATGTACTCTCCGTGGTTGGGTTATCATTTTTTTTTACCTTGACCGGGCAGTGATATGCAATTGAAATATCGATTA AATCACCATGTCTTGTTTGCCGATATTATTGATTTATGTGTTAGATTGACTATTTTCTAAAGTATATCTGGGTCACTTGT GTGTTTGAAATATTGAGTTATACTTGACTTGGGCGTAAATATTTGCTAGAGCTGTGATCAAGTCCTTATACTTGTATCTT TTTCTTTTGGTTTTCGTATCAAGTTTCCTTGCTAGTCTCTTGTAGTGAGGACTAAATCTGAATGTCTTGCTTACAGGTTT CTTCAGTTCGTTCCAGCAAGTCAGATGACAAGCGACTTTCTATATTTACTGGGACAAAAACCCTTCACTTGCGTTGCGTT TCTAGAGAAGACAGAGCCATGTGGATTGAGGCCTTGCAGTGTGCTAAAGATCTTTTTCCTAGAGCTCTAACTAGTGGCGA TCTTGCAACTTCAGAAGATATTGTAGTTTCGACAGAGAAGCTCCGTTCGCGATTATCACAGGAAGGCATTAATGAAGCAA TCATTAGTGACTGTGAGTCTATTATGCTCTCTGAAGTCTCTTATCTTCAAGGCAAGTTTAAGTTTCTTCAGCAGAAACAT TTTATGTTGCTGGACACCTTAAAACAACTGGAGGTATCGGTCTTTCCTTCTGAAACACTTCCTGGAACATTATCTCGTAA TTAATAAGGTGTATTTTAGTTTGGCCTAGCCTTTTAGGGTTTCAGAATATCAAAATCTACTGAATTATTTTAAGTTAAAT GTTGACATATTAGGCTACATAAAGAATATTGCAGGGTCTGGGTATATATGGTTTGAACCTCCCTAAGTAGTGTAAAGTAA TGTTTCTGTCACGGACATGACAATATGCTATGGATAAGCCGTCCAGCCCACAACTGCATTACTTAAATTTTGCATGCCCC TATGTCAACCCCTTTATTCCTCTCACTATGAGTACAAGGGCACTGAATGGCTCTTACATAGTCTTTTTCCTCTCGTTAAT ACTGACATGCTGATTTGTGGCCGATTTTGAATGGGTAGTGAGTACAACTGTTGGTCTCTTGATTTCTTTTCCTGGAATAT ATTCAATTTACATACCATTTCGCTCCTATGAGCTCTACTGTTGGTCATGCCATGTTGAATGATGAAATGCTTGCTAATAA AGATTTTGGTTTTTTCTCTCACAATTAATGCAGACGGAGAAGATAGAGTTGGAAACTACTGTAGTGGATGAAACAAAGGA ACGTGAGTCATATTGTGGACAAGTGAATAGAAGGTTTAGTGGTGAGTGTGCTGTTAACCATCATCTGTTTTGGGTAGTTT TGTTTAATGTGGTCATATATTTTAAATTTAGTCAGATTTTTCAAACTTAATGCCTCAGATTGAATAACTACCAACATTGT TGACTTCTGGGTAGTTGTAGCTTGTATGAAGCATTAGGAAGTTAATGAATTATCTGTATGCCTTGCCAACTGGTAGTTTT GAAGTTAACTCCTTGACTTGCCCCCCTCATGTCTCAGATTTTTATTCTGTGTTGTCGGAGGGCAGTGCTACTGATTCTGT AGCAGATAATGAAAGTCAAGATGGAGCGGATGCTGAAACAGATGATGATGATGGAGCATATTTTGACACAAACGAGATTT TGTATTCGGATGCCTTGAGAAGTGCTTCCTATCGAAGTCGGGAAGGTATAGGAAATGGCAGCATATATGATAGAGATTAT ATTCTTTATGATGGTTTGCATGGGTTTGAGAAAGAGATCAAAGATATAAGTTATCCTTTTGTTAAAAGAAGGGACAACTT GCCAGAGCCAAAAGAGAAAGAGAAGCCTATGGGCTTGTGGTCAATTATTAAAGACAATATCGGAAAGGATCTTTCTGGAG TTTGTCTCCCTGTTTATTTTAATGAACCGCTCTCTTCATTGCAAAAGTGTTTCGAAGACCTAGAGTATTCAAACCTGGTT GATAGAGCATTGGAGTGGGGAAAGCAGGTCAGGTCCTCAGCTGTGCTTTCTTTTGTCTCAAAGCAGTTTTAAAAGCATGA TCTCCTAGGTTCATTTTGTCAAGGTAGATAATATGTTTGGTCAACTTTAAGGAAATAGCTGCTTATAAAGATTTGAAAAT TTCATATAGTTTCATAATTTTCATTTGATCTACATGTTTGGTTAATTTTAAGGAAGTAGCTGCTTGTTAAGATTTAATCA TTTCATATAGCTTCATAATTCTCATTTGATCTTGCGTGTTTTAATTAACAATTCCTCCACTATTTTTTCCAATTTTTTGT CTGCACTTCTGTTTCTAAATTCAGTCCTTAAAAAAAAAAATAGAGATTGCTTTTTAATACCATTTTGAGATTAGCCAGTT ATATAGACGCTATCCAAGAATAAACATCACGTTTACTATTCTACAATTTTTGTCAGTCTTCTCCACAGTTAGACTTGGAC CACCGACTAAAATACACTTTTTTGCCTTGCATTTTGTTATTGTTTTGACTGTTCTTCTTTAGTTATGAATTTGAGTTTTT CTAAGATAGATATGTCCGTGAAATGTTATTCAGAATTGTTCACAGATACATGACAGCCGAATTCATGGTAGGATTAGTGG GTAGATTAGAATTTTCTTGGGTTGTTGATAGGTAAAAGCAGGAGTTGTTTTAAAGGCTAGCTAGGCTATGAGTCTATGAC CAACTATAAAGCACCAACACAGACACCGAGCACGACATGACACTGCTAATATTTAAAAAGTAGGACTTTGGGACACTGCT TATATAAAAGAAGGGCAAAGCTGGTGCTATAAAGCTCGCGCTCTGCGGGAGGTACAAATAGGGGCCGGATCCACTTTGTG GATCTAATGCAGGCAACCTTACCTCAATCTTTGCAAGAGGCTGATTCCACGGCTGGAACCTGTGACCGCAAAGTCACATG GTAGCAACCTTACTGTTGCGCCAAGGCTCGCCCTCTATACATTAAAAAATAAAAAATCATCAATCTGATATATAAACCAC TTTCTCAAAGTCACAAATTAGTCTCTTTACAAAGAAAACATAAAATAGCTTCCATATGCTAATGAGCTTCACAAAAAAAT ACTAGGAGGCGCCATTTTACATAGTAAGCACCTTGTCTCAAAGAAAGAGCTCTATCTAATGAATATATTGATTGACTTCC AAAAAATTTGCGATAGCAATATCCCCAAATTTCCAGCCAATAAGAGGTGTCAACTTACTCTCTTTAGAAGTGTCCAACTC GAGTCTGAGCCATGTCCATGTTCGAGATGAATTTTTTTTATTCAGACACTGCAAAAAGGTGTCCGACGGGGTGTTTGTGT TTTTCTGGTCTTCGACACTAGACACTCCTTTGAACAGAGGCATCCTTGCAAAAAGGCATCCTTTATGAACAAATTTAAGC TCAACTAATGACATAACAATGTGTTTCGGATATTACAACTTGGCAGTTAGCTCAATTAATGACATAACAGTGTGTTTTGA ATATTACAACTAGGTATAGCCATAAAAATAAACCATCATCCTTGGACAATATGATCTTTAACCTTTGGAAGTTATTCTAC TTTAATCTTATAGTTATCTAAACATGTGGATTAAGAGCTTGTACTAAGCAAAATATAGTTTTGTAACTTGTTTCATGCTG TTGGATAAGTAGCTTCCCATGAGATTGCATTGATAAGAAAAAGAGGCATAACTAAAATCCATAACTGATATATTGTTTAG GATTTGGGTGTCTAGACGCATTCACACTGTTTTATACTAATATCAGAGGCCTGAGTAGATAGGGTTCCAAATAAAGTATG CTTTGCAAGGCCATCTTACAATTTAATATGATGTGAGATGCTGTATCATCCAAGTTTACTATGATAGAAGAAAGTTGAAA AAGGAAAAGATTCAGTTTTTGAGTGCATGCTTTGTATGTTTTTTTTGCTTACTGGATTAGAATTGTTTGAAATCTATGAT ACCAGTCAGGGTTTTGCATGGTGCAGGGGAATGATTTGATGCGAATACTAAATGTTGCAGCTTTTGCTGTGTCTAGCTAT GCGTCAACTGAAGGCAGGCAGTGTAAACCTTTCAATCCTTTACTTGGGGAGACTTATGAAGCCGACTATCCAGATAAAGG ACTTAGGTTTTTTTCTGAGAAGGTGGCTGGATTTTTCCTTTAAATTTTCTGTCAATTAAGGTCTATGAAATGAATCAAAA CTTACTTGTGAACATAGAACGATAAGAAAACTCATAAATTCAATTTTCTTCACAGCCTTTCACATTGAATCTGAAAATGG GTAGGGATCTGTCTCTATCTGTTATGCCATTAATATGCATCTAACAAGAATAACTGACTGAGCCTTGCTCATTGAATCTG AAAATGGTAGTGATTTGTGTCTAGTTTATGCTGATAATTTTCATCTAACTAGAAACTTGCTGCAGGTCAGTCATCATCCA ATGATAGTTGCTTGTCACTGTGAGGGAGGTGGATGGAAGTTCTGGGCAGACTCTAATTTGAAAGGAAAATTCTGGGGCCG TTCTATTCAGTTAGACCCTGTAGGTGTCCTCACCCTACAGTTCGAGGATGGTGAAACATTTCAGTGGAGCAAGGTCACCA CTTCCATATACAATATCATACTAGGTAAAATATATTGTGACCACTATGGTACCATGCACATCAAAGGCAGTGGCAACTAC TCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGACCGGAATCCACATCAGGTAGGATTTTAAATGCAACTAGGACA TAGACACTGCATGCATAAATGAACTTTGTTTTGGTCATTTTTTCCTTCCCCAACTTCATCTTTTGACTGAATTCACTATT GATATTATATTTTTAATTAAGTGGCAAATCATGCAGTACCTTGTCAGTTCAGTTGACCATTCACTAATAATTAAAAAAAT CTTACATTTTTTCTTTTTTACATTATTTTCAATTGTACAAAATTTGTGCAGAAGTTATTGAAAAACAAAGTTTATTTACT GTACAAATGTTTGAAAAAAGTTCAACACAAATATCATTTTTGAGTATTTTTTTCAGTAAGTAAAAGTTAGTTTTTAACTA GTAAAACTTAGGTGTAAATAAAGTAACTTCATACATACTTTTGGGTTAGTAAAAAGTGAGTTAGATTTTATTTTTCAAAT TATCCATATTGATGTACCATGTTTTTATTATTATATCTATCATCTTATGTCTATTTTAATAATATATCTCTAAAATTAAT TTCACTTTTTTTTATCTAAAAAGCATTCATTTTTTCAAACTTCATTATATCAAACTTACTTTTGTTGAACTTAGTTGATG TGCTTTCCGATTCAGTTAGCAGTAGCACAATGTCCTTGGTTATAATTTATATTCCTTTTTTTTGCATTTGTTTAAATTAC ATTTTGCCTCTTCTCATTTGCTAGGAACTTGGCTACTCACATGAGTAGCTTGGATTCTCTGCTTTTCTTTTTTTAATAGA ACTGAATGGACTTTTAATCATATATATCAGGTCCATGGGTTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTT GATTGGGAAGTGGGATGAAGCGATGTATTATGTACTTGGGGATCCAACTACAAAGCCAAAAGGTTATGATCCAATGACAG AAGCTGCATTATTGTGGGAAAGGGACAACTATGTTTCCAAAACAAGATATAACCTCTCTCCTTTTGCGATTTCGCTGAAT GAAATAACGCCTGGTTTATCAGAGAAGTTGCCTCCAACTGACTCAAGGTTGAGACCAGACCAAAGACATTTAGAAAATGG AGAGTATGAATTGGCAAATGCAGAGAAACTGAGACTTGAACAGCTGCAGAGACAGGTAATTGAAATTCATACTCAAGACA CAACTTATGATCCTTCGTATCTACTGTGTTGGTGTATAAGTTTTCTTCTGTTTCTTTTCCAGGCGTGACTAGCTGAATTG TTATTCTTTTTACCCCTTCGTGATAATGGCAGTGTCCAAATATTTCCAACACCTTGCAGCATTTTTTTTTCTCAGCATTA TATGTTGCCATTTGTTTGCAAAATCCGCTGTTCTTATTATTGAATCTCTTAAGATTCATGCTATTTTGTGCATGTTCAGT TATTCTCTTATTGAAACTGCAACTCATGCTTGATTCATGATTCAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAG ATGGTTTAAAAAGGACGAGGATGGTTGTTACCGATATATGGGTGGCTATTGGGAAGAAAGAGAAAAGAATAATTGGGATG GAATCCCTGATATCTTTGGACAGAGTTGTGATTTGCCTTCGTGTTCTGAAGAGACTGTATTTTATTGA
CDS sequence (LotjaGi6g1v0096700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGCAGGGGAATGATTTGATGCGAATACTAAATGTTGCAGCTTTTGCTGTGTCTAGCTATGCGTCAACTGAAGGCAG GCAGTGTAAACCTTTCAATCCTTTACTTGGGGAGACTTATGAAGCCGACTATCCAGATAAAGGACTTAGGTTTTTTTCTG AGAAGGTCAGTCATCATCCAATGATAGTTGCTTGTCACTGTGAGGGAGGTGGATGGAAGTTCTGGGCAGACTCTAATTTG AAAGGAAAATTCTGGGGCCGTTCTATTCAGTTAGACCCTGTAGGTGTCCTCACCCTACAGTTCGAGGATGGTGAAACATT TCAGTGGAGCAAGGTCACCACTTCCATATACAATATCATACTAGGTAAAATATATTGTGACCACTATGGTACCATGCACA TCAAAGGCAGTGGCAACTACTCTTGCAAACTGAAGTTCAAAGAGCAATCTATCATAGACCGGAATCCACATCAGGTCCAT GGGTTTGTTCAAGACAACAGAACCGGAGAGAAGGTAGCAATGTTGATTGGGAAGTGGGATGAAGCGATGTATTATGTACT TGGGGATCCAACTACAAAGCCAAAAGGTTATGATCCAATGACAGAAGCTGCATTATTGTGGGAAAGGGACAACTATGTTT CCAAAACAAGATATAACCTCTCTCCTTTTGCGATTTCGCTGAATGAAATAACGCCTGGTTTATCAGAGAAGTTGCCTCCA ACTGACTCAAGGTTGAGACCAGACCAAAGACATTTAGAAAATGGAGAGTATGAATTGGCAAATGCAGAGAAACTGAGACT TGAACAGCTGCAGAGACAGGCAAGAAAGATGCAAGAAAGAGGATGGCAGCCCAGATGGTTTAAAAAGGACGAGGATGGTT GTTACCGATATATGGGTGGCTATTGGGAAGAAAGAGAAAAGAATAATTGGGATGGAATCCCTGATATCTTTGGACAGAGT TGTGATTTGCCTTCGTGTTCTGAAGAGACTGTATTTTATTGA
Protein sequence (LotjaGi6g1v0096700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVQGNDLMRILNVAAFAVSSYASTEGRQCKPFNPLLGETYEADYPDKGLRFFSEKVSHHPMIVACHCEGGGWKFWADSNL KGKFWGRSIQLDPVGVLTLQFEDGETFQWSKVTTSIYNIILGKIYCDHYGTMHIKGSGNYSCKLKFKEQSIIDRNPHQVH GFVQDNRTGEKVAMLIGKWDEAMYYVLGDPTTKPKGYDPMTEAALLWERDNYVSKTRYNLSPFAISLNEITPGLSEKLPP TDSRLRPDQRHLENGEYELANAEKLRLEQLQRQARKMQERGWQPRWFKKDEDGCYRYMGGYWEEREKNNWDGIPDIFGQS CDLPSCSEETVFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 9 | 9 | - | – | |
| Phobius | 1 | 22 | 22 | - | – | |
| PANTHER | 3 | 323 | 321 | 8.1E-235 | ||
| PANTHER | 3 | 323 | 321 | 8.1E-235 | – | |
| SUPERFAMILY | 4 | 319 | 316 | 1.28E-96 | ||
| Pfam | 5 | 303 | 299 | 1.4E-99 | ||
| Phobius | 10 | 18 | 9 | - | – | |
| Phobius | 19 | 22 | 4 | - | – | |
| Phobius | 23 | 333 | 311 | - | – | |
| Gene3D | 37 | 203 | 167 | 5.8E-25 | – | |
| Coils | 260 | 280 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0096700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…