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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0166000 |
| Transcript ID | LotjaGi6g1v0166000.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pollen Ole e 1 allergen and extensin family protein; TAIR: AT5G54855.1 Pollen Ole e 1 allergen and extensin family protein; Swiss-Prot: sp|P19963|ALL1_OLEEU Major pollen allergen Ole e 1; TrEMBL-Plants: tr|I3SS61|I3SS61_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0166000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45002563..45004720) extracted from Lotus japonicus Gifu genome v1.2.
ATGGAAGCCATGAATCAGAAGATGGTGATGAGTTTGATTCTGTTGTTGTTCTCTGCTTTGGGTGTGAGTGCTTGGACTGG TGAAATCCATGGAAGAGTTGTTTGTGATGTTTGTGGGGATTCTTCTCTTGGACCTGAAGACCATGTTCTTGAAGGTCTCT CTCTAATTGGTGTTATATTGCAATTCTATGTTGTTTTGATTGAGTTTTTGAAGTGGGGTTTTTTCCCTTTTGATGAAATT TGTTTGCTTTTTGTGTTGATAGGCTTATCATTCTCCACCAATTATTGAATTTGGCTGTGTACTTGTGTGTTTTGGTATTG GTGGTGTAATTAGTGATGAATATTTTTAAGATTTAAGCATTTCATGTGCCAATTTCTTGCTTGATTTTATGTTGTATGAT CAGTGGAGGAAGCTTGCATTAGAACAATTGACTGTGGACTGGATTGTTAATTTGTTATAGTCATAAGTCTGTTGCTGTCA CACATGTGATTGAATATGGAACATGTTTTCAGAATTTATTTATCTAATGAGAGATGCTACCATAAACCCTTAGGAAGTTA TGATCATGGTGATGACCTATGCCAAATTATTTGTTTTTTCCCTTCACACTGATCAAAACAAAGTAAGTAGTGAAGGGTGG TCACTAGTGAAGGATGGTCACTGGAGAAGGGTGCTGGTCCTTGGAGCTCAAAGGTGAGAGGGCAAAGTGAGTAGTGAGAA GAGGGCTGAGACGGTCCGATTTGCAATTCTTAACGAAGAATGAAGCTTCATTCTCGCAAGTTTGACCTAAATTGGCCCTG GAAAGTCCTAAAATGCCCCTAAAAAGGTTCCTCAACTGTTTAAAACCTAGGGGCTTGAGTCATTTTGTCCTTCGTCCATA TATTGGCCGTGATCTGTCGCTATTTTGGCCGCTATTCATGTCGCTACGGGAGCTATTGTTAGGTGCCGCTATTTCATCTC AATAGCGGCAGGGAGCCACTCTGCTCCGCTATGCCGCTATAGCGCGCTGTTGACTACTATGTTATGTATATAATATTTAG TAATGGTATCGTAGGTTCAAAGATATATATTCCATAATAGTCACATCCCTTTATTAGATTGCATCCGATTGTCTTGTAAT AGTTAATAATTTCCAAACTAATTTCATGACATCCTTTTACCATCCTACTGCTATGATTAATTATATTTTACTCCCTACAC ATTTGGTTTCCTTTTTGCATGCATAAGGATAAGTGTATTTCACATAAGCAGATTCTGGTTAAGAGGTATATAAAGGATGG AGTGTCCCAATTCTTAGTGTTCTTGCAAAGTGAGTTCACGAGAGAATTTAGTGCCATTAAGGATGACTAAACGTATAGGA ACTACCTGTTTACGGGACAGTATGTTGTAAAAAAAAGTGTCTGATTGAGTTGTCTTTTCAGGAGATAGGTTTCTCATGAA TGTATTCTTACATAAGCTATTAAGCTTTGATACTTATCAGGATAACATTTTCTTCTATTCTCTGTTTTCTTCTCTGTTCC CCTGTCATTCAAAGTAATTTCCTCCTATTTTCATAAACTGCAGGAACCTAGGTTGTTGAAAAGTAGACCTCTCAAAATGC TGGTTTTTTTTCATTTTCACAATTGGTGAAAAACTAGACAAACAGCTTCATGTTTTAAAGCAATCAACTTTCAAATTTTA TCCTAAAGATCCATGTGATGTTTCATGGCTGTTCTTTCCATTTTTCTTTAAGCAATATGTAATATTGATTCTGTCACAAC AGAATTTAATGTGGCCTCTATCAGAAATGATACTTCATTCTTGGTTCAGAGCTAGGATGCAGTTTCCCTAGATTGACTTT AACATGATAGTAACATATTGGAAGATTAATGCAGGTGCTGAGGTTGCTGTTCTTTGCATCACCAAGTCCGGGGAGGTTCT AAATTATCAGGCATTTACTGATGCTAAAGGGATATACACAGTGGCAGAGACAATGCCTGAGAGTGACCGTTGGGATGCAT GTCTTGCTCGACCCATCAGCAGTTTCCATGAGCACTGCACTCATCTTGGTCAGGGCAGCCCAGGGGTGAAATTCAGTTAC AATCACCCATCAGGACGTTCACATTCTGTCAGAACCTTTATTTATCGACCTGTCAGTGTTCCAACATACTGCATTTGA
CDS sequence (LotjaGi6g1v0166000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGCCATGAATCAGAAGATGGTGATGAGTTTGATTCTGTTGTTGTTCTCTGCTTTGGGTGTGAGTGCTTGGACTGG TGAAATCCATGGAAGAGTTGTTTGTGATGTTTGTGGGGATTCTTCTCTTGGACCTGAAGACCATGTTCTTGAAGGTGCTG AGGTTGCTGTTCTTTGCATCACCAAGTCCGGGGAGGTTCTAAATTATCAGGCATTTACTGATGCTAAAGGGATATACACA GTGGCAGAGACAATGCCTGAGAGTGACCGTTGGGATGCATGTCTTGCTCGACCCATCAGCAGTTTCCATGAGCACTGCAC TCATCTTGGTCAGGGCAGCCCAGGGGTGAAATTCAGTTACAATCACCCATCAGGACGTTCACATTCTGTCAGAACCTTTA TTTATCGACCTGTCAGTGTTCCAACATACTGCATTTGA
Protein sequence (LotjaGi6g1v0166000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAMNQKMVMSLILLLFSALGVSAWTGEIHGRVVCDVCGDSSLGPEDHVLEGAEVAVLCITKSGEVLNYQAFTDAKGIYT VAETMPESDRWDACLARPISSFHEHCTHLGQGSPGVKFSYNHPSGRSHSVRTFIYRPVSVPTYCI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| PANTHER | 1 | 145 | 145 | 7.6E-82 | – | |
| PANTHER | 1 | 145 | 145 | 7.6E-82 | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 9 | 20 | 12 | - | – | |
| Phobius | 21 | 24 | 4 | - | – | |
| Phobius | 25 | 145 | 121 | - | – | |
| Pfam | 29 | 112 | 84 | 1.3E-8 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0166000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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