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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0168400 |
| Transcript ID | LotjaGi6g1v0168400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glycerol-3-phosphate acyltransferase; TAIR: AT1G06520.1 glycerol-3-phosphate acyltransferase 1; Swiss-Prot: sp|Q9SHJ5|GPAT1_ARATH Glycerol-3-phosphate acyltransferase 1; TrEMBL-Plants: tr|A0A1J7HP82|A0A1J7HP82_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0168400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:45396141..45397800) extracted from Lotus japonicus Gifu genome v1.2.
ATAATGACAGGAAGCTTATGTGGTGAACAATGAAGAGTGTGATCCAGGCTCAGTTATGCTATTGCCAAGGGAAAAATACC CAAAGCCTGTGATATTTCATGATGGAAGGCTAGCATTCTTTCCTACTCCTTCAGCAACACTTTGCATGTTCATTTGGCTC CCAATTGGAGTTCTTTTAGCCATTTACAGAATGCTTCTGGGAATTTTCCTATGTCACAAATGGACATTAGCATTAGTAAT ATGGAGTGGCATAGATCTGAATGTCAAAGACTGTAGCAACCCTCAAAGATCAGAGAAAGGGGTCCTCTATGTTTGCACAC ACAGGACCCTCTTGGATCCTGTTTTTCTTAGCTTGTGTTTGGGGAAGCCTCTAACTGCTGTCACATACAGCTTAAGTAAA GTTTCAGAGTTCATATCACCAATTAGGACAATGAGATTGACAAGGGACAGAGAAAAAGATAGGGAAACCATGCAGAAGCT GCTTAGTGAAGGGGATTTGGTGGTGTGCCCTGAAGGAACAACTTGCAGGGAGCCATATTTGTTAAGGTTCAGTTCTCTTT TTGCAGAATTGGCTGATGTGGTTGTCCCTGTTGCTGTTAATGTTCATGTGAGCATGTTCTATGGGACCACAGCTAGTGGG TTGAAGTGCTTGGACCCACTTTTCTTTTTCATGAATCCAAGGCCTAGTTATCACATTGAGATACTTGGAAAGGTTCCTGA GGAACACACATGTGGTGGTGGAGAGTGTGCTTATGAAGTGGCAAACTATATCCAGAGACAGTTGGGTGATGCTTTGGGAT TTGACTGCACCAACCTTACAAGGAAGGATAAATATATGATGCTGGCTGGGAATGAAGGAGTTGTTCAAGAAAAAGAGAGG TGAAAAATCTTGCAATGAAGTTTCTCATTCATTTGAGTTAGTGTTCAACTTATATTAATCAACTGTAAGTGCCAATTCCA CTGGCATGATGAAACCAAACATGCATATGCTATTAGATATTAAGTTATTGAAAAATAGTAACACACTCTTTTGAAGATAC TAATGCACCTAAAACTCCTATTAATAATTAAGGAAAGCATATATATAAATGTGGAATTAAATGGTTATATCAAATGACTC ATTTCTATCCTTCACCATCTAGCATTTCAACCCATAACTCTTGAGTAATTTGTCACTCAATAATTATCATGAACACATCT GTAAACATTATTAGCATAACAGTGACACCTTCAAGGAACCACAAAGATGACGCCTTTACCTATTGCCTCCCAACACAGCG GCCTAAAGCCTAAGTTTCCAACAACCCAAACCGCACGCAACAACGGAGAAAGGGACGGAGAAAGGGAGACGTCAACCGTC TGACAACGACGAAACAACCTAAGAGGGAAAGTTTTCGACTTTCGCTACCTCCTAACATGCAACTATGCAATACAAGAAGA AAATGAGAAGAACGAAGAACTTACTAATTTGAGAGATTTGAAAATCTTAGTAAGAAATGATTCACACACCACAGATCGTA GCAATTCTAAATTGGGTGAGAAACCAACAATAAGACTAGCAGAGTAGCAGTTGTACGCAAAGCTTGTCTTTGTCTGTTAC CTCTTCATCAGCTATATGCTCAAAACAATTATGTGTTGTGTTCTCTCAACTGATTCAAAC
CDS sequence (LotjaGi6g1v0168400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTATTGCCAAGGGAAAAATACCCAAAGCCTGTGATATTTCATGATGGAAGGCTAGCATTCTTTCCTACTCCTTCAGC AACACTTTGCATGTTCATTTGGCTCCCAATTGGAGTTCTTTTAGCCATTTACAGAATGCTTCTGGGAATTTTCCTATGTC ACAAATGGACATTAGCATTAGTAATATGGAGTGGCATAGATCTGAATGTCAAAGACTGTAGCAACCCTCAAAGATCAGAG AAAGGGGTCCTCTATGTTTGCACACACAGGACCCTCTTGGATCCTGTTTTTCTTAGCTTGTGTTTGGGGAAGCCTCTAAC TGCTGTCACATACAGCTTAAGTAAAGTTTCAGAGTTCATATCACCAATTAGGACAATGAGATTGACAAGGGACAGAGAAA AAGATAGGGAAACCATGCAGAAGCTGCTTAGTGAAGGGGATTTGGTGGTGTGCCCTGAAGGAACAACTTGCAGGGAGCCA TATTTGTTAAGGTTCAGTTCTCTTTTTGCAGAATTGGCTGATGTGGTTGTCCCTGTTGCTGTTAATGTTCATGTGAGCAT GTTCTATGGGACCACAGCTAGTGGGTTGAAGTGCTTGGACCCACTTTTCTTTTTCATGAATCCAAGGCCTAGTTATCACA TTGAGATACTTGGAAAGGTTCCTGAGGAACACACATGTGGTGGTGGAGAGTGTGCTTATGAAGTGGCAAACTATATCCAG AGACAGTTGGGTGATGCTTTGGGATTTGACTGCACCAACCTTACAAGGAAGGATAAATATATGATGCTGGCTGGGAATGA AGGAGTTGTTCAAGAAAAAGAGAGGTGA
Protein sequence (LotjaGi6g1v0168400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLPREKYPKPVIFHDGRLAFFPTPSATLCMFIWLPIGVLLAIYRMLLGIFLCHKWTLALVIWSGIDLNVKDCSNPQRSE KGVLYVCTHRTLLDPVFLSLCLGKPLTAVTYSLSKVSEFISPIRTMRLTRDREKDRETMQKLLSEGDLVVCPEGTTCREP YLLRFSSLFAELADVVVPVAVNVHVSMFYGTTASGLKCLDPLFFFMNPRPSYHIEILGKVPEEHTCGGGECAYEVANYIQ RQLGDALGFDCTNLTRKDKYMMLAGNEGVVQEKER
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 2 | 274 | 273 | 2.5E-161 | – | |
| PANTHER | 2 | 274 | 273 | 2.5E-161 | – | |
| Phobius | 20 | 40 | 21 | - | – | |
| TMHMM | 21 | 43 | 23 | - | – | |
| SUPERFAMILY | 24 | 271 | 248 | 4.45E-30 | – | |
| Phobius | 41 | 46 | 6 | - | – | |
| Phobius | 47 | 66 | 20 | - | – | |
| CDD | 58 | 243 | 186 | 1.44325E-23 | – | |
| Phobius | 67 | 275 | 209 | - | – | |
| Pfam | 78 | 173 | 96 | 4.8E-9 | ||
| SMART | 83 | 184 | 102 | 3.5E-17 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Transferase activity, transferring acyl groups | Catalysis of the transfer of an acyl group from one compound (donor) to another (acceptor). |
Expression pattern of LotjaGi6g1v0168400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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