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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0248600 |
| Transcript ID | LotjaGi6g1v0248600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein-like; TAIR: AT5G48970.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q29RM1|TPC_BOVIN Mitochondrial thiamine pyrophosphate carrier; TrEMBL-Plants: tr|A0A1J7GND2|A0A1J7GND2_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0248600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56075425..56081570) extracted from Lotus japonicus Gifu genome v1.2.
GAGACGATCCAATTTATTAATAATATTTAATAATCACTTAATTAGTTGTCGATTCGTCTGTCTCGGACTCCGCTAAATTC CCTGCGAAACCTCAGACAACAGGAGGAGAATCCTCTGCTCACAAAAACCTTCGCAATCAAATAAGGCGGCAACGCTTTTT GTCCTTCTCTCTCTCTCTACTTTCTCTCTCTAAGTCCCCAATGTCTGTTCCTTTCTCCATTGCCTCCTTCTCCATTCTCA CTTCCTGGTACGTGCTGGTTTCCCTCAGTTTCTGGCAAATTTGAGGTAAACCCTAATTTTTCTTGAGCATTCGTGAAGGG TTCTACTTTTTTTTTTTATCTGTAATTGTGTTTTTTTGTTGTGATATGTGTGAATTGTGTGGTGCAGGTTGTAGTTGGAA AGGGGAGGGTGTTAGTGGTGGCAATGGAGAAGGAGGAGCCCAGCCAGATGAAGCGTGCCATGATTGATTCTTCTGCTGGG GCTATTTCTGGTGGGATATCAAGGACAGTTACCTCTCCTCTTGATGTTATTAAGATTAGGTTCCAGGTATGAATTTTTGT CATAACAATTTCAAATTCATCTTTGTACTTATTAGGAAAATACATCTCACTTTGGAAATTAATTAAGTTGGTCAATTGTA AGCTTTTGCTTGAAATGATTTTCAATATTTAATTTATGAACAACATACTTGATGCAGCAATGTGTCTTTATTTGTGATTT GAGAATGCTGGCCTTGTTATTGAGCTAATTTTACCTGATGTGATGGGGGGTTACTTACAGTTTAAATTTGATAGGTATAT GTCAAAGGACTGTGGCTATCTAGCGTTTGCTTGAATGCAACCTTGTATCTCATAATTTATACAATCTGCTCTAAAATATA TGGATCATGGTGATTTGTCTGCAGGAGTCTGGAGATTCTGAATAGAAAGCTAATTTTATCTTACATATCTGATTTGAATA GGGTTATTTGCCATTTTTTTCTTTGGTTTTCCACATACCCTTAGATGAAAAGAGGTATATTGACTACTTAAACAATTTAT ATTGATTATTGGTGATCAAAAACTTTTTGATTTACTTACTATATCAGCTATTTCTCAGCGATTGCCATCATTTTACTTAA AATTATTAGGTCTCTGTATGATTGCATTGAAATGGGAGCTGCAAAATATAATTGGTGTGTACAATATAGTGTTTTCTAAC TTTTGCATGAGATTTAGGGTTCTTTGATTCATGGTTATTCGTTGTTGCCTACTGCATTATCAAGGTGAGCAGTGAACTGA AATAAACTGTTATTCTCATTCATTTACAGGTTCAGCTAGAGCCCACATCTTCGTGGGCGTTACTACGCAAGGATTTGTCT AAACCTTCAAAATATACTGGCATGCTTCAAGCAACCAAAGACATTTTTAGAGAAGAAGGCATTCGGGTATTGTAACTCAG CTTCTATAATCATTGTTTAGTTTTCACCCTACTTTTTTCTTCTCTCCCTTAGTAATTTGCCTCTATTCCCATATCCCTTG AAATTTATTGGCTGTTGACCACATTAGTTTATGTTATAATGCTTGAATTTTTAAAAACATCTTCTCGAAGTTTCATGTCA ACCCTTTTTCTGGGGACAGTTTGTATTAACCTTTTTTATCTTACATATTATAGGGTTTTTGGCGGGGTAATGTGCCGGCT TTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTTTACACAAGTTAAAGACTTTTGCCTCTGGTTCTTCAAA GACAGGTATCCTATTTCACATTTCAATTGTTGCTCTGTAGCCTACCACATATTAGCCTGACGAGCACAACAAATTTATGA TTTATCTCCTGTCCTAGGTATCTGTATACTAAGTTTGTTTGCTGAGAACTAGGATGAGTTTTATCAAAACATTATAACTT TAAATATTAGGGCCATAAGTTATTGATATTCATTACTGTACAATGCTAACTTAAATATAGTTTTTTATGCGATTCACTAA TTTACTTTAATAAGGCACTTAATGGGAGAATGTTGTCTGGAGTTAATGGATGTATACATAGTTTACATGACAGGTCAACC GGTGTCCATTTGCACTTCATTGGTAGGAAATTTCCGATTCTAGATTTCTTTTTGATCATGGTCTTACTTCTGTTGCTGCA GAGAATCATATTAATTTGAGCCCTTACCTATCCTACATAAGTGGGGCATTAGCTGGGTGTGCAGCTACTGTGGGGTCATA TCCCTTTGATCTTCTTCGAACCATATTAGCTTCTCAGGGTGAGCCAAAGGTATGAGCATAATTTTTCTTAAGGATATTTG ACAGTTTTGAAGTCAATTACCGTGATATAAATTAGTGTTCTGAAGATCAGTGAAGGAAATTGCTGGCCTTCCTTTTGAAC ACCTCCATCCAGTCCATTTACTTCTGCTCTATCTCTCGATTTCCATGATGAACCTACATTCTCAGTCCTTTATCCATGGA AGCTTTATCTTGACTTTTTACTTTTTGTTCATTCTTTTTAGACTTGTTAGGTATGAAACTATTCATTTATCTGCACCTAA CTGCTTAAGATTTTGGAATACTTACCATGGTATTAGAGTCTATGTCTGAGTTGTCTAAGTGCAGTCTGAGGCTTTTGTGA TCCTTGTGGAGTTAGTTAATCTTGTAACTAGGCCATGCTAAATTTTTCCTCTCACTTAGGTTTATCCAAACATGAGGTCA GCTTCCATTGACATTTTCCGGACTCGTGGCTTCCCAGGCTTGTATGCTGGATTGACACCGACACTAATTGAGATTATACC TTATGCGGGCCTACAATTCGGCACCTATGATACATTCAAACGTTGGGCCATGGTAAAATTTTAGTCCTTCTATTTACATA AATATACCCTGCACCTGTTGGATATCATTTGGTTGCTATGAAACTATGTCAATACAAATTTGATTCACTTGTTAATTTGC AACATCATGCAAAGATAGAGTTGGATCCGTTTACAGGGCAAACAAATGCTTTACTTTTACTTTCTAATGAGCAATTCTCT GATAACTGTTCTTTTATCATGTATGCATCATGTGGAAAAATTGTAGGTGTGGAACCATCGCCACTATTCAAATGCTACTG CTGATGATAGCCTCTCTAGCTTTCAGCTTTTCCTTTGTGGGTTGGCAGCAGGAACATGTGCCAAGCTTGTATGTCATCCG CTGGACGTAGTCAAGAAAAGATTTCAGGTAGACGTTAGAATGTGCAACGCTCCCACCCACCTTCCCCGACCCCATGAAAA CTTGAACTTGTTCTGGCCTTATGCTGGTTAAATGGTGTCTGCACAGCTATTCTGTCCCTGACTTAATGTGTGATCTTTAT TCTTTGTTTGCTGCAGATTGAAGGTCTACAAAGGCATCCAAGATATGGAGCTCGGGTTGAACATCGTGCATACAAAAACA TGTTTGATGCGATGAAACGGATAATACAGATGGAGGGTTGGGCTGGTTTATATAAGGGTTTATTCCCATCAACTGTAAAA GCTGCACCAGCTGGTGCTGTAACATTTGTTGCATATGAATTGACGTCAGATTGGTTGGAGTCTGTTTGGACTTGATTTTT ATCACTTAACAGAAGGGAGAGAGATTATTATGATTTTTTTATCTCATTCTTTTCTACTTAATTAGTTCTCAGGATAGGAA GGAAGCACGAGATATGTGATAATTTATTTATGCTAAATACATTTGAAGCTGTAGTTGGTAATATTCAATCTCTTTTTTAA CACAGAAAATAGGTTAATAAAAGCTAACATCTACCACAGCACAATCATTTATCTTCTCTAGAAGGAGTGGTGCTCCAGCT CTTCTGAGTTCTGATTGTTGTTTTTGTTAACGTGACAATATTGAAGCTCAACCAGGTACGTTAAGGACATGAATCTCTGA AAGAAAGGAAAAAAGGCCAATCATGAAATGTAGAAGAAATTATACAGAATGTAAACATAACCTACATATTTTAGAGCAAA ATCTCAATCTGCTACTGTTTTATTGGAGATAAAGACTTGAATAGGGAAGATTGCTGTGAAGCATTGAAAAATGAACAAAC AAATATTCGACTTTTGGGTTACAAACCCTTATTCCAACTCTCACAAAAGGTAATTTTCCATCACAAGGTAATTTAATCTG TTGATATTATAAGGTCCTAACAAAATCTAAGTACTTGGGCCACACTATCACTTTTTAATACAGTAAAATACAAGTTGAAA GAAGTCCTTAGGCCAGAAACTTTGGCATCAACTTTCGGTAGAAGATAACCATATTTTTCAATGAGAAAGACACCTTTTGT AAGAGAGGGACCGGTTAGCAATGCTGGTAATGCTATTTATCTCGGCGTTTTGTTCTTATCTTCTTTGCTGCCTTCTGGAG GTTCAGATAGGAATTGCAAGATCCTCTGAATCTGAACAACATCAACCTGGAATTTTTCAGCAATCTGATGGGCATCCATT GGCCCATTGTGATCTTCAGCCTTGCCATTATGCAAGAGGATGATCTGGCGCAACTGTGCTACATTCAAAGTGCCTGTCGG GACTGGCCTTTCCTCATAACCGCCAGAATCTGGTTTTGTATTTCGTAATCTTGGCATGGGCCTCCTATACTTCTCAACCA GAAAGGCCTGTAACAATACAGACAGTGAGAATACTGAGATGAGCTTAGCTCAGTAAAATATGCACTAGTAAAAAGTAAAG AGTGACACAACTTTGTCCATTGATGCTGTGTCAGTCTTAATTTGGTAATCTGATTATTCTTCTTATAATTGCCTTTTGCC AAAAGCTTTCTAAAAAAGAAACCAATAAAGTGCTCCCCCACCCCCTCTAAAATATGGTAATCCAAACACATACTAAGGAT GCTTTAAAGTTGTTAGGTTCCCATGGATCATACTAATACCAACATAAACAATCAGGAGTTATAAAACATTGGCAATGTTA AAAAGAGTATTAGTGTATAAAATATGAACATTAAAACATACAGCAAAAAAGTATATCAAGCAAATATCAATTCATAGCAT GCAGCATTATTTTGGCAGATTTCCTTTCATCGGATAGGAGATGAACAAGCCAAGCCAATATACAGAAATGGGATCTCCAC ACTCTTTAATGCGAACAATACCATCTTCTAAGCAAGCATACACAGATCAACATTTAAAACAGTTTCAAACTTCAGAGGAG AAGTGTGATGAGCAAAACAACATAAAATGTTGGGAATTCTAAGGTGTAAACATTGAAATGGATAAGCATACATTACACCA ACTAAGATAACCTTTCTGCACCAACAGCCATTCTACAAAAGGAGAAAAGATAGTTTCCATAAAACTCACCTCCCCCATCT CAGATTTCCCCCCAGGCTTTGACTTAATCCTGCCAACCATCTGACCAAGCATAGCATCATATGAGGGGTCTCTTTCTTCC AGAATGTTGTCCACATTAACTCTAGGACGATCATCTTAAGACAATAACAAAATACAGCTGTATCAGCAACAATGAACTAT CATAACAGTATCATAAAACTCACACACACACCAAATTATTAGCAATACCTATCCAAACACACTGCAAAACAGACACAAAT TAAGATGAAGGGAAGCCTCACAGCTAAAATAACAGCTACAGCTAATAAGACCACAAAACCTGATGATATGCTCAGTATGC AAAGCAGAAAACAAGGAATGAAATGGAATGGGAAGGAAGATTTAGATGCTCACTGGCATAGAGGGGGTGGAAAATTGAAA ATCTACTCTTCTAGCTCACTTTCTTAACCATCAATGCAATGCCAGAAATAGTGCTATTGGAGCTAAAATGCAATTTGATT GAAACATGCAAGGTGTAAGTTATTTGAAACACTCCCCCATATTCAACCTATTCATTTTCAGCTGAACCAAGCACTAAAGG TATAAATTCCTAAAAAATTTCTATATGGTTAGAACAAATGTCTCAATTTCAAAATCAAAATTTTCCTCTCAAATAAACGG TTCTAATCACAAACACTCACATTGTTCAGGATTTTATTTGCGAATTTCCTAACATACTGGAACACAATCTAAAGATAACC CTCATTACCCAACAACGTTTGCGGCATTCTAAGAAGTGAAAGCATGTGAAATGAGATTTTTTTTTT
CDS sequence (LotjaGi6g1v0248600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAAGGAGGAGCCCAGCCAGATGAAGCGTGCCATGATTGATTCTTCTGCTGGGGCTATTTCTGGTGGGATATCAAG GACAGTTACCTCTCCTCTTGATGTTATTAAGATTAGGTTCCAGGTTCAGCTAGAGCCCACATCTTCGTGGGCGTTACTAC GCAAGGATTTGTCTAAACCTTCAAAATATACTGGCATGCTTCAAGCAACCAAAGACATTTTTAGAGAAGAAGGCATTCGG GGTTTTTGGCGGGGTAATGTGCCGGCTTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTTTACACAAGTT AAAGACTTTTGCCTCTGGTTCTTCAAAGACAGAGAATCATATTAATTTGAGCCCTTACCTATCCTACATAAGTGGGGCAT TAGCTGGGTGTGCAGCTACTGTGGGGTCATATCCCTTTGATCTTCTTCGAACCATATTAGCTTCTCAGGGTGAGCCAAAG GTTTATCCAAACATGAGGTCAGCTTCCATTGACATTTTCCGGACTCGTGGCTTCCCAGGCTTGTATGCTGGATTGACACC GACACTAATTGAGATTATACCTTATGCGGGCCTACAATTCGGCACCTATGATACATTCAAACGTTGGGCCATGGTGTGGA ACCATCGCCACTATTCAAATGCTACTGCTGATGATAGCCTCTCTAGCTTTCAGCTTTTCCTTTGTGGGTTGGCAGCAGGA ACATGTGCCAAGCTTGTATGTCATCCGCTGGACGTAGTCAAGAAAAGATTTCAGATTGAAGGTCTACAAAGGCATCCAAG ATATGGAGCTCGGGTTGAACATCGTGCATACAAAAACATGTTTGATGCGATGAAACGGATAATACAGATGGAGGGTTGGG CTGGTTTATATAAGGGTTTATTCCCATCAACTGTAAAAGCTGCACCAGCTGGTGCTGTAACATTTGTTGCATATGAATTG ACGTCAGATTGGTTGGAGTCTGTTTGGACTTGA
Protein sequence (LotjaGi6g1v0248600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKEEPSQMKRAMIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLSKPSKYTGMLQATKDIFREEGIR GFWRGNVPALLMVMPYTAIQFTVLHKLKTFASGSSKTENHINLSPYLSYISGALAGCAATVGSYPFDLLRTILASQGEPK VYPNMRSASIDIFRTRGFPGLYAGLTPTLIEIIPYAGLQFGTYDTFKRWAMVWNHRHYSNATADDSLSSFQLFLCGLAAG TCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMFDAMKRIIQMEGWAGLYKGLFPSTVKAAPAGAVTFVAYEL TSDWLESVWT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 327 | 324 | 2.9E-197 | – | |
| PANTHER | 4 | 327 | 324 | 2.9E-197 | – | |
| Gene3D | 5 | 327 | 323 | 2.5E-88 | ||
| SUPERFAMILY | 9 | 319 | 311 | 3.4E-82 | ||
| ProSiteProfiles | 10 | 110 | 101 | 28.498 | ||
| Pfam | 15 | 111 | 97 | 3.1E-22 | ||
| PRINTS | 15 | 28 | 14 | 2.1E-21 | ||
| PRINTS | 28 | 42 | 15 | 2.1E-21 | ||
| PRINTS | 85 | 105 | 21 | 2.1E-21 | ||
| ProSiteProfiles | 123 | 209 | 87 | 22.77 | ||
| Pfam | 124 | 210 | 87 | 4.3E-19 | ||
| PRINTS | 138 | 156 | 19 | 2.1E-21 | ||
| PRINTS | 182 | 200 | 19 | 2.1E-21 | ||
| Pfam | 227 | 325 | 99 | 1.5E-22 | ||
| ProSiteProfiles | 227 | 324 | 98 | 24.315 | ||
| PRINTS | 236 | 258 | 23 | 2.1E-21 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0248600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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