Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0248600 |
| Transcript ID | LotjaGi6g1v0248600.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein-like; TAIR: AT5G48970.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|Q9HC21|TPC_HUMAN Mitochondrial thiamine pyrophosphate carrier; TrEMBL-Plants: tr|I1L112|I1L112_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0248600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:56077976..56081145) extracted from Lotus japonicus Gifu genome v1.2.
GGAGAAGGAGGAGCCCAGCCAGATGAAGCGTGCCATGATTGATTCTTCTGCTGGGGCTATTTCTGGTGGGATATCAAGGA CAGTTACCTCTCCTCTTGATGTTATTAAGATTAGGTTCCAGGTATGAATTTTTGTCATAACAATTTCAAATTCATCTTTG TACTTATTAGGAAAATACATCTCACTTTGGAAATTAATTAAGTTGGTCAATTGTAAGCTTTTGCTTGAAATGATTTTCAA TATTTAATTTATGAACAACATACTTGATGCAGCAATGTGTCTTTATTTGTGATTTGAGAATGCTGGCCTTGTTATTGAGC TAATTTTACCTGATGTGATGGGGGGTTACTTACAGTTTAAATTTGATAGGTATATGTCAAAGGACTGTGGCTATCTAGCG TTTGCTTGAATGCAACCTTGTATCTCATAATTTATACAATCTGCTCTAAAATATATGGATCATGGTGATTTGTCTGCAGG AGTCTGGAGATTCTGAATAGAAAGCTAATTTTATCTTACATATCTGATTTGAATAGGGTTATTTGCCATTTTTTTCTTTG GTTTTCCACATACCCTTAGATGAAAAGAGGTATATTGACTACTTAAACAATTTATATTGATTATTGGTGATCAAAAACTT TTTGATTTACTTACTATATCAGCTATTTCTCAGCGATTGCCATCATTTTACTTAAAATTATTAGGTCTCTGTATGATTGC ATTGAAATGGGAGCTGCAAAATATAATTGGTGTGTACAATATAGTGTTTTCTAACTTTTGCATGAGATTTAGGGTTCTTT GATTCATGGTTATTCGTTGTTGCCTACTGCATTATCAAGGTGAGCAGTGAACTGAAATAAACTGTTATTCTCATTCATTT ACAGGTTCAGCTAGAGCCCACATCTTCGTGGGCGTTACTACGCAAGGATTTGTCTAAACCTTCAAAATATACTGGCATGC TTCAAGCAACCAAAGACATTTTTAGAGAAGAAGGCATTCGGGTATTGTAACTCAGCTTCTATAATCATTGTTTAGTTTTC ACCCTACTTTTTTCTTCTCTCCCTTAGTAATTTGCCTCTATTCCCATATCCCTTGAAATTTATTGGCTGTTGACCACATT AGTTTATGTTATAATGCTTGAATTTTTAAAAACATCTTCTCGAAGTTTCATGTCAACCCTTTTTCTGGGGACAGTTTGTA TTAACCTTTTTTATCTTACATATTATAGGGTTTTTGGCGGGGTAATGTGCCGGCTTTGCTCATGGTTATGCCATATACAG CTATACAATTTACTGTTTTACACAAGTTAAAGACTTTTGCCTCTGGTTCTTCAAAGACAGGTATCCTATTTCACATTTCA ATTGTTGCTCTGTAGCCTACCACATATTAGCCTGACGAGCACAACAAATTTATGATTTATCTCCTGTCCTAGGTATCTGT ATACTAAGTTTGTTTGCTGAGAACTAGGATGAGTTTTATCAAAACATTATAACTTTAAATATTAGGGCCATAAGTTATTG ATATTCATTACTGTACAATGCTAACTTAAATATAGTTTTTTATGCGATTCACTAATTTACTTTAATAAGGCACTTAATGG GAGAATGTTGTCTGGAGTTAATGGATGTATACATAGTTTACATGACAGGTCAACCGGTGTCCATTTGCACTTCATTGGTA GGAAATTTCCGATTCTAGATTTCTTTTTGATCATGGTCTTACTTCTGTTGCTGCAGAGAATCATATTAATTTGAGCCCTT ACCTATCCTACATAAGTGGGGCATTAGCTGGGTGTGCAGCTACTGTGGGGTCATATCCCTTTGATCTTCTTCGAACCATA TTAGCTTCTCAGGGTGAGCCAAAGGTATGAGCATAATTTTTCTTAAGGATATTTGACAGTTTTGAAGTCAATTACCGTGA TATAAATTAGTGTTCTGAAGATCAGTGAAGGAAATTGCTGGCCTTCCTTTTGAACACCTCCATCCAGTCCATTTACTTCT GCTCTATCTCTCGATTTCCATGATGAACCTACATTCTCAGTCCTTTATCCATGGAAGCTTTATCTTGACTTTTTACTTTT TGTTCATTCTTTTTAGACTTGTTAGGTATGAAACTATTCATTTATCTGCACCTAACTGCTTAAGATTTTGGAATACTTAC CATGGTATTAGAGTCTATGTCTGAGTTGTCTAAGTGCAGTCTGAGGCTTTTGTGATCCTTGTGGAGTTAGTTAATCTTGT AACTAGGCCATGCTAAATTTTTCCTCTCACTTAGGTTTATCCAAACATGAGGTCAGCTTCCATTGACATTTTCCGGACTC GTGGCTTCCCAGGCTTGTATGCTGGATTGACACCGACACTAATTGAGATTATACCTTATGCGGGCCTACAATTCGGCACC TATGATACATTCAAACGTTGGGCCATGGTAAAATTTTAGTCCTTCTATTTACATAAATATACCCTGCACCTGTTGGATAT CATTTGGTTGCTATGAAACTATGTCAATACAAATTTGATTCACTTGTTAATTTGCAACATCATGCAAAGATAGAGTTGGA TCCGTTTACAGGGCAAACAAATGCTTTACTTTTACTTTCTAATGAGCAATTCTCTGATAACTGTTCTTTTATCATGTATG CATCATGTGGAAAAATTGTAGGTGTGGAACCATCGCCACTATTCAAATGCTACTGCTGATGATAGCCTCTCTAGCTTTCA GCTTTTCCTTTGTGGGTTGGCAGCAGGAACATGTGCCAAGCTTGTATGTCATCCGCTGGACGTAGTCAAGAAAAGATTTC AGGTAGACGTTAGAATGTGCAACGCTCCCACCCACCTTCCCCGACCCCATGAAAACTTGAACTTGTTCTGGCCTTATGCT GGTTAAATGGTGTCTGCACAGCTATTCTGTCCCTGACTTAATGTGTGATCTTTATTCTTTGTTTGCTGCAGATTGAAGGT CTACAAAGGCATCCAAGATATGGAGCTCGGGTTGAACATCGTGCATACAAAAACATGTTTGATGCGATGAAACGGATAAT ACAGATGGAGGGTTGGGCTGGTTTATATAAGGGTTTATTCCCATCAACTGTAAAAGCTGCACCAGCTGGTGCTGTAACAT TTGTTGCATATGAATTGACGTCAGATTGGTTGGAGTCTGTTTGGACTTGA
CDS sequence (LotjaGi6g1v0248600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGCGTGCCATGATTGATTCTTCTGCTGGGGCTATTTCTGGTGGGATATCAAGGACAGTTACCTCTCCTCTTGATGT TATTAAGATTAGGTTCCAGGTTCAGCTAGAGCCCACATCTTCGTGGGCGTTACTACGCAAGGATTTGTCTAAACCTTCAA AATATACTGGCATGCTTCAAGCAACCAAAGACATTTTTAGAGAAGAAGGCATTCGGGGTTTTTGGCGGGGTAATGTGCCG GCTTTGCTCATGGTTATGCCATATACAGCTATACAATTTACTGTTTTACACAAGTTAAAGACTTTTGCCTCTGGTTCTTC AAAGACAGAGAATCATATTAATTTGAGCCCTTACCTATCCTACATAAGTGGGGCATTAGCTGGGTGTGCAGCTACTGTGG GGTCATATCCCTTTGATCTTCTTCGAACCATATTAGCTTCTCAGGGTGAGCCAAAGGTGTGGAACCATCGCCACTATTCA AATGCTACTGCTGATGATAGCCTCTCTAGCTTTCAGCTTTTCCTTTGTGGGTTGGCAGCAGGAACATGTGCCAAGCTTGT ATGTCATCCGCTGGACGTAGTCAAGAAAAGATTTCAGATTGAAGGTCTACAAAGGCATCCAAGATATGGAGCTCGGGTTG AACATCGTGCATACAAAAACATGTTTGATGCGATGAAACGGATAATACAGATGGAGGGTTGGGCTGGTTTATATAAGGGT TTATTCCCATCAACTGTAAAAGCTGCACCAGCTGGTGCTGTAACATTTGTTGCATATGAATTGACGTCAGATTGGTTGGA GTCTGTTTGGACTTGA
Protein sequence (LotjaGi6g1v0248600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKRAMIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSSWALLRKDLSKPSKYTGMLQATKDIFREEGIRGFWRGNVP ALLMVMPYTAIQFTVLHKLKTFASGSSKTENHINLSPYLSYISGALAGCAATVGSYPFDLLRTILASQGEPKVWNHRHYS NATADDSLSSFQLFLCGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYKNMFDAMKRIIQMEGWAGLYKG LFPSTVKAAPAGAVTFVAYELTSDWLESVWT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 151 | 151 | 7.3E-154 | – | |
| PANTHER | 1 | 151 | 151 | 7.3E-154 | – | |
| ProSiteProfiles | 2 | 102 | 101 | 28.498 | ||
| Gene3D | 3 | 159 | 157 | 1.7E-40 | ||
| SUPERFAMILY | 4 | 261 | 258 | 5.49E-63 | ||
| PRINTS | 7 | 20 | 14 | 2.6E-10 | ||
| Pfam | 8 | 103 | 96 | 2.4E-22 | ||
| PRINTS | 20 | 34 | 15 | 2.6E-10 | ||
| PRINTS | 77 | 97 | 21 | 2.6E-10 | ||
| PRINTS | 130 | 148 | 19 | 2.6E-10 | ||
| PANTHER | 153 | 268 | 116 | 7.3E-154 | – | |
| PANTHER | 153 | 268 | 116 | 7.3E-154 | – | |
| Gene3D | 160 | 270 | 111 | 2.6E-27 | ||
| Pfam | 168 | 266 | 99 | 1.0E-22 | ||
| ProSiteProfiles | 168 | 265 | 98 | 24.315 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi6g1v0248600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…