Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR023313
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 116 results. Now displaying 3 of 3 with 50 rows per page. This search has taken 6.605s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0146800.4
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G64230.4 ubiquitin-conjugating enzyme 28; Swiss-Prot: sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28; TrEMBL-Plants: tr|I3SB11|I3SB11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146800 LjG1.1_chr4 23723768 23725708 +
2 domain predictions
 –
LotjaGi4g1v0146800.5
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G64230.4 ubiquitin-conjugating enzyme 28; Swiss-Prot: sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28; TrEMBL-Plants: tr|I3SB11|I3SB11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146800 LjG1.1_chr4 23724378 23725708 +
2 domain predictions
 –
LotjaGi4g1v0146800.6
n.a. Ubiquitin-conjugating enzyme E2, putative; TAIR: AT5G41700.1 ubiquitin conjugating enzyme 8; Swiss-Prot: sp|P35131|UBC8_ARATH Ubiquitin-conjugating enzyme E2 8; TrEMBL-Plants: tr|I3SB11|I3SB11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146800 LjG1.1_chr4 23724452 23725708 +
2 domain predictions
 –
LotjaGi4g1v0146800.7
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G64230.4 ubiquitin-conjugating enzyme 28; Swiss-Prot: sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28; TrEMBL-Plants: tr|I3SB11|I3SB11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146800 LjG1.1_chr4 23724679 23725708 +
2 domain predictions
 –
LotjaGi4g1v0146900.1
n.a. Ubiquitin-conjugating enzyme E2, putative; TAIR: AT1G64230.1 ubiquitin-conjugating enzyme 28; Swiss-Prot: sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28; TrEMBL-Plants: tr|I3SB11|I3SB11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146900 LjG1.1_chr4 23732334 23735425 +
2 domain predictions
 –
LotjaGi4g1v0146900.2
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G64230.4 ubiquitin-conjugating enzyme 28; Swiss-Prot: sp|Q94F47|UBC28_ARATH Ubiquitin-conjugating enzyme E2 28; TrEMBL-Plants: tr|I3SB11|I3SB11_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0146900 LjG1.1_chr4 23732679 23734928 +
2 domain predictions
 –
LotjaGi4g1v0238800.1
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G63800.1 ubiquitin-conjugating enzyme 5; Swiss-Prot: sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa; TrEMBL-Plants: tr|I3SV59|I3SV59_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0238800 LjG1.1_chr4 55483722 55491280 +
2 domain predictions
 –
LotjaGi4g1v0238800.2
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT5G41340.1 ubiquitin conjugating enzyme 4; Swiss-Prot: sp|P42748|UBC4_ARATH Ubiquitin-conjugating enzyme E2 4; TrEMBL-Plants: tr|I3SV59|I3SV59_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0238800 LjG1.1_chr4 55488316 55489867 +
2 domain predictions
 –
LotjaGi4g1v0238800.3
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G63800.1 ubiquitin-conjugating enzyme 5; Swiss-Prot: sp|P16577|UBC4_WHEAT Ubiquitin-conjugating enzyme E2-23 kDa; TrEMBL-Plants: tr|I3SV59|I3SV59_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0238800 LjG1.1_chr4 55488316 55490346 +
2 domain predictions
 –
LotjaGi4g1v0247600.1
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT2G02760.1 ubiquiting-conjugating enzyme 2; Swiss-Prot: sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2; TrEMBL-Plants: tr|A0A0A0KQJ6|A0A0A0KQJ6_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0247600 LjG1.1_chr4 59904570 59909099 +
2 domain predictions
 –
LotjaGi4g1v0247600.2
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT2G02760.1 ubiquiting-conjugating enzyme 2; Swiss-Prot: sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2; TrEMBL-Plants: tr|A0A0A0KQJ6|A0A0A0KQJ6_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0247600 LjG1.1_chr4 59904916 59907739 +
2 domain predictions
 –
LotjaGi4g1v0247600.3
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT2G02760.1 ubiquiting-conjugating enzyme 2; Swiss-Prot: sp|P42745|UBC2_ARATH Ubiquitin-conjugating enzyme E2 2; TrEMBL-Plants: tr|A0A0A0KQJ6|A0A0A0KQJ6_CUCSA Uncharacterized protein; Found in the gene: LotjaGi4g1v0247600 LjG1.1_chr4 59905166 59907739 +
2 domain predictions
 –
LotjaGi4g1v0428400.1
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G63800.1 ubiquitin-conjugating enzyme 5; Swiss-Prot: sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5; TrEMBL-Plants: tr|I3SXR9|I3SXR9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0428400 LjG1.1_chr4 80274064 80277477 -
2 domain predictions
 –
LotjaGi4g1v0428400.2
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT1G63800.1 ubiquitin-conjugating enzyme 5; Swiss-Prot: sp|P42749|UBC5_ARATH Ubiquitin-conjugating enzyme E2 5; TrEMBL-Plants: tr|I3SXR9|I3SXR9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0428400 LjG1.1_chr4 80274296 80277499 -
2 domain predictions
 –
LotjaGi5g1v0275800.1
n.a. Ubiquitin-conjugating enzyme E2; TAIR: AT3G20060.1 ubiquitin-conjugating enzyme19; Swiss-Prot: sp|Q9LJZ5|UBC19_ARATH Ubiquitin-conjugating enzyme E2 19; TrEMBL-Plants: tr|A0A0B2P012|A0A0B2P012_GLYSO Ubiquitin-conjugating enzyme E2 19; Found in the gene: LotjaGi5g1v0275800 LjG1.1_chr5 59001426 59004609 -
2 domain predictions
 –
LotjaGi6g1v0044700.1
n.a. Ubiquitin-conjugating enzyme E2, putative; TAIR: AT1G64230.1 ubiquitin-conjugating enzyme 28; Swiss-Prot: sp|P35135|UBC4_SOLLC Ubiquitin-conjugating enzyme E2-17 kDa; TrEMBL-Plants: tr|B9SLF2|B9SLF2_RICCO Ubiquitin-conjugating enzyme E2, putative; Found in the gene: LotjaGi6g1v0044700 LjG1.1_chr6 8407433 8411574 -
2 domain predictions
 –