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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR043128
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We have found 339 results. Now displaying 6 of 7 with 50 rows per page. This search has taken 5.782s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi5g1v0127600_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127600_LC LjG1.1_chr5 28289875 28292028 -
2 domain predictions
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LotjaGi5g1v0127900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0127900_LC LjG1.1_chr5 28388182 28390335 +
2 domain predictions
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LotjaGi5g1v0128000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128000_LC LjG1.1_chr5 28394432 28396585 -
2 domain predictions
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LotjaGi5g1v0128100_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128100_LC LjG1.1_chr5 28446449 28448602 +
2 domain predictions
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LotjaGi5g1v0128200_LC.2
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151UF56|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0128200_LC LjG1.1_chr5 28497127 28499211 -
2 domain predictions
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LotjaGi5g1v0128300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128300_LC LjG1.1_chr5 28544483 28546636 +
2 domain predictions
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LotjaGi5g1v0128400_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128400_LC LjG1.1_chr5 28649646 28651799 -
2 domain predictions
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LotjaGi5g1v0128500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128500_LC LjG1.1_chr5 28673117 28675270 +
2 domain predictions
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LotjaGi5g1v0128600_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151R7Z9|A0A151R7Z9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0128600_LC LjG1.1_chr5 28755244 28757397 +
2 domain predictions
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LotjaGi5g1v0128700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128700_LC LjG1.1_chr5 28797350 28799504 -
2 domain predictions
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LotjaGi5g1v0128800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128800_LC LjG1.1_chr5 28865926 28868080 +
2 domain predictions
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LotjaGi5g1v0128900_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0128900_LC LjG1.1_chr5 28891729 28893882 -
2 domain predictions
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LotjaGi5g1v0129000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129000_LC LjG1.1_chr5 29019833 29021986 -
2 domain predictions
 –
LotjaGi5g1v0129100_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129100_LC LjG1.1_chr5 29066720 29068872 +
2 domain predictions
 –
LotjaGi5g1v0129200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129200_LC LjG1.1_chr5 29111690 29113843 -
2 domain predictions
 –
LotjaGi5g1v0129300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129300_LC LjG1.1_chr5 29173471 29175624 +
2 domain predictions
 –
LotjaGi5g1v0129400.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129400 LjG1.1_chr5 29299391 29301545 -
2 domain predictions
 –
LotjaGi5g1v0129500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129500_LC LjG1.1_chr5 29330294 29332447 +
2 domain predictions
 –
LotjaGi5g1v0129900.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0129900 LjG1.1_chr5 29398041 29400193 -
2 domain predictions
 –
LotjaGi5g1v0130000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0130000_LC LjG1.1_chr5 29481214 29483367 +
2 domain predictions
 –
LotjaGi5g1v0130300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151TP24|A0A151TP24_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0130300_LC LjG1.1_chr5 29628865 29631016 +
2 domain predictions
 –
LotjaGi5g1v0131200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0131200_LC LjG1.1_chr5 29995776 29997929 -
2 domain predictions
 –
LotjaGi5g1v0132300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0132300_LC LjG1.1_chr5 30914920 30917073 -
2 domain predictions
 –
LotjaGi5g1v0133200_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0133200_LC LjG1.1_chr5 31280405 31282558 +
2 domain predictions
 –
LotjaGi5g1v0134500_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0134500_LC LjG1.1_chr5 31860010 31862163 -
2 domain predictions
 –
LotjaGi5g1v0139000_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P10394|POL4_DROME Retrovirus-related Pol polyprotein from transposon 412; TrEMBL-Plants: tr|A0A151QLZ0|A0A151QLZ0_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0139000_LC LjG1.1_chr5 33533842 33534299 -
2 domain predictions
 –
LotjaGi5g1v0142000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0142000_LC LjG1.1_chr5 35245840 35247993 -
2 domain predictions
 –
LotjaGi5g1v0143700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0143700_LC LjG1.1_chr5 35994027 35996180 -
2 domain predictions
 –
LotjaGi5g1v0150900_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|B5U9W1|B5U9W1_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0150900_LC LjG1.1_chr5 39227382 39232326 +
2 domain predictions
 –
LotjaGi5g1v0160800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|Q6F2D6|Q6F2D6_SOLDE Putative polyprotein, identical; Found in the gene: LotjaGi5g1v0160800_LC LjG1.1_chr5 41141650 41152009 -
2 domain predictions
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LotjaGi5g1v0166000_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon gypsy; TAIR: AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151QTT3|A0A151QTT3_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0166000_LC LjG1.1_chr5 42361117 42383649 -
2 domain predictions
 –
LotjaGi5g1v0166000_LC.3
n.a. Retrovirus-related Pol polyprotein from transposon gypsy; TAIR: AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein; Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151QTT3|A0A151QTT3_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0166000_LC LjG1.1_chr5 42362938 42371553 -
2 domain predictions
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LotjaGi5g1v0166000_LC.4
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151RZR6|A0A151RZR6_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0166000_LC LjG1.1_chr5 42362938 42371553 -
2 domain predictions
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LotjaGi5g1v0170900_LC.1
n.a. Gag-Pol polyprotein; TAIR: AT1G25380.1 NAD+ transporter 2; Swiss-Prot: sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151R7X5|A0A151R7X5_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0170900_LC LjG1.1_chr5 43955881 43956761 +
2 domain predictions
 –
LotjaGi5g1v0172000_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00850.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A061G943|A0A061G943_THECC Uncharacterized protein; Found in the gene: LotjaGi5g1v0172000_LC LjG1.1_chr5 44029016 44029870 -
2 domain predictions
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LotjaGi5g1v0181100_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A151UF56|A0A151UF56_CAJCA Transposon Ty3-I Gag-Pol polyprotein; Found in the gene: LotjaGi5g1v0181100_LC LjG1.1_chr5 46213727 46215881 -
2 domain predictions
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LotjaGi5g1v0192100_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr|A0A151RAW9|A0A151RAW9_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi5g1v0192100_LC LjG1.1_chr5 48540962 48541355 +
2 domain predictions
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LotjaGi5g1v0200800_LC.1
n.a. Transposon Ty3-G Gag-Pol polyprotein; TAIR: AT1G17250.1 receptor like protein 3; Swiss-Prot: sp|Q9UR07|TF211_SCHPO Transposon Tf2-11 polyprotein; TrEMBL-Plants: tr|A0A151R7E6|A0A151R7E6_CAJCA Retrotransposable element Tf2; Found in the gene: LotjaGi5g1v0200800_LC LjG1.1_chr5 49984024 49986394 -
2 domain predictions
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LotjaGi5g1v0277700_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0277700_LC LjG1.1_chr5 59285700 59287853 +
2 domain predictions
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LotjaGi5g1v0283400_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi5g1v0283400_LC LjG1.1_chr5 59989763 59991916 -
2 domain predictions
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LotjaGi5g1v0343500_LC.1
n.a. Retrotransposon protein, putative, Ty3-gypsy subclass; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P0CT41|TF212_SCHPO Transposon Tf2-12 polyprotein; TrEMBL-Plants: tr|A2Q2C7|A2Q2C7_MEDTR RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc finger, CCHC-type; Peptidase aspartic, active site; Polynucleotidyl transferase, Ribonuclease H fold; Found in the gene: LotjaGi5g1v0343500_LC LjG1.1_chr5 66071617 66076552 +
2 domain predictions
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LotjaGi5g1v0348800_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon TNT 1-94; TAIR: AT4G23160.2 cysteine-rich RECEPTOR-like kinase; Swiss-Prot: sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94; TrEMBL-Plants: tr|A5AV91|A5AV91_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0348800_LC LjG1.1_chr5 66458794 66461242 +
2 domain predictions
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LotjaGi6g1v0063200_LC.3
n.a. Retrovirus-related Pol polyprotein from transposon 297 family; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q8I7P9|POL5_DROME Retrovirus-related Pol polyprotein from transposon opus; TrEMBL-Plants: tr|A0A151U9S6|A0A151U9S6_CAJCA Retrovirus-related Pol polyprotein from transposon 17.6; Found in the gene: LotjaGi6g1v0063200_LC LjG1.1_chr6 11648444 11652201 -
2 domain predictions
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LotjaGi6g1v0065300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0065300_LC LjG1.1_chr6 12197124 12199277 -
2 domain predictions
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LotjaGi6g1v0065500_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein; TrEMBL-Plants: tr|A0A151SAS8|A0A151SAS8_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0065500_LC LjG1.1_chr6 12362285 12363470 -
2 domain predictions
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LotjaGi6g1v0098300_LC.1
n.a. Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P92523|M860_ARATH Uncharacterized mitochondrial protein AtMg00860; TrEMBL-Plants: tr|Q3C0I2|Q3C0I2_LOTJA Putative uncharacterized protein; Found in the gene: LotjaGi6g1v0098300_LC LjG1.1_chr6 21299864 21300220 +
2 domain predictions
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LotjaGi6g1v0098800_LC.1
n.a. Gag-pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151SJ80|A0A151SJ80_CAJCA Transposon Ty3-G Gag-Pol polyprotein; Found in the gene: LotjaGi6g1v0098800_LC LjG1.1_chr6 21379748 21380699 +
2 domain predictions
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LotjaGi6g1v0103300_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0103300_LC LjG1.1_chr6 22701541 22703694 +
2 domain predictions
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LotjaGi6g1v0107800_LC.1
n.a. Transposon Ty3-I Gag-Pol polyprotein; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from transposon 17.6; TrEMBL-Plants: tr|A0A178U8C0|A0A178U8C0_ARATH Uncharacterized protein; Found in the gene: LotjaGi6g1v0107800_LC LjG1.1_chr6 24583534 24585687 -
2 domain predictions
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LotjaGi6g1v0110500_LC.1
n.a. Retrovirus-related Pol polyprotein from transposon 17.6; TAIR: ATMG00860.1 DNA/RNA polymerases superfamily protein (ChrM); Swiss-Prot: sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from transposon 297; TrEMBL-Plants: tr|A0A151U7M3|A0A151U7M3_CAJCA Retrovirus-related Pol polyprotein from transposon 297 family; Found in the gene: LotjaGi6g1v0110500_LC LjG1.1_chr6 25522438 25523053 +
2 domain predictions
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