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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000132
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.088s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0205259.1
n.a. PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4A-like [Glycine max] gi|356539229|ref|XP_003538102.1| chr0 102092412 102093287 -
2 domain predictions
1 GO term
Lj3g3v2981810.1
n.a. PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4A-like [Glycine max] gi|356539229|ref|XP_003538102.1| chr3 36882298 36892431 +
3 domain predictions
1 GO term
Lj3g3v2981810.3
n.a. PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4A-like [Glycine max] gi|356539229|ref|XP_003538102.1| chr3 36882298 36885174 +
3 domain predictions
1 GO term
Lj3g3v2981810.4
n.a. PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4A-like [Glycine max] gi|356539229|ref|XP_003538102.1| chr3 36882298 36892431 +
3 domain predictions
1 GO term
Lj3g3v2981830.1
n.a. PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4B-like [Vitis vinifera] gi|225464870|ref|XP_002272837.1| chr3 36887764 36893403 +
2 domain predictions
1 GO term
LotjaGi3g1v0474600.1
n.a. Nitrilase, putative; TAIR: AT5G22300.1 nitrilase 4; Swiss-Prot: sp|Q5QGZ8|NRL4A_LUPAN Bifunctional nitrilase/nitrile hydratase NIT4A; TrEMBL-Plants: tr|I3SLY0|I3SLY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0474600 LjG1.1_chr3 89102934 89109380 +
3 domain predictions
1 GO term
LotjaGi3g1v0474600.2
n.a. Nitrilase, putative; TAIR: AT5G22300.1 nitrilase 4; Swiss-Prot: sp|Q5QGZ8|NRL4A_LUPAN Bifunctional nitrilase/nitrile hydratase NIT4A; TrEMBL-Plants: tr|I3SLY0|I3SLY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0474600 LjG1.1_chr3 89105488 89113976 +
3 domain predictions
1 GO term
LotjaGi3g1v0474600.3
n.a. Nitrilase, putative; TAIR: AT5G22300.1 nitrilase 4; Swiss-Prot: sp|Q5QGZ8|NRL4A_LUPAN Bifunctional nitrilase/nitrile hydratase NIT4A; TrEMBL-Plants: tr|I3SLY0|I3SLY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0474600 LjG1.1_chr3 89105581 89113892 +
3 domain predictions
1 GO term
LotjaGi3g1v0474600.4
n.a. Nitrilase, putative; TAIR: AT5G22300.1 nitrilase 4; Swiss-Prot: sp|Q5QGZ8|NRL4A_LUPAN Bifunctional nitrilase/nitrile hydratase NIT4A; TrEMBL-Plants: tr|I3SLY0|I3SLY0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0474600 LjG1.1_chr3 89111145 89113564 +
2 domain predictions
1 GO term