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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000589
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 9 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 8.052s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0214329.1
n.a. 40S ribosomal protein S13 [Glycine max] gi|351722010|ref|NP_001237229.1| chr0 108570259 108572651 -
5 domain predictions
3 GO terms
Lj3g3v2171540.1
n.a. 30S ribosomal protein S15 [Medicago truncatula] gi|357468029|ref|XP_003604299.1| chr3 26898789 26903318 -
4 domain predictions
3 GO terms
Lj3g3v2171540.2
n.a. 30S ribosomal protein S15 [Medicago truncatula] gi|357468029|ref|XP_003604299.1| chr3 26901977 26903318 -
2 domain predictions
3 GO terms
Lj3g3v2736240.1
n.a. 40S ribosomal protein S13 [Glycine max] gi|351722010|ref|NP_001237229.1| chr3 33728201 33730512 +
5 domain predictions
3 GO terms
LotjaGi3g1v0352400.1
n.a. 30S ribosomal protein S15; TAIR: AT1G80620.1 S15/NS1, RNA-binding protein; Swiss-Prot: sp|B7IFB5|RS15_THEAB 30S ribosomal protein S15; TrEMBL-Plants: tr|M5WYW8|M5WYW8_PRUPE Uncharacterized protein; Found in the gene: LotjaGi3g1v0352400 LjG1.1_chr3 73197842 73203155 -
4 domain predictions
3 GO terms
LotjaGi3g1v0434000.1
n.a. 40S ribosomal protein S13; TAIR: AT4G00100.1 ribosomal protein S13A; Swiss-Prot: sp|P62302|RS13_SOYBN 40S ribosomal protein S13; TrEMBL-Plants: tr|I3T8Q2|I3T8Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0434000 LjG1.1_chr3 84542988 84546007 +
5 domain predictions
3 GO terms
LotjaGi3g1v0434000.2
n.a. 40S ribosomal protein S13; TAIR: AT4G00100.1 ribosomal protein S13A; Swiss-Prot: sp|P62302|RS13_SOYBN 40S ribosomal protein S13; TrEMBL-Plants: tr|I3T8Q2|I3T8Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0434000 LjG1.1_chr3 84543142 84544732 +
5 domain predictions
3 GO terms
LotjaGi4g1v0214100.1
n.a. 40S ribosomal protein S13; TAIR: AT4G00100.1 ribosomal protein S13A; Swiss-Prot: sp|P62302|RS13_SOYBN 40S ribosomal protein S13; TrEMBL-Plants: tr|I3T8Q2|I3T8Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0214100 LjG1.1_chr4 49743924 49746881 +
5 domain predictions
3 GO terms
LotjaGi4g1v0214100.2
n.a. 40S ribosomal protein S13; TAIR: AT4G00100.1 ribosomal protein S13A; Swiss-Prot: sp|P62302|RS13_SOYBN 40S ribosomal protein S13; TrEMBL-Plants: tr|I3T8Q2|I3T8Q2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0214100 LjG1.1_chr4 49744053 49744781 +
5 domain predictions
3 GO terms