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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000858
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 148 results. Now displaying 1 of 3 with 50 rows per page. This search has taken 6.001s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0042119.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166655|ref|XP_004513948.1| chr0 13849269 13851390 -
2 domain predictions
1 GO term
Lj0g3v0059499.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166662|ref|XP_004513950.1| chr0 19683288 19688507 +
2 domain predictions
1 GO term
Lj0g3v0059509.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr0 19690149 19694423 +
2 domain predictions
1 GO term
Lj0g3v0112879.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356530645|ref|XP_003533891.1| chr0 49267932 49271244 +
2 domain predictions
1 GO term
Lj0g3v0112879.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502166659|ref|XP_004513949.1| chr0 49268904 49272257 +
2 domain predictions
1 GO term
Lj0g3v0129129.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514945|ref|XP_003526162.1| chr0 58411938 58415932 -
2 domain predictions
1 GO term
Lj0g3v0132429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514903|ref|XP_003526141.1| chr0 60436549 60444443 +
2 domain predictions
1 GO term
Lj0g3v0171409.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514935|ref|XP_003526157.1| chr0 82161320 82169128 -
2 domain predictions
1 GO term
Lj0g3v0171409.2
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 82167278 82169128 -
2 domain predictions
1 GO term
Lj0g3v0193869.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 94633989 94636695 +
2 domain predictions
1 GO term
Lj0g3v0211449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502171796|ref|XP_004515104.1| chr0 106530167 106534430 +
2 domain predictions
1 GO term
Lj0g3v0228499.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase SD1-8-like [Glycine max] gi|356546692|ref|XP_003541757.1| chr0 118117646 118118645 +
2 domain predictions
1 GO term
Lj0g3v0247749.1
n.a. PREDICTED: PAN domain-containing protein At5g03700-like [Cicer arietinum] gi|502111715|ref|XP_004494144.1| chr0 128435286 128437794 +
2 domain predictions
1 GO term
Lj0g3v0249629.1
n.a. receptor-like protein kinase precusor-like protein [Glycine max] gi|351726734|ref|NP_001235345.1| chr0 129398972 129399835 +
2 domain predictions
1 GO term
Lj0g3v0252549.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2-like [Cicer arietinum] gi|502157130|ref|XP_004510769.1| chr0 130962861 130966414 +
2 domain predictions
1 GO term
Lj0g3v0257449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502124903|ref|XP_004498719.1| chr0 133648660 133651802 -
2 domain predictions
1 GO term
Lj0g3v0309109.1
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr0 161457127 161460340 +
2 domain predictions
1 GO term
Lj0g3v0320629.1
n.a. n.a. chr0 167331017 167344608 -
2 domain predictions
1 GO term
Lj0g3v0320639.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 167331537 167332858 +
2 domain predictions
1 GO term
Lj0g3v0320649.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357474863|ref|XP_003607717.1| chr0 167343050 167344851 +
2 domain predictions
1 GO term
Lj0g3v0321379.1
n.a. Kinase-like protein [Medicago truncatula] gi|357453599|ref|XP_003597080.1| chr0 167813329 167813605 +
2 domain predictions
1 GO term
Lj0g3v0321429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502083045|ref|XP_004487351.1| chr0 167819044 167822055 +
2 domain predictions
1 GO term
Lj0g3v0322429.1
n.a. LRR receptor-like serine/threonine-protein kinase HSL2 [Medicago truncatula] gi|357458063|ref|XP_003599312.1| chr0 168406859 168409546 +
2 domain predictions
1 GO term
Lj0g3v0332939.1
n.a. Somatic embryogenesis receptor kinase [Medicago truncatula] gi|357458087|ref|XP_003599324.1| chr0 174230908 174233819 +
2 domain predictions
1 GO term
Lj0g3v0348039.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Glycine max] gi|356517594|ref|XP_003527472.1| chr0 182652330 182655652 +
2 domain predictions
1 GO term
Lj0g3v0354029.1
n.a. n.a. chr0 186433457 186441920 +
2 domain predictions
1 GO term
Lj0g3v0355429.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166655|ref|XP_004513948.1| chr0 187215457 187219003 +
2 domain predictions
1 GO term
Lj0g3v0358399.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357453577|ref|XP_003597066.1| chr0 188648804 188654509 -
2 domain predictions
1 GO term
Lj1g3v1687840.1
n.a. Cysteine-rich receptor-like protein kinase [Medicago truncatula] gi|357465633|ref|XP_003603101.1| chr1 20084740 20087792 -
2 domain predictions
1 GO term
Lj1g3v2033030.1
n.a. S-locus lectin protein kinase family protein isoform 2, partial [Theobroma cacao] gi|508721006|gb|EOY12903.1| chr1 23753092 23756677 +
2 domain predictions
1 GO term
Lj1g3v2611530.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330-like [Glycine max] gi|356524497|ref|XP_003530865.1| chr1 30273486 30276880 -
2 domain predictions
1 GO term
Lj1g3v3020950.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514874|ref|XP_003526127.1| chr1 34258373 34259829 +
2 domain predictions
1 GO term
Lj1g3v3020960.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514874|ref|XP_003526127.1| chr1 34258373 34261174 +
2 domain predictions
1 GO term
Lj1g3v4275470.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1-like [Glycine max] gi|356504803|ref|XP_003521184.1| chr1 50298942 50302843 -
2 domain predictions
1 GO term
Lj1g3v4485310.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514911|ref|XP_003526145.1| chr1 52814272 52815330 +
2 domain predictions
1 GO term
Lj1g3v4696560.1
n.a. PREDICTED: PAN domain-containing protein At5g03700-like [Cicer arietinum] gi|502111715|ref|XP_004494144.1| chr1 55972032 55974012 +
2 domain predictions
1 GO term
Lj2g3v1550250.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr2 24633936 24636365 -
2 domain predictions
1 GO term
Lj3g3v0685950.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514866|ref|XP_003526123.1| chr3 7565909 7570099 +
2 domain predictions
1 GO term
Lj3g3v0686990.1
n.a. n.a. chr3 7584149 7588663 -
2 domain predictions
1 GO term
Lj3g3v0697000.3
n.a. Serine/threonine protein kinase [Medicago truncatula] gi|357452493|ref|XP_003596523.1| chr3 7593077 7595300 +
2 domain predictions
1 GO term
Lj3g3v2887070.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514870|ref|XP_003526125.1| chr3 35611650 35614021 +
2 domain predictions
1 GO term
Lj3g3v2887090.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356514876|ref|XP_003526128.1| chr3 35626507 35627893 +
2 domain predictions
1 GO term
Lj3g3v2887190.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130-like [Cicer arietinum] gi|502165385|ref|XP_004513556.1| chr3 35653399 35656512 -
2 domain predictions
1 GO term
Lj3g3v2888260.1
n.a. n.a. chr3 35690440 35700132 -
2 domain predictions
1 GO term
Lj3g3v2888270.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum] gi|502165379|ref|XP_004513553.1| chr3 35692151 35699684 +
2 domain predictions
1 GO term
Lj3g3v2888270.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Cicer arietinum] gi|502165379|ref|XP_004513553.1| chr3 35692151 35699684 +
2 domain predictions
1 GO term
Lj3g3v2888290.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230-like [Glycine max] gi|356544860|ref|XP_003540865.1| chr3 35706091 35711245 +
2 domain predictions
1 GO term
Lj3g3v3375730.1
n.a. CM0216.590.nc [Lotus japonicus] gi|164605527|dbj|BAF98593.1| chr3 41496565 41500650 -
2 domain predictions
1 GO term
Lj3g3v3375730.3
n.a. S-receptor kinase-like protein 3 [Lotus japonicus] gi|33945886|emb|CAE45596.1| chr3 41497860 41499486 -
2 domain predictions
1 GO term
Lj3g3v3375750.1
n.a. CM0216.570.nc [Lotus japonicus] gi|164605525|dbj|BAF98591.1| chr3 41501610 41512530 -
2 domain predictions
1 GO term