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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001382
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 18 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.603s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2055490.1
n.a. PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Glycine max] gi|356523060|ref|XP_003530160.1| chr3 26436870 26443505 -
5 domain predictions
3 GO terms
Lj4g3v1559440.1
n.a. PREDICTED: probable alpha-mannosidase I MNS5-like [Glycine max] gi|356562767|ref|XP_003549640.1| chr4 23170798 23176706 -
5 domain predictions
3 GO terms
Lj4g3v1559440.2
n.a. PREDICTED: probable alpha-mannosidase I MNS5-like [Glycine max] gi|356562767|ref|XP_003549640.1| chr4 23170798 23176855 -
4 domain predictions
3 GO terms
Lj4g3v1983210.1
n.a. PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Cicer arietinum] gi|502150329|ref|XP_004507901.1| chr4 27470831 27474447 +
5 domain predictions
3 GO terms
Lj4g3v1983210.2
n.a. PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Cicer arietinum] gi|502150329|ref|XP_004507901.1| chr4 27470831 27474447 +
5 domain predictions
3 GO terms
Lj4g3v2139300.1
n.a. Mannosyl-oligosaccharide 1 2-alpha-mannosidase [Medicago truncatula] gi|357479517|ref|XP_003610044.1| chr4 29416165 29422943 +
5 domain predictions
3 GO terms
Lj5g3v1206610.1
n.a. PREDICTED: probable alpha-mannosidase I MNS4-like [Glycine max] gi|356535347|ref|XP_003536208.1| chr5 19402655 19417250 -
5 domain predictions
3 GO terms
Lj6g3v1318420.1
n.a. PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Cicer arietinum] gi|502150329|ref|XP_004507901.1| chr6 15673421 15679487 +
5 domain predictions
3 GO terms
Lj6g3v1934090.1
n.a. Mannosyl-oligosaccharide 1,2-alpha-mannosidase [Medicago truncatula] gi|357447317|ref|XP_003593934.1| chr6 22040166 22044652 -
5 domain predictions
3 GO terms
LotjaGi3g1v0345300.1
n.a. alpha-1,2-Mannosidase; TAIR: AT1G51590.1 alpha-mannosidase 1; Swiss-Prot: sp|Q9C512|MNS1_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1; TrEMBL-Plants: tr|A0A0B2P4M0|A0A0B2P4M0_GLYSO alpha-1,2-Mannosidase; Found in the gene: LotjaGi3g1v0345300 LjG1.1_chr3 72288766 72297261 -
3 domain predictions
3 GO terms
LotjaGi3g1v0345300.2
n.a. alpha-1,2-Mannosidase; TAIR: AT1G51590.1 alpha-mannosidase 1; Swiss-Prot: sp|Q9C512|MNS1_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1; TrEMBL-Plants: tr|I1KGP3|I1KGP3_SOYBN alpha-1,2-Mannosidase; Found in the gene: LotjaGi3g1v0345300 LjG1.1_chr3 72289410 72295575 -
3 domain predictions
3 GO terms
LotjaGi4g1v0237900.1
n.a. alpha-1,2-Mannosidase; TAIR: AT1G27520.1 Glycosyl hydrolase family 47 protein; Swiss-Prot: sp|Q9SXC9|MNS5_ARATH Alpha-mannosidase I MNS5; TrEMBL-Plants: tr|I1MTK9|I1MTK9_SOYBN alpha-1,2-Mannosidase; Found in the gene: LotjaGi4g1v0237900 LjG1.1_chr4 55370535 55376829 +
3 domain predictions
3 GO terms
LotjaGi4g1v0237900.2
n.a. alpha-1,2-Mannosidase; TAIR: AT1G27520.1 Glycosyl hydrolase family 47 protein; Swiss-Prot: sp|Q9SXC9|MNS5_ARATH Alpha-mannosidase I MNS5; TrEMBL-Plants: tr|K7MKS2|K7MKS2_SOYBN alpha-1,2-Mannosidase; Found in the gene: LotjaGi4g1v0237900 LjG1.1_chr4 55370620 55376800 +
3 domain predictions
3 GO terms
LotjaGi4g1v0306400.1
n.a. alpha-1,2-Mannosidase; TAIR: AT1G51590.1 alpha-mannosidase 1; Swiss-Prot: sp|Q9C512|MNS1_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1; TrEMBL-Plants: tr|G7JU96|G7JU96_MEDTR alpha-1,2-Mannosidase; Found in the gene: LotjaGi4g1v0306400 LjG1.1_chr4 68202276 68209145 +
3 domain predictions
3 GO terms
LotjaGi4g1v0306400.2
n.a. alpha-1,2-Mannosidase; TAIR: AT1G51590.1 alpha-mannosidase 1; Swiss-Prot: sp|Q9C512|MNS1_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1; TrEMBL-Plants: tr|G7JU96|G7JU96_MEDTR alpha-1,2-Mannosidase; Found in the gene: LotjaGi4g1v0306400 LjG1.1_chr4 68203623 68208671 +
3 domain predictions
3 GO terms
LotjaGi5g1v0192500.1
n.a. alpha-1,2-Mannosidase; TAIR: AT5G43710.1 Glycosyl hydrolase family 47 protein; Swiss-Prot: sp|Q9FG93|MNS4_ARATH Alpha-mannosidase I MNS4; TrEMBL-Plants: tr|A0A072VMX6|A0A072VMX6_MEDTR alpha-1,2-Mannosidase; Found in the gene: LotjaGi5g1v0192500 LjG1.1_chr5 48582874 48597784 -
3 domain predictions
3 GO terms
LotjaGi5g1v0192500.2
n.a. alpha-1,2-Mannosidase; TAIR: AT5G43710.1 Glycosyl hydrolase family 47 protein; Swiss-Prot: sp|Q9FG93|MNS4_ARATH Alpha-mannosidase I MNS4; TrEMBL-Plants: tr|I1LC43|I1LC43_SOYBN alpha-1,2-Mannosidase; Found in the gene: LotjaGi5g1v0192500 LjG1.1_chr5 48586167 48597733 -
3 domain predictions
3 GO terms
LotjaGi6g1v0308800.1
n.a. alpha-1,2-Mannosidase; TAIR: AT1G30000.1 alpha-mannosidase 3; Swiss-Prot: sp|Q93Y37|MNS3_ARATH Mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS3; TrEMBL-Plants: tr|G7IPW7|G7IPW7_MEDTR alpha-1,2-Mannosidase; Found in the gene: LotjaGi6g1v0308800 LjG1.1_chr6 62609872 62618789 -
3 domain predictions
3 GO terms