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| Field | Value |
|---|---|
| Gene ID | Lj4g3v1983210 |
| Transcript ID | Lj4g3v1983210.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | MG20 v3.0 |
| Description | PREDICTED: mannosyl-oligosaccharide 1,2-alpha-mannosidase MNS1-like [Cicer arietinum] gi|502150329|ref|XP_004507901.1| |
| Working Lj name | n.a. |
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 28 | 28 | – | – | |
| PANTHER | 15 | 197 | 183 | 1.30E-111 | – | |
| PANTHER | 15 | 197 | 183 | 1.30E-111 | – | |
| Phobius | 29 | 45 | 17 | – | – | |
| TMHMM | 30 | 45 | 16 | – | – | |
| Phobius | 46 | 199 | 154 | – | – | |
| Coils | 51 | 85 | 35 | – | – | |
| Gene3D | 106 | 197 | 92 | 1.00E-35 | ||
| SUPERFAMILY | 107 | 197 | 91 | 1.70E-34 | ||
| Pfam | 118 | 197 | 80 | 3.10E-29 | ||
| PRINTS | 118 | 138 | 21 | 2.20E-19 | ||
| PRINTS | 151 | 165 | 15 | 2.20E-19 | ||
| PRINTS | 188 | 199 | 12 | 2.20E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Mannosyl-oligosaccharide 1,2-alpha-mannosidase activity | Catalysis of the hydrolysis of the terminal (1->2)-linked alpha-D-mannose residues in an oligo-mannose oligosaccharide. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. |
Expression pattern of Lj4g3v1983210.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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A list of the top 25 highly co-expressed genes of Lj4g3v1983210.1, powered by CORGI.
Loading co-expressed genes from the dataset ljgea-geneid. This will take 20–30 seconds to construct.